| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is spr [C]
Identifier: 238922963
GI number: 238922963
Start: 510656
End: 511927
Strand: Direct
Name: spr [C]
Synonym: EUBREC_0552
Alternate gene names: 238922963
Gene position: 510656-511927 (Clockwise)
Preceding gene: 238922962
Following gene: 238922964
Centisome position: 14.8
GC content: 45.91
Gene sequence:
>1272_bases ATGAATCAGAAATGGACACGTGCTATATGTACTGTGTTAACATCGGCACTCGTTTTTACAGGACCGGCAGTAGAGGGCAC TACATTTAGCGGATACATAAACAGTGGACTTGAGAAGGTATATGCCAAGACACAGAAGCAGAAGGATGCAGAAAAGAAGA AGTCACAGGCTGAGCAGGATCTCAAGGATAAGAAGAATGAGATTAATGGTTTAAAGGATCAGCAGCAGACTACTGCTGAT GATATAAAGAATAAATCCGCAAAGCTTGATGAGATTCTTGCAGCACAAAAGAAGCTTCAGAAAGATATCACAAATAAACA GGCAGAGATAGAGCAGAATCAGAAGGATCTTGCAGCAGCCCAGGAAAAGCAGCAGGAGCAGTATGACGCCATGAAGAAGC GTATACAGTTCATGTATGAAAACAGCGCTGAAGACAATATCTGGACAGCAATTATTGAGTCAAATGGTATCACAGATATG CTCAATCGTATAGAGTACGTGTCAGATGTATATGATTCGGATCGTGCTCTTATGGATTCTTATCAGGCAGCAGTTGAGCA GGTGAAGGAGATTGGTACTAAGCTTGACAACGACATGAATGAGCTCACAGCCATGCAGGATGACTATGAGAAGCAGCAGG CAGATGTCGAGGCGGCTATAGTAGCTCTTGAAAACCAGAAGGAGCAGTATGCAAGCCAGATAGCTCAGGCACAGCAGCAG GCAGATAATTATCAGAATATCATTACGGCACAGGGCAAAATCATTCAGGAGCAGGAAGCAGCGGCCGCAGCTGCAGCCGC TGCCGCTGCCAGAGCGAACAGCTCGTCAAGCAATTCAAGCTATGATGGTGGTGGAGCCGGCAAGGGCGGAAGTATTGCCA GTGACTATGCATCAGGCGGTGGAAAGAACCCGAGTGCTTCAACAGGAGTTTCAGGAAGCTCTGTGGTATCATACGCTATG CAGTTTGTGGGCAATCCATATGTATGGGGTGGAAACAGTCTTACAAACGGTGTAGACTGTTCAGGCTTTGTACATGAGGT ATATGCACATTTTGGTATCAGCACACCGAGATATTCACAGGCATTTAAGTCTGTGGGACAGGCCGTATCCTTCGATAATA TACAGCCGGGAGACGTAGTGGTATATCCGGGACATGTAGCTATATATGCAGGTGGTGGTGTTATAGTGGAGGCACAGTCC ACAAAGGCAGGAATCACAGCAAACAGAAGCGTACAGTGTCATACAATACTTGCTATACGACGTCTTGTATAG
Upstream 100 bases:
>100_bases AAAAAAGATTCATTTTGTGCAATAATATATCCGAATGTATATTGAACGTAAATTGTGGAAGGAAAGGTCAATCTGACCGT CGTATTACAGGAGGAATAAA
Downstream 100 bases:
>100_bases GATGGTTAGGAGCCGATAAGTATATTTATTATACTTACCGGCTCTTTTTATTTTTACCACAAAGTACTGAATTGTTACCA ATAAAGTAAGGGGCGTAAGA
Product: NLP/P60 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNQKWTRAICTVLTSALVFTGPAVEGTTFSGYINSGLEKVYAKTQKQKDAEKKKSQAEQDLKDKKNEINGLKDQQQTTAD DIKNKSAKLDEILAAQKKLQKDITNKQAEIEQNQKDLAAAQEKQQEQYDAMKKRIQFMYENSAEDNIWTAIIESNGITDM LNRIEYVSDVYDSDRALMDSYQAAVEQVKEIGTKLDNDMNELTAMQDDYEKQQADVEAAIVALENQKEQYASQIAQAQQQ ADNYQNIITAQGKIIQEQEAAAAAAAAAAARANSSSSNSSYDGGGAGKGGSIASDYASGGGKNPSASTGVSGSSVVSYAM QFVGNPYVWGGNSLTNGVDCSGFVHEVYAHFGISTPRYSQAFKSVGQAVSFDNIQPGDVVVYPGHVAIYAGGGVIVEAQS TKAGITANRSVQCHTILAIRRLV
Sequences:
>Translated_423_residues MNQKWTRAICTVLTSALVFTGPAVEGTTFSGYINSGLEKVYAKTQKQKDAEKKKSQAEQDLKDKKNEINGLKDQQQTTAD DIKNKSAKLDEILAAQKKLQKDITNKQAEIEQNQKDLAAAQEKQQEQYDAMKKRIQFMYENSAEDNIWTAIIESNGITDM LNRIEYVSDVYDSDRALMDSYQAAVEQVKEIGTKLDNDMNELTAMQDDYEKQQADVEAAIVALENQKEQYASQIAQAQQQ ADNYQNIITAQGKIIQEQEAAAAAAAAAAARANSSSSNSSYDGGGAGKGGSIASDYASGGGKNPSASTGVSGSSVVSYAM QFVGNPYVWGGNSLTNGVDCSGFVHEVYAHFGISTPRYSQAFKSVGQAVSFDNIQPGDVVVYPGHVAIYAGGGVIVEAQS TKAGITANRSVQCHTILAIRRLV >Mature_423_residues MNQKWTRAICTVLTSALVFTGPAVEGTTFSGYINSGLEKVYAKTQKQKDAEKKKSQAEQDLKDKKNEINGLKDQQQTTAD DIKNKSAKLDEILAAQKKLQKDITNKQAEIEQNQKDLAAAQEKQQEQYDAMKKRIQFMYENSAEDNIWTAIIESNGITDM LNRIEYVSDVYDSDRALMDSYQAAVEQVKEIGTKLDNDMNELTAMQDDYEKQQADVEAAIVALENQKEQYASQIAQAQQQ ADNYQNIITAQGKIIQEQEAAAAAAAAAAARANSSSSNSSYDGGGAGKGGSIASDYASGGGKNPSASTGVSGSSVVSYAM QFVGNPYVWGGNSLTNGVDCSGFVHEVYAHFGISTPRYSQAFKSVGQAVSFDNIQPGDVVVYPGHVAIYAGGGVIVEAQS TKAGITANRSVQCHTILAIRRLV
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000064 [H]
Pfam domain/function: PF00877 NLPC_P60 [H]
EC number: NA
Molecular weight: Translated: 45646; Mature: 45646
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKWTRAICTVLTSALVFTGPAVEGTTFSGYINSGLEKVYAKTQKQKDAEKKKSQAEQD CCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDKKNEINGLKDQQQTTADDIKNKSAKLDEILAAQKKLQKDITNKQAEIEQNQKDLAAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEKQQEQYDAMKKRIQFMYENSAEDNIWTAIIESNGITDMLNRIEYVSDVYDSDRALMDS HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH YQAAVEQVKEIGTKLDNDMNELTAMQDDYEKQQADVEAAIVALENQKEQYASQIAQAQQQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADNYQNIITAQGKIIQEQEAAAAAAAAAAARANSSSSNSSYDGGGAGKGGSIASDYASGG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC GKNPSASTGVSGSSVVSYAMQFVGNPYVWGGNSLTNGVDCSGFVHEVYAHFGISTPRYSQ CCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH AFKSVGQAVSFDNIQPGDVVVYPGHVAIYAGGGVIVEAQSTKAGITANRSVQCHTILAIR HHHHHHHHCCCCCCCCCCEEEECCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHH RLV HHC >Mature Secondary Structure MNQKWTRAICTVLTSALVFTGPAVEGTTFSGYINSGLEKVYAKTQKQKDAEKKKSQAEQD CCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDKKNEINGLKDQQQTTADDIKNKSAKLDEILAAQKKLQKDITNKQAEIEQNQKDLAAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEKQQEQYDAMKKRIQFMYENSAEDNIWTAIIESNGITDMLNRIEYVSDVYDSDRALMDS HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH YQAAVEQVKEIGTKLDNDMNELTAMQDDYEKQQADVEAAIVALENQKEQYASQIAQAQQQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADNYQNIITAQGKIIQEQEAAAAAAAAAAARANSSSSNSSYDGGGAGKGGSIASDYASGG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC GKNPSASTGVSGSSVVSYAMQFVGNPYVWGGNSLTNGVDCSGFVHEVYAHFGISTPRYSQ CCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH AFKSVGQAVSFDNIQPGDVVVYPGHVAIYAGGGVIVEAQSTKAGITANRSVQCHTILAIR HHHHHHHHCCCCCCCCCCEEEECCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHH RLV HHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]