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The map label for this gene is csoR [H]

Identifier: 238923023

GI number: 238923023

Start: 559765

End: 560106

Strand: Direct

Name: csoR [H]

Synonym: EUBREC_0613

Alternate gene names: 238923023

Gene position: 559765-560106 (Clockwise)

Preceding gene: 238923020

Following gene: 238923024

Centisome position: 16.23

GC content: 46.2

Gene sequence:

>342_bases
ATGCGGAACAAAGAACAAATGGAGGTAGCCATGACAGAAAAAGAAACCCAATGCTGTTGCTGCAACCGCAAAAAAGAGCG
GTCAGAGAAGGAATATAAGGATCTCATCAACAGACTCAGCCGTATAGAGGGACAGATCCGTGGAATCAAGCGTATGCTGG
ATGAGGATTGCTACTGCCCTGACATCATCACACAGGTGGCGGCCGCAAATGCTGCGCTCAACAGCTTCAATAAAGTCCTT
TTGACCAATCATATAAAGACGTGTGTGGCAGATGACATAAGAGCCGGCAAGGATGAGACAATAGATGAGCTTTTGAACAC
ACTGCAGAAGCTTATGAAGTAG

Upstream 100 bases:

>100_bases
AAGGAAATCTGCCCTTGCAATATACCCCACTGGGGTATATAATACTCTTGAAGACAGATACCCATAAGGGGTATAGTTAG
ACATGTAAAACAAATGCATA

Downstream 100 bases:

>100_bases
TATTATAAGAAGGCAGGTATAAAAATGAGTACAATAATCACAATATTAATAATAGCAATAATTGCCGCTCTGGTAATTGT
GGGCTTAAAGGAGACTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRNKEQMEVAMTEKETQCCCCNRKKERSEKEYKDLINRLSRIEGQIRGIKRMLDEDCYCPDIITQVAAANAALNSFNKVL
LTNHIKTCVADDIRAGKDETIDELLNTLQKLMK

Sequences:

>Translated_113_residues
MRNKEQMEVAMTEKETQCCCCNRKKERSEKEYKDLINRLSRIEGQIRGIKRMLDEDCYCPDIITQVAAANAALNSFNKVL
LTNHIKTCVADDIRAGKDETIDELLNTLQKLMK
>Mature_113_residues
MRNKEQMEVAMTEKETQCCCCNRKKERSEKEYKDLINRLSRIEGQIRGIKRMLDEDCYCPDIITQVAAANAALNSFNKVL
LTNHIKTCVADDIRAGKDETIDELLNTLQKLMK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 13041; Mature: 13041

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKEQMEVAMTEKETQCCCCNRKKERSEKEYKDLINRLSRIEGQIRGIKRMLDEDCYCP
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DIITQVAAANAALNSFNKVLLTNHIKTCVADDIRAGKDETIDELLNTLQKLMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRNKEQMEVAMTEKETQCCCCNRKKERSEKEYKDLINRLSRIEGQIRGIKRMLDEDCYCP
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DIITQVAAANAALNSFNKVLLTNHIKTCVADDIRAGKDETIDELLNTLQKLMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]