| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922918
Identifier: 238922918
GI number: 238922918
Start: 470136
End: 470576
Strand: Direct
Name: 238922918
Synonym: EUBREC_0506
Alternate gene names: NA
Gene position: 470136-470576 (Clockwise)
Preceding gene: 238922915
Following gene: 238922919
Centisome position: 13.63
GC content: 41.5
Gene sequence:
>441_bases ATGAAATTTAACTTTGAGTTTGCAGAGAAGATTTCGCGAACCTACAGCGATGAGTGCAGACCACTGTGCCATGAGCTGAA GCTTCCGCAGACAGCCTTTGATATACTCATGTTTCTGGCGAACAATCCGGAATATAAGACGGCAAGGGATATAGTTGAAA TAAGAAAAATCAAGGCAAATCTTGTGTCTGTAAATGTTGATAAGCTTGTGAATGAAGGCTATCTGGAGAGAAAACCTGTG GAAAATGATAGGAGGAAGACGGAGCTTGTCTGTACAAAAAAGGCCGGGACTGTCATTGAAAGAGGAAGGCGTATACAGCA GCAGTTTACAGCAAATCTGTTTGCAGGGATAGATGAGGAGCAGAAAAAGCAGCTGACGATTGTTATGGAACAGCTTGAGA ATAATATGGATGAAATAATCAGGAGGAAATCACACAAATGA
Upstream 100 bases:
>100_bases GACAAAATGACAGAGAGATATATAATTAGTTCAAAAATGAATAATTCAAAAATGTATAACGAAGCAGCAAAATAGGAAAA GAAAAGAAGGAATATCACAT
Downstream 100 bases:
>100_bases GCACATTAATAACTATAATAGTAACATTTTTTGCCGGTATGGGCGCAGGCCTTGGAACCGGCTTTGCGGGACTAAGCGCA GCAGCAGTAATAAGCCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKFNFEFAEKISRTYSDECRPLCHELKLPQTAFDILMFLANNPEYKTARDIVEIRKIKANLVSVNVDKLVNEGYLERKPV ENDRRKTELVCTKKAGTVIERGRRIQQQFTANLFAGIDEEQKKQLTIVMEQLENNMDEIIRRKSHK
Sequences:
>Translated_146_residues MKFNFEFAEKISRTYSDECRPLCHELKLPQTAFDILMFLANNPEYKTARDIVEIRKIKANLVSVNVDKLVNEGYLERKPV ENDRRKTELVCTKKAGTVIERGRRIQQQFTANLFAGIDEEQKKQLTIVMEQLENNMDEIIRRKSHK >Mature_146_residues MKFNFEFAEKISRTYSDECRPLCHELKLPQTAFDILMFLANNPEYKTARDIVEIRKIKANLVSVNVDKLVNEGYLERKPV ENDRRKTELVCTKKAGTVIERGRRIQQQFTANLFAGIDEEQKKQLTIVMEQLENNMDEIIRRKSHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17190; Mature: 17190
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNFEFAEKISRTYSDECRPLCHELKLPQTAFDILMFLANNPEYKTARDIVEIRKIKAN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LVSVNVDKLVNEGYLERKPVENDRRKTELVCTKKAGTVIERGRRIQQQFTANLFAGIDEE HHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH QKKQLTIVMEQLENNMDEIIRRKSHK HHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MKFNFEFAEKISRTYSDECRPLCHELKLPQTAFDILMFLANNPEYKTARDIVEIRKIKAN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LVSVNVDKLVNEGYLERKPVENDRRKTELVCTKKAGTVIERGRRIQQQFTANLFAGIDEE HHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH QKKQLTIVMEQLENNMDEIIRRKSHK HHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA