| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922642
Identifier: 238922642
GI number: 238922642
Start: 203580
End: 204695
Strand: Direct
Name: 238922642
Synonym: EUBREC_0217
Alternate gene names: NA
Gene position: 203580-204695 (Clockwise)
Preceding gene: 238922641
Following gene: 238922643
Centisome position: 5.9
GC content: 44.89
Gene sequence:
>1116_bases ATGACATTTGGCTTGTTGAGGCAGATTTATGAGAAAATCGCGAACATCGGGAAACAAACACTTCACAAAGAAAGTGAGGA ATTCAATATGAAAAAGAAAGTATTATCAGTAATTTTAGCAGCAGTTTGCACCATGGGCCTTATGGCAGGCTGTGGAGCAG AGGGGTCAAAGGGATCTACACAGAGTGGCTCAAAGGGTGACAGCTACACAGTAGGTATTTCGCAGTTTGCAGAGCATGGC TCTCTTGACAACTGCAGGGAGGGCTTCTTAGAGGGCCTCAAGGAAGAGGGCATCGAGGAAGGTAAAAACCTTAAGGTTGA TTACCAGAATGCACAGACAGATACCGGTACAGCAAGCACTATTGCAGACAGCTTCGTATCTGAGAAGGTTGATATGATTT GTGCCATCGCTACACCATGTGCAGCCAGCGCCTACAATTCAGCTATGAATGCAGACATTCCAACAGTATACACAGCAGTT TCAGATCCTGTTGTAGCAGGTCTTGCTAAGGAGGATGGCTCAAGTGTCGGAAACATCACAGGCTCATCAGACGTGCTTCC TGTTGAGGAGCAGCTTAAGATGATCAGGGAGATGATGCCGGATGCAAAGAAAATCGGTATTCTCTACACCACAAGTGAGG CAAACTCATGCAGCACCATTGAGGAGTACAAGGAGCTTGCAGATAAATACGATTTTGAAATCGTTGACACCGGAATAAAC ACATCAGCAGATATTGAGATTGCAGCATCAGATCTTGTTTCCAAGGTTGACTGCCTGTGCAACCTCACAGACAACACAGT AGTAAATGCACTCCAGACTGTTCTTGACAAGGCAAATGGAGCAAAGATTCCGGTATTCGGAAGTGAAATTGAGCAGGTTA AATCAGGCTGTGTCGCTTCAATGGGAATCGATTACTACCAGCTTGGAATCGAGACAGGAAAGATGGCAGCAAAGATTTTA AAGGGTGAGGAGAAAGCCTCTGACACTCCGTTTATCACAGCTTCAAAGGCAGAGCTTTATGTAAACACTGCAGCAGCAGA CAAGGTTGGCATGACACTTGATGCAGATTATATCAAGGATGCAGCCGAGACATTTGATAAGATTGAAGTAAAATAG
Upstream 100 bases:
>100_bases TAATAAGAATTTATTACCGTCTCAAGCATTAGCTTGAGGCGGTTTTTTGCATAAACACCCACATGATGAAATATCGTTAG CGCAAATTTGATTTGAGGCT
Downstream 100 bases:
>100_bases TTACGTTGATTTTTAAAGCAGGGGAGGATACACCGTGACACTAGTTTTAAGCGTTTTAGAGCAGGGCATGATTTATGCGA TCATGGCTCTTGGAATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTFGLLRQIYEKIANIGKQTLHKESEEFNMKKKVLSVILAAVCTMGLMAGCGAEGSKGSTQSGSKGDSYTVGISQFAEHG SLDNCREGFLEGLKEEGIEEGKNLKVDYQNAQTDTGTASTIADSFVSEKVDMICAIATPCAASAYNSAMNADIPTVYTAV SDPVVAGLAKEDGSSVGNITGSSDVLPVEEQLKMIREMMPDAKKIGILYTTSEANSCSTIEEYKELADKYDFEIVDTGIN TSADIEIAASDLVSKVDCLCNLTDNTVVNALQTVLDKANGAKIPVFGSEIEQVKSGCVASMGIDYYQLGIETGKMAAKIL KGEEKASDTPFITASKAELYVNTAAADKVGMTLDADYIKDAAETFDKIEVK
Sequences:
>Translated_371_residues MTFGLLRQIYEKIANIGKQTLHKESEEFNMKKKVLSVILAAVCTMGLMAGCGAEGSKGSTQSGSKGDSYTVGISQFAEHG SLDNCREGFLEGLKEEGIEEGKNLKVDYQNAQTDTGTASTIADSFVSEKVDMICAIATPCAASAYNSAMNADIPTVYTAV SDPVVAGLAKEDGSSVGNITGSSDVLPVEEQLKMIREMMPDAKKIGILYTTSEANSCSTIEEYKELADKYDFEIVDTGIN TSADIEIAASDLVSKVDCLCNLTDNTVVNALQTVLDKANGAKIPVFGSEIEQVKSGCVASMGIDYYQLGIETGKMAAKIL KGEEKASDTPFITASKAELYVNTAAADKVGMTLDADYIKDAAETFDKIEVK >Mature_370_residues TFGLLRQIYEKIANIGKQTLHKESEEFNMKKKVLSVILAAVCTMGLMAGCGAEGSKGSTQSGSKGDSYTVGISQFAEHGS LDNCREGFLEGLKEEGIEEGKNLKVDYQNAQTDTGTASTIADSFVSEKVDMICAIATPCAASAYNSAMNADIPTVYTAVS DPVVAGLAKEDGSSVGNITGSSDVLPVEEQLKMIREMMPDAKKIGILYTTSEANSCSTIEEYKELADKYDFEIVDTGINT SADIEIAASDLVSKVDCLCNLTDNTVVNALQTVLDKANGAKIPVFGSEIEQVKSGCVASMGIDYYQLGIETGKMAAKILK GEEKASDTPFITASKAELYVNTAAADKVGMTLDADYIKDAAETFDKIEVK
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007487 [H]
Pfam domain/function: PF04392 ABC_sub_bind [H]
EC number: NA
Molecular weight: Translated: 39433; Mature: 39302
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFGLLRQIYEKIANIGKQTLHKESEEFNMKKKVLSVILAAVCTMGLMAGCGAEGSKGST CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QSGSKGDSYTVGISQFAEHGSLDNCREGFLEGLKEEGIEEGKNLKVDYQNAQTDTGTAST CCCCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH IADSFVSEKVDMICAIATPCAASAYNSAMNADIPTVYTAVSDPVVAGLAKEDGSSVGNIT HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCC GSSDVLPVEEQLKMIREMMPDAKKIGILYTTSEANSCSTIEEYKELADKYDFEIVDTGIN CCCCCCCHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCC TSADIEIAASDLVSKVDCLCNLTDNTVVNALQTVLDKANGAKIPVFGSEIEQVKSGCVAS CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHH MGIDYYQLGIETGKMAAKILKGEEKASDTPFITASKAELYVNTAAADKVGMTLDADYIKD CCCCHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEECHHHHHH AAETFDKIEVK HHHHHHHCCCC >Mature Secondary Structure TFGLLRQIYEKIANIGKQTLHKESEEFNMKKKVLSVILAAVCTMGLMAGCGAEGSKGST CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QSGSKGDSYTVGISQFAEHGSLDNCREGFLEGLKEEGIEEGKNLKVDYQNAQTDTGTAST CCCCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH IADSFVSEKVDMICAIATPCAASAYNSAMNADIPTVYTAVSDPVVAGLAKEDGSSVGNIT HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCC GSSDVLPVEEQLKMIREMMPDAKKIGILYTTSEANSCSTIEEYKELADKYDFEIVDTGIN CCCCCCCHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCC TSADIEIAASDLVSKVDCLCNLTDNTVVNALQTVLDKANGAKIPVFGSEIEQVKSGCVAS CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHH MGIDYYQLGIETGKMAAKILKGEEKASDTPFITASKAELYVNTAAADKVGMTLDADYIKD CCCCHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEECHHHHHH AAETFDKIEVK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]