| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238922999
Identifier: 238922999
GI number: 238922999
Start: 543907
End: 544383
Strand: Direct
Name: 238922999
Synonym: EUBREC_0588
Alternate gene names: NA
Gene position: 543907-544383 (Clockwise)
Preceding gene: 238922998
Following gene: 238923000
Centisome position: 15.77
GC content: 27.04
Gene sequence:
>477_bases ATGAACTATGATGTTTTAATTAATACTGCAATTGAAAAAAATGAGGTTTTACAGTTATTACGTGGAGAAAAAGAATATGA AGTTATAGTGTCAGAATTTTCACCAGATATTTTTCCAACAGATATCACATCTGTGTTAGTAGAGTGTTTTTATAAGCAGA TTAAAAAGATTGAAAATATTGAAAAGATTTTTACAACAGGACTTGAAAAATTATTATTAGGAGATGCCGGTGATGTTTAT ATAGCAGTGTTATACTTTGATGCTTGTATTTTTCAGGAAGAAAGAAATAAAGCGACTTTTACATTAGACAGAAAAATAAT TGCAGAGAAGATAAGAACAGCACTAAATGAAAAAAAGGAACAATTGCAGGAAAGTGTTACATATAAGAATGGAATGACAA AAAAGAATCCATGGAAAAATATTGAAAATTTTAATAATTACTATTGCAAGAAGTACGACTTTAATATTATTGAATAG
Upstream 100 bases:
>100_bases ATTTTAAGGAATTAGAAGGGGATAGTAAAGAAGATAGATTTCTATTAATGCTAATGAATCATGTATTAGGAGCGATTTCA CAAATAAAAAAAGGAAAATT
Downstream 100 bases:
>100_bases GAGATGGCAAAGAAGATAGATTTCTATTAATGCTAATGAATCATGTACGGTAAGTATTTCCGGGAATAAGCTGTTACTTA AAAATGCAGAGGGGATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNYDVLINTAIEKNEVLQLLRGEKEYEVIVSEFSPDIFPTDITSVLVECFYKQIKKIENIEKIFTTGLEKLLLGDAGDVY IAVLYFDACIFQEERNKATFTLDRKIIAEKIRTALNEKKEQLQESVTYKNGMTKKNPWKNIENFNNYYCKKYDFNIIE
Sequences:
>Translated_158_residues MNYDVLINTAIEKNEVLQLLRGEKEYEVIVSEFSPDIFPTDITSVLVECFYKQIKKIENIEKIFTTGLEKLLLGDAGDVY IAVLYFDACIFQEERNKATFTLDRKIIAEKIRTALNEKKEQLQESVTYKNGMTKKNPWKNIENFNNYYCKKYDFNIIE >Mature_158_residues MNYDVLINTAIEKNEVLQLLRGEKEYEVIVSEFSPDIFPTDITSVLVECFYKQIKKIENIEKIFTTGLEKLLLGDAGDVY IAVLYFDACIFQEERNKATFTLDRKIIAEKIRTALNEKKEQLQESVTYKNGMTKKNPWKNIENFNNYYCKKYDFNIIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18591; Mature: 18591
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYDVLINTAIEKNEVLQLLRGEKEYEVIVSEFSPDIFPTDITSVLVECFYKQIKKIENI CCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EKIFTTGLEKLLLGDAGDVYIAVLYFDACIFQEERNKATFTLDRKIIAEKIRTALNEKKE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH QLQESVTYKNGMTKKNPWKNIENFNNYYCKKYDFNIIE HHHHHHHHHCCCCCCCCCCCHHHHCCCEEEECCCEECC >Mature Secondary Structure MNYDVLINTAIEKNEVLQLLRGEKEYEVIVSEFSPDIFPTDITSVLVECFYKQIKKIENI CCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EKIFTTGLEKLLLGDAGDVYIAVLYFDACIFQEERNKATFTLDRKIIAEKIRTALNEKKE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH QLQESVTYKNGMTKKNPWKNIENFNNYYCKKYDFNIIE HHHHHHHHHCCCCCCCCCCCHHHHCCCEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA