| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is manR [H]
Identifier: 238922768
GI number: 238922768
Start: 321013
End: 323034
Strand: Direct
Name: manR [H]
Synonym: EUBREC_0356
Alternate gene names: 238922768
Gene position: 321013-323034 (Clockwise)
Preceding gene: 238922767
Following gene: 238922769
Centisome position: 9.31
GC content: 47.18
Gene sequence:
>2022_bases ATGCTTTCAGAAAAGGGATTATTGATAATTGAAAAGCTGGCAGAGCACAACAATGAGCTTGTCACATCAAAGGCTCTTGC TGCGTCCACAGGTATGTCGGAGCGAAGTGTGAAGACATATCTGAAGGAGGTGGCTGATTTTTGTGAGCAAAACTCTATGA CGCTCGACAGAAAGCCGGGCAAAGGCATGAAGCCGTGCTTTAGCGATGCGCAGATAGGAAAGATTCTGGATGTGGCAGGG CGGAAATCGGCAGCAGTATCGCAGAAGAAGAGACAGAACTACATATCGTATATTCTGCTAAGTGGCTGGGATACATACAC GTATGCGCTTTTTTCGGAGGAGTTAAACGTCAGCAAAAATGTCATCATGGATGATATAAATGAGCTTGACGCAGAGCTTC TGCTCTTTGGCATTAAGGTGCACAGAACGGCGGGTTACGGAATATATGCGACAGGCAGTGAGCTTGATATCAGAAAAGCC ATGAGGCATTTCTGCAGGTATCCAATCAGTGATAAGCAGGTTATCAAGACCGATGACCACAGGCTTTCAAGACGCGCGGC CGAGGTGATAGCCAATAATTTCAGAAGCGTAAATCTGTCGATGGCAGTTGACATGATACATCATGTGGAGAGACGCTTTG ATATCATCTTTACGGATTACACATTTCAGATGCTGGCAGAGTATATAGCCATTGCACTTTTCAGGGTGGATGTGGAGAAG GAACTGAAAACGGATGAGTTAGATCTGTCGAACCGAATATGTGATGCTGCAAGTGATGGGGATGCGGGCACCGAAACAGA GCAGCAGGTACAGAAAAATGGATTCGTAATGATAGAGCATGAGAACATGGCAAAGGAGGCAGCAGGCTTTCTGGAAAGAC ATCACGGCATCAGCCTCTCACAGCCTGAAATCATGTATCTGGCAATGCTTTTTTCCTGTGCCGAGGGACAAAACCGCGTT GTCATGTCCTGTGAGGAGGCGCTTAGCATAGAGGATGAGATGATAGTGTATCTGTCAAATCTTCTCGCTGCCAATCTGAT TGAAAATGAGCTTCTACGTGAGAGCATGCGTAGCTTTTTACCGGGCTCCATTGCGAGGACTCATTTTGGCATAGAGATAG ACAATCCGTTTCTTTCCGATATCACACAATCGTATGCCAGTCTCTTTACGGTATGTTTTACAGTATCGAGATACTACGAA AAGTACACAGGCGCCATGCCGAGCGAGAATGAGATAGCTTTTATTGCCTTGCAGGTGGGCGGAGCCCTGCACAGAAATCC TATGACAGTGCGCGCAGTGTTAATCGGTGCAGCAGGCTATGCGACCGGCAGCATAATAGCGGGCAAAATAGAAAACAGAG TGCCGGATGTAAGGATAGTAAGCATTTTGTCGTCAGACCGCATAGAGCATATTGACGAGTATGACTGCGACCTCATACTC TCGACCATAGACACACGGGCAGATATCCACAAGGATATGAGATTTCTGTATGTTTCTCCACTAATCAGTGCGCAGGATGA GAAAAATATCAGAAACAAGTGCTTTGAGCTCATGACCGGCCAGAGCGCGGAGGTCAGCGAGTTTTCACAGATGCTGTCGG AGGAATTTATCATATTTGAGAAAAAGGCGAAAAACCGCAAGGATGTTTTAAAGCGCGCGTGCCAGCTTCTCATAAACAAA GGAATAGTGCAGAGCGAGTTTGCGAGGGATGTACTGGAGCGTGAGAAGGTGGAGGCAACCGCTGTGGGCTGCAATATAGC CATACCGCACGGAAAGCCTGAGCATGTAAACCGCTGCCAGATACTTGTTATACGTCTCGACAAGCCGATAGAGTGGGGCG AGAGGATGGCAGACATGATATTTCTGCTTGCGATAAACTTTGACAGTGTCAACACGACAAAGGCATTTTTCCATGATTTC ACAAAGCTTCTGAATGAAAATGGAGCGACTGACAGGCTCAGGGAGGCTGCTTCACCTCATGAGCTTTGTGCAGCTATCCG GAAAGAGCTGGGGTGGAACTGA
Upstream 100 bases:
>100_bases CTTCAGGGACGTAGAGTTTTTGAAGGAGCATGGTGCAACAAATCTGATAGATGAACCGGTCGAATTGTTAAATTACGTAT AATCAGGAGAACTTTGATTT
Downstream 100 bases:
>100_bases ATATCACATTAATACAAAATTGCACCAGAGATGGTGCAATTTTGCATTTTGGGGAATATTGAAAAAACTCATACCGCACA GTACAATAAAACCATAGAAA
Product: PRD/PTS system IIA 2 domain protein
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSMTLDRKPGKGMKPCFSDAQIGKILDVAG RKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSKNVIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKA MRHFCRYPISDKQVIKTDDHRLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEK ELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLSQPEIMYLAMLFSCAEGQNRV VMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSFLPGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYE KYTGAMPSENEIAFIALQVGGALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLIL STIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIFEKKAKNRKDVLKRACQLLINK GIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRCQILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDF TKLLNENGATDRLREAASPHELCAAIRKELGWN
Sequences:
>Translated_673_residues MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSMTLDRKPGKGMKPCFSDAQIGKILDVAG RKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSKNVIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKA MRHFCRYPISDKQVIKTDDHRLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEK ELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLSQPEIMYLAMLFSCAEGQNRV VMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSFLPGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYE KYTGAMPSENEIAFIALQVGGALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLIL STIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIFEKKAKNRKDVLKRACQLLINK GIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRCQILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDF TKLLNENGATDRLREAASPHELCAAIRKELGWN >Mature_673_residues MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSMTLDRKPGKGMKPCFSDAQIGKILDVAG RKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSKNVIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKA MRHFCRYPISDKQVIKTDDHRLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEK ELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLSQPEIMYLAMLFSCAEGQNRV VMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSFLPGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYE KYTGAMPSENEIAFIALQVGGALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLIL STIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIFEKKAKNRKDVLKRACQLLINK GIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRCQILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDF TKLLNENGATDRLREAASPHELCAAIRKELGWN
Specific function: May regulate the expression of the mannose operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2 [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 75931; Mature: 75931
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSMTLDRKPG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCC KGMKPCFSDAQIGKILDVAGRKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSKN CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEEEHHHCCCCHH VIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKAMRHFCRYPISDKQVIKTDDH HHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHH RLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEK HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCHHH ELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLS HCCCCHHCHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCC QPEIMYLAMLFSCAEGQNRVVMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSFL CCHHHHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYEKYTGAMPSENEIAFIALQVG CCCHHHHEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC GALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLIL CCCCCCCCEEEHEEEECCCCCCCCEEECHHHCCCCCEEEEHHHHHHHHHHCCCCCHHHHH STIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIFE HHHHHHHHHHHHHHHHEECCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEE KKAKNRKDVLKRACQLLINKGIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRCQ HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEE ILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDFTKLLNENGATDRLREAASPH EEEEEECCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHH ELCAAIRKELGWN HHHHHHHHHHCCC >Mature Secondary Structure MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSMTLDRKPG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCC KGMKPCFSDAQIGKILDVAGRKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSKN CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEEEHHHCCCCHH VIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKAMRHFCRYPISDKQVIKTDDH HHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHH RLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEK HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCHHH ELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLS HCCCCHHCHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCC QPEIMYLAMLFSCAEGQNRVVMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSFL CCHHHHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYEKYTGAMPSENEIAFIALQVG CCCHHHHEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC GALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLIL CCCCCCCCEEEHEEEECCCCCCCCEEECHHHCCCCCEEEEHHHHHHHHHHCCCCCHHHHH STIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIFE HHHHHHHHHHHHHHHHEECCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEE KKAKNRKDVLKRACQLLINKGIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRCQ HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEE ILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDFTKLLNENGATDRLREAASPH EEEEEECCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHH ELCAAIRKELGWN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]