| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922564
Identifier: 238922564
GI number: 238922564
Start: 128935
End: 131100
Strand: Direct
Name: 238922564
Synonym: EUBREC_0138
Alternate gene names: NA
Gene position: 128935-131100 (Clockwise)
Preceding gene: 238922563
Following gene: 238922565
Centisome position: 3.74
GC content: 43.03
Gene sequence:
>2166_bases ATGAGTGAGAAAAATACAGGACGTGTCACAATTCCTACAAATCTGGATGTGGTTCCAGAGACAATTGAGTTAATGAAACG CTGGGGTGCAGATGCAATCCGCGATTGTGACGGAACAGAATTCCCGGAAGAGCTGACAAAGACCGGGGCAAAGATTTATG CAACTTACTACACCACGAGAAAAGATAATGAGTGGGCGAAGGCGAACCCGGATGAGGTGCAGCAGTGTTATATTATGAGT GGATTTTATACGGCTGTTGAAAGCGAACTGCAAATTCCTCTGATGAAGGGGATTTCGGATGAGTTAATGCAGGTCAATAC AAGAGATGATATTAAACGATGGTGGGAGGTTGTTGACCGTTCCACAGGTCAGGTGGTATCGACCAAACAGTGGGAATATA ATGAGGAGTCAGGGTGCGTCTGTATTCATGAGGCAGAACCGTTTCATGAATATACAGTAAGCTTTCTGGCATATATTATC TGGGATCCGGTACATATGTACAATGCGGTGACAAATGACTGGAAAGATTTCGAACATCAGATTACGTTTGACGTACGGCA GCCGAAAACACATAAATATTCCATGGAGCGCCTGCGTAAATTCTGCGAGGAGCATCCATATGTCAATGTCATTCGCTATA CGACGTTTTTCCATCAGTTTACATTGATGTTTGACGAGTTAAAGCGGGAAAAATATGTGGATTGGTATGGTTATTCCGCG TCAGTAAGTCCTTATATTTTAGAGCAGTTTGAAAAAGAAATGGGTTATAAATTCCGCCCGGAATATATCATTGACCAGGG ATATTATAACAATCAGTATCGTGTACCTGGTAAAGAATATAAGGATTTTCAGGCATTCCAGCGCAGGGAAGTTGCAAAGC TTGCAAAAGAGATGGTTGACATCACACATGAATGCGGCAAAGAGGCAATGATGTTTTTGGGGGATCACTGGATCGGAACA GAACCATTCATGGAAGAGTTTGCAACGATCGGTCTTGACGCAGTGGTAGGAAGCGTTGGAAACGGAAGTACACTTCGTCT GATCTCTGATATTGAAGGTGTAAAATATACAGAAGGAAGATTCCTTCCATACTTTTTCCCGGATACCTTCCATGAGGGCG GAGATCCTGTCAAGGAAGCAAAGGAAAACTGGGTGACAGCACGCCGTGCCATCTTAAGAAAACCAATCGACCGTATCGGA TATGGCGGATATTTAAAGCTTGCATTAGATTTCCCGGAGTTTTTGGACTATGTGGAGAGCGTGTGCAACGAATTCCGTGA ACTGTATGAGAATGCAAAAGGAACAACACCGTACTGTGTAAAAAAGGTTGCTGTTTTAAACAGCTGGGGCAAAATCCGCA GCTGGGGCTGCCATATGGTACACCATGCCTTATATCAGAAACAGAATTACAGTTATGCGGGAATTATCGAGGCGTTAAGC GGCGCACCGTTTGATGTGAAATTTATTTCCTTTGATGATATTTTAAAGGATAAGGATATATTAAAGGATATTGATGTCAT TATCAATGTCGGGGACGGGGATACGGCACACACCGGCGGGGCAGTCTGGGAGAATGCAGTTATTTCCACAGCCATTCGTG AATTTGTCTACCGGGGCGGTGGATTTATCGGTGTCGGGGAACCGGCAGGACACCAGTATCAGGGACATTATCTGCAGCTT GCCGATTTAATTGGTGTGGAAAAAGAAACCGGATTTACCTTAAACTACGATAAGTATAACTGGGAAGAACACAAAAATCA CTTTATTCTTGCAGATACAACAAAGCCTGTTGACTTCGGAGAGGGCAAGAAGAATATGTTTGCGTATGAGGGAACAGAAA TTCTGGTACAGAGGGACAAAGAAGTTCAGATGGCTGTGCATGAATTTGGCGAGGGCCGCTCGGTTTATATCAGCGGACTG CCTTATAGTTTTGAGAACAGCAGAATTCTTTATCGGAGTATTTTGTGGAGTACACATGGCGAAAGTTTATTACATCAGTG GTTTAGTACAAATTTCAATGTGGAAGTACATGCATATGTAAAAAATGGCAAATTCTGTGTTGTAAATAATACCTACGAGC CACAGAATACGGTTATCTATCGCGGAGATGGAAGCAGTTTTGCGTTGAAAATGGAGGCAAATGAGATTAAATGGTACGCT GTTTAA
Upstream 100 bases:
>100_bases ATTATCTGTTTATTAATAGCATTGTGGATTTATAATTGCCCTTTTGCAGAAAAGAAGAAAAGAAAGTAATTATATGGATG AAATAGAGTGAGGAAGAAAA
Downstream 100 bases:
>100_bases TCAGGAGGTATAAAGAAGATGAAGAAACCTGTACTTGTAATTATGGCAGCCGGAATGGGAAGCCGTTACGGTGGAATGAA ACAGATTGATCCAGTAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MSEKNTGRVTIPTNLDVVPETIELMKRWGADAIRDCDGTEFPEELTKTGAKIYATYYTTRKDNEWAKANPDEVQQCYIMS GFYTAVESELQIPLMKGISDELMQVNTRDDIKRWWEVVDRSTGQVVSTKQWEYNEESGCVCIHEAEPFHEYTVSFLAYII WDPVHMYNAVTNDWKDFEHQITFDVRQPKTHKYSMERLRKFCEEHPYVNVIRYTTFFHQFTLMFDELKREKYVDWYGYSA SVSPYILEQFEKEMGYKFRPEYIIDQGYYNNQYRVPGKEYKDFQAFQRREVAKLAKEMVDITHECGKEAMMFLGDHWIGT EPFMEEFATIGLDAVVGSVGNGSTLRLISDIEGVKYTEGRFLPYFFPDTFHEGGDPVKEAKENWVTARRAILRKPIDRIG YGGYLKLALDFPEFLDYVESVCNEFRELYENAKGTTPYCVKKVAVLNSWGKIRSWGCHMVHHALYQKQNYSYAGIIEALS GAPFDVKFISFDDILKDKDILKDIDVIINVGDGDTAHTGGAVWENAVISTAIREFVYRGGGFIGVGEPAGHQYQGHYLQL ADLIGVEKETGFTLNYDKYNWEEHKNHFILADTTKPVDFGEGKKNMFAYEGTEILVQRDKEVQMAVHEFGEGRSVYISGL PYSFENSRILYRSILWSTHGESLLHQWFSTNFNVEVHAYVKNGKFCVVNNTYEPQNTVIYRGDGSSFALKMEANEIKWYA V
Sequences:
>Translated_721_residues MSEKNTGRVTIPTNLDVVPETIELMKRWGADAIRDCDGTEFPEELTKTGAKIYATYYTTRKDNEWAKANPDEVQQCYIMS GFYTAVESELQIPLMKGISDELMQVNTRDDIKRWWEVVDRSTGQVVSTKQWEYNEESGCVCIHEAEPFHEYTVSFLAYII WDPVHMYNAVTNDWKDFEHQITFDVRQPKTHKYSMERLRKFCEEHPYVNVIRYTTFFHQFTLMFDELKREKYVDWYGYSA SVSPYILEQFEKEMGYKFRPEYIIDQGYYNNQYRVPGKEYKDFQAFQRREVAKLAKEMVDITHECGKEAMMFLGDHWIGT EPFMEEFATIGLDAVVGSVGNGSTLRLISDIEGVKYTEGRFLPYFFPDTFHEGGDPVKEAKENWVTARRAILRKPIDRIG YGGYLKLALDFPEFLDYVESVCNEFRELYENAKGTTPYCVKKVAVLNSWGKIRSWGCHMVHHALYQKQNYSYAGIIEALS GAPFDVKFISFDDILKDKDILKDIDVIINVGDGDTAHTGGAVWENAVISTAIREFVYRGGGFIGVGEPAGHQYQGHYLQL ADLIGVEKETGFTLNYDKYNWEEHKNHFILADTTKPVDFGEGKKNMFAYEGTEILVQRDKEVQMAVHEFGEGRSVYISGL PYSFENSRILYRSILWSTHGESLLHQWFSTNFNVEVHAYVKNGKFCVVNNTYEPQNTVIYRGDGSSFALKMEANEIKWYA V >Mature_720_residues SEKNTGRVTIPTNLDVVPETIELMKRWGADAIRDCDGTEFPEELTKTGAKIYATYYTTRKDNEWAKANPDEVQQCYIMSG FYTAVESELQIPLMKGISDELMQVNTRDDIKRWWEVVDRSTGQVVSTKQWEYNEESGCVCIHEAEPFHEYTVSFLAYIIW DPVHMYNAVTNDWKDFEHQITFDVRQPKTHKYSMERLRKFCEEHPYVNVIRYTTFFHQFTLMFDELKREKYVDWYGYSAS VSPYILEQFEKEMGYKFRPEYIIDQGYYNNQYRVPGKEYKDFQAFQRREVAKLAKEMVDITHECGKEAMMFLGDHWIGTE PFMEEFATIGLDAVVGSVGNGSTLRLISDIEGVKYTEGRFLPYFFPDTFHEGGDPVKEAKENWVTARRAILRKPIDRIGY GGYLKLALDFPEFLDYVESVCNEFRELYENAKGTTPYCVKKVAVLNSWGKIRSWGCHMVHHALYQKQNYSYAGIIEALSG APFDVKFISFDDILKDKDILKDIDVIINVGDGDTAHTGGAVWENAVISTAIREFVYRGGGFIGVGEPAGHQYQGHYLQLA DLIGVEKETGFTLNYDKYNWEEHKNHFILADTTKPVDFGEGKKNMFAYEGTEILVQRDKEVQMAVHEFGEGRSVYISGLP YSFENSRILYRSILWSTHGESLLHQWFSTNFNVEVHAYVKNGKFCVVNNTYEPQNTVIYRGDGSSFALKMEANEIKWYAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83545; Mature: 83414
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKNTGRVTIPTNLDVVPETIELMKRWGADAIRDCDGTEFPEELTKTGAKIYATYYTTR CCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHCCCCEEEEEEEEEC KDNEWAKANPDEVQQCYIMSGFYTAVESELQIPLMKGISDELMQVNTRDDIKRWWEVVDR CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHCC STGQVVSTKQWEYNEESGCVCIHEAEPFHEYTVSFLAYIIWDPVHMYNAVTNDWKDFEHQ CCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEE ITFDVRQPKTHKYSMERLRKFCEEHPYVNVIRYTTFFHQFTLMFDELKREKYVDWYGYSA EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCC SVSPYILEQFEKEMGYKFRPEYIIDQGYYNNQYRVPGKEYKDFQAFQRREVAKLAKEMVD CCCHHHHHHHHHHCCCEECCCEEEECCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHH ITHECGKEAMMFLGDHWIGTEPFMEEFATIGLDAVVGSVGNGSTLRLISDIEGVKYTEGR HHHHHCHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCCEECCCC FLPYFFPDTFHEGGDPVKEAKENWVTARRAILRKPIDRIGYGGYLKLALDFPEFLDYVES EEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHHHH VCNEFRELYENAKGTTPYCVKKVAVLNSWGKIRSWGCHMVHHALYQKQNYSYAGIIEALS HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GAPFDVKFISFDDILKDKDILKDIDVIINVGDGDTAHTGGAVWENAVISTAIREFVYRGG CCCCEEEEEEHHHHHCHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GFIGVGEPAGHQYQGHYLQLADLIGVEKETGFTLNYDKYNWEEHKNHFILADTTKPVDFG CEEECCCCCCCCCCCCCEEEHHHHCCCCCCCEEEECCCCCHHHHCCEEEEEECCCCCCCC EGKKNMFAYEGTEILVQRDKEVQMAVHEFGEGRSVYISGLPYSFENSRILYRSILWSTHG CCCCCEEEECCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEHHHHHHCCC ESLLHQWFSTNFNVEVHAYVKNGKFCVVNNTYEPQNTVIYRGDGSSFALKMEANEIKWYA HHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEECCCCEEEEEEECCCEEEEE V C >Mature Secondary Structure SEKNTGRVTIPTNLDVVPETIELMKRWGADAIRDCDGTEFPEELTKTGAKIYATYYTTR CCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHCCCCEEEEEEEEEC KDNEWAKANPDEVQQCYIMSGFYTAVESELQIPLMKGISDELMQVNTRDDIKRWWEVVDR CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHCC STGQVVSTKQWEYNEESGCVCIHEAEPFHEYTVSFLAYIIWDPVHMYNAVTNDWKDFEHQ CCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEE ITFDVRQPKTHKYSMERLRKFCEEHPYVNVIRYTTFFHQFTLMFDELKREKYVDWYGYSA EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCC SVSPYILEQFEKEMGYKFRPEYIIDQGYYNNQYRVPGKEYKDFQAFQRREVAKLAKEMVD CCCHHHHHHHHHHCCCEECCCEEEECCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHH ITHECGKEAMMFLGDHWIGTEPFMEEFATIGLDAVVGSVGNGSTLRLISDIEGVKYTEGR HHHHHCHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCCEECCCC FLPYFFPDTFHEGGDPVKEAKENWVTARRAILRKPIDRIGYGGYLKLALDFPEFLDYVES EEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHHHH VCNEFRELYENAKGTTPYCVKKVAVLNSWGKIRSWGCHMVHHALYQKQNYSYAGIIEALS HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GAPFDVKFISFDDILKDKDILKDIDVIINVGDGDTAHTGGAVWENAVISTAIREFVYRGG CCCCEEEEEEHHHHHCHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GFIGVGEPAGHQYQGHYLQLADLIGVEKETGFTLNYDKYNWEEHKNHFILADTTKPVDFG CEEECCCCCCCCCCCCCEEEHHHHCCCCCCCEEEECCCCCHHHHCCEEEEEECCCCCCCC EGKKNMFAYEGTEILVQRDKEVQMAVHEFGEGRSVYISGLPYSFENSRILYRSILWSTHG CCCCCEEEECCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEHHHHHHCCC ESLLHQWFSTNFNVEVHAYVKNGKFCVVNNTYEPQNTVIYRGDGSSFALKMEANEIKWYA HHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEECCCCEEEEEEECCCEEEEE V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA