| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922638
Identifier: 238922638
GI number: 238922638
Start: 199590
End: 200495
Strand: Direct
Name: 238922638
Synonym: EUBREC_0213
Alternate gene names: NA
Gene position: 199590-200495 (Clockwise)
Preceding gene: 238922637
Following gene: 238922641
Centisome position: 5.79
GC content: 27.37
Gene sequence:
>906_bases ATGAATAATGTTACCAAAATGGAATTATACAAAGTTCTTTCAAAACCTCAGGTATATATAATTTTTGTTGTTGGACTAAT TATTCAAAGCATCATGGCGGGACAGATGAGAACAACTATGTTTAATGGATATCATAAGTCTGTGTATGAAAATTATATGA ATGAAATGGAAGGCGAATATTCAATTGAAAAAAAAGAATACATCAATTCAGAATATCAGAAATTCCAAGCTATTATCGAT GATAAGCAAAAGAATGAAATTGCATTTAATAATGGCAAAATAGATGGTAAGGATTATCATTCTATAATCAACGAAGAAAA GAAAGCTCAATATAGAATAGCAACTGTCAAATACATTGTTGAGAAAACAGAGTATTATGATAGTCTGGATAAAAGTGCAC AATATTTTTATGATATTGAAATAAGTGATTATATTGAAAATTTGAGGTTTAATGTTATACCGATAATAGTTATTCTATTG ATTGTGGTACCTATGTATACAGATGATATATATGCAGGAACATTAGCTATGATTAAATCATCTAAAAATGGAAGAATGAT ATTGTTAAAATCGCGGCTGAACATTAGTTTATTAATTTCGTTGTTGATATGTATATTATTTGCATTTGTTGAATTTGTGA CAAAGTACATTATATTTGATTTAGGAAATCTGAATGCAGGGGTTGAAAGTCTGATGATTGAGAGGACTATGCATTTACCA TATATTATATCGGACTTGTCTATATGGCAATTTATTGTTTTATTATATCTGTTCTATCTTATAATCTCGGTTATGATTAG CATAATTGGTTTATTAGTTTCTAAAATATCACGAGGAAATATAGAAGCATTTTCAATAATGAGCGTTATTATTGTAGGTG TTTCGTATATTTTAAATATTTTGTGA
Upstream 100 bases:
>100_bases TCAACACATATTTTATCAGACGTAGAGGAAGTGGCTGACTATATAATATTGATTAAAGAAGGATGTCTGACAAAATTTGA GAAGATTGGTGGGAAGGATA
Downstream 100 bases:
>100_bases CTGATATGTAATGACTTTTCAATAAAGAGACTGAATATGACGTTTGCAGACTTTGAAAGGGCGATGCAAAAGGCGGGATA CAAGCTCTAATCAACCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNNVTKMELYKVLSKPQVYIIFVVGLIIQSIMAGQMRTTMFNGYHKSVYENYMNEMEGEYSIEKKEYINSEYQKFQAIID DKQKNEIAFNNGKIDGKDYHSIINEEKKAQYRIATVKYIVEKTEYYDSLDKSAQYFYDIEISDYIENLRFNVIPIIVILL IVVPMYTDDIYAGTLAMIKSSKNGRMILLKSRLNISLLISLLICILFAFVEFVTKYIIFDLGNLNAGVESLMIERTMHLP YIISDLSIWQFIVLLYLFYLIISVMISIIGLLVSKISRGNIEAFSIMSVIIVGVSYILNIL
Sequences:
>Translated_301_residues MNNVTKMELYKVLSKPQVYIIFVVGLIIQSIMAGQMRTTMFNGYHKSVYENYMNEMEGEYSIEKKEYINSEYQKFQAIID DKQKNEIAFNNGKIDGKDYHSIINEEKKAQYRIATVKYIVEKTEYYDSLDKSAQYFYDIEISDYIENLRFNVIPIIVILL IVVPMYTDDIYAGTLAMIKSSKNGRMILLKSRLNISLLISLLICILFAFVEFVTKYIIFDLGNLNAGVESLMIERTMHLP YIISDLSIWQFIVLLYLFYLIISVMISIIGLLVSKISRGNIEAFSIMSVIIVGVSYILNIL >Mature_301_residues MNNVTKMELYKVLSKPQVYIIFVVGLIIQSIMAGQMRTTMFNGYHKSVYENYMNEMEGEYSIEKKEYINSEYQKFQAIID DKQKNEIAFNNGKIDGKDYHSIINEEKKAQYRIATVKYIVEKTEYYDSLDKSAQYFYDIEISDYIENLRFNVIPIIVILL IVVPMYTDDIYAGTLAMIKSSKNGRMILLKSRLNISLLISLLICILFAFVEFVTKYIIFDLGNLNAGVESLMIERTMHLP YIISDLSIWQFIVLLYLFYLIISVMISIIGLLVSKISRGNIEAFSIMSVIIVGVSYILNIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34869; Mature: 34869
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVTKMELYKVLSKPQVYIIFVVGLIIQSIMAGQMRTTMFNGYHKSVYENYMNEMEGEY CCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SIEKKEYINSEYQKFQAIIDDKQKNEIAFNNGKIDGKDYHSIINEEKKAQYRIATVKYIV CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHH EKTEYYDSLDKSAQYFYDIEISDYIENLRFNVIPIIVILLIVVPMYTDDIYAGTLAMIKS HHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC SKNGRMILLKSRLNISLLISLLICILFAFVEFVTKYIIFDLGNLNAGVESLMIERTMHLP CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC YIISDLSIWQFIVLLYLFYLIISVMISIIGLLVSKISRGNIEAFSIMSVIIVGVSYILNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC L C >Mature Secondary Structure MNNVTKMELYKVLSKPQVYIIFVVGLIIQSIMAGQMRTTMFNGYHKSVYENYMNEMEGEY CCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SIEKKEYINSEYQKFQAIIDDKQKNEIAFNNGKIDGKDYHSIINEEKKAQYRIATVKYIV CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHH EKTEYYDSLDKSAQYFYDIEISDYIENLRFNVIPIIVILLIVVPMYTDDIYAGTLAMIKS HHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC SKNGRMILLKSRLNISLLISLLICILFAFVEFVTKYIIFDLGNLNAGVESLMIERTMHLP CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC YIISDLSIWQFIVLLYLFYLIISVMISIIGLLVSKISRGNIEAFSIMSVIIVGVSYILNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA