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The map label for this gene is ganQ [H]

Identifier: 238922955

GI number: 238922955

Start: 504095

End: 504982

Strand: Direct

Name: ganQ [H]

Synonym: EUBREC_0544

Alternate gene names: 238922955

Gene position: 504095-504982 (Clockwise)

Preceding gene: 238922954

Following gene: 238922956

Centisome position: 14.61

GC content: 40.09

Gene sequence:

>888_bases
ATGAGTAGTGTAGCAAAAGCAAAAAAACCTATGTCTGCCGGACGTGCTAAGAAAGTAGCAAAGAATTCCCTTGTTCATAT
CATTCTTGGAATACTTGCTGTAGTATGGTTGTTCCCAATTTTCTGGATTATTATGACAAGCTTTAGAGCTGAGAGTGGTG
CTTATACAAAGTACTTCTTCCCACATGGCCTTACATTTAGCAACTATACAAGGCTGTTTACAGAGACTACACTGTTGAAC
TTCCCGAGAGCATTTTTTAATACACTGTTTATTTCAGTGATCTCATGTATCATTTCAACAGTATTTGTACTTTCTGTTGC
GTATAGTATGTCACGACTGAGATTTAAGATGCGTAAGCCTTTCATGAATCTGGCTATGATTCTTGGATTGTTCCCAGCCT
TCATGTCAATGGTTGCCGTATACTTTATCTTAAAGGCTATCGGACTTACAGAGGGAAGTATGCTTCGCCTTTCATTGATT
CTCATATACTCAGCAGGAGCAGGAACAGGCTTCTATATCGCAAAGGGATTCTTTGATACTGTGCCTAAGTCTCTTACTGA
GGCGGCTATCCTTGACGGATGTACACAGTTCCAGGTATTTTACAAGGTTATCCTGCCACTCAGTAAGCCAATCGTAGTAT
ATACAGTACTTACAGCATTCCTTGCTCCATGGCTTGATTTCGTATTTGTAAGGGTTATCGTTGGTCCAAACGACAAGTAT
TGGACAGTATCTCTTCTCCTTTACAACATGCTTGAGAAAGAGTTTATAAACGGATGGTTCACAAGATGGGCTGCTGCTGC
AGTTATTGTATCAATACCTATCTCAATACTTTTCGTTATCATGCAGAGATTCTACGTGGATGGACTTACAGGAGCTGTCA
AAGGCTAA

Upstream 100 bases:

>100_bases
GTGCCGTTATCGGTATCCTCACATTCATTGTACTTTCTATCGTAGCGCTTGTTACATACAGAAATACAAAATCATACAAG
GATGAGGAGGGATTCATGTA

Downstream 100 bases:

>100_bases
TTTGGTTTTATTTAGGCCGCTGCACTTTTGTGCGGCGGCTTTTGGTTTATATTGGGTTGTGGCAAACTTTGGGGGTGTGT
GGCAAACTTAGCACTTTCAG

Product: putative sugar ABC transport system membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSSVAKAKKPMSAGRAKKVAKNSLVHIILGILAVVWLFPIFWIIMTSFRAESGAYTKYFFPHGLTFSNYTRLFTETTLLN
FPRAFFNTLFISVISCIISTVFVLSVAYSMSRLRFKMRKPFMNLAMILGLFPAFMSMVAVYFILKAIGLTEGSMLRLSLI
LIYSAGAGTGFYIAKGFFDTVPKSLTEAAILDGCTQFQVFYKVILPLSKPIVVYTVLTAFLAPWLDFVFVRVIVGPNDKY
WTVSLLLYNMLEKEFINGWFTRWAAAAVIVSIPISILFVIMQRFYVDGLTGAVKG

Sequences:

>Translated_295_residues
MSSVAKAKKPMSAGRAKKVAKNSLVHIILGILAVVWLFPIFWIIMTSFRAESGAYTKYFFPHGLTFSNYTRLFTETTLLN
FPRAFFNTLFISVISCIISTVFVLSVAYSMSRLRFKMRKPFMNLAMILGLFPAFMSMVAVYFILKAIGLTEGSMLRLSLI
LIYSAGAGTGFYIAKGFFDTVPKSLTEAAILDGCTQFQVFYKVILPLSKPIVVYTVLTAFLAPWLDFVFVRVIVGPNDKY
WTVSLLLYNMLEKEFINGWFTRWAAAAVIVSIPISILFVIMQRFYVDGLTGAVKG
>Mature_294_residues
SSVAKAKKPMSAGRAKKVAKNSLVHIILGILAVVWLFPIFWIIMTSFRAESGAYTKYFFPHGLTFSNYTRLFTETTLLNF
PRAFFNTLFISVISCIISTVFVLSVAYSMSRLRFKMRKPFMNLAMILGLFPAFMSMVAVYFILKAIGLTEGSMLRLSLIL
IYSAGAGTGFYIAKGFFDTVPKSLTEAAILDGCTQFQVFYKVILPLSKPIVVYTVLTAFLAPWLDFVFVRVIVGPNDKYW
TVSLLLYNMLEKEFINGWFTRWAAAAVIVSIPISILFVIMQRFYVDGLTGAVKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=32.093023255814, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787571, Length=271, Percent_Identity=26.9372693726937, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33134; Mature: 33003

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure 
SSVAKAKKPMSAGRAKKVAKNSLVHIILGILAVVWLFPIFWIIMTSFRAESGAYTKYFF
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PHGLTFSNYTRLFTETTLLNFPRAFFNTLFISVISCIISTVFVLSVAYSMSRLRFKMRKP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMNLAMILGLFPAFMSMVAVYFILKAIGLTEGSMLRLSLILIYSAGAGTGFYIAKGFFDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHH
VPKSLTEAAILDGCTQFQVFYKVILPLSKPIVVYTVLTAFLAPWLDFVFVRVIVGPNDKY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
WTVSLLLYNMLEKEFINGWFTRWAAAAVIVSIPISILFVIMQRFYVDGLTGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]