Click here to switch to the map view.

The map label for this gene is atpF [H]

Identifier: 238922546

GI number: 238922546

Start: 115294

End: 115824

Strand: Direct

Name: atpF [H]

Synonym: EUBREC_0120

Alternate gene names: 238922546

Gene position: 115294-115824 (Clockwise)

Preceding gene: 238922545

Following gene: 238922547

Centisome position: 3.34

GC content: 44.07

Gene sequence:

>531_bases
TTGTTAGCACAGGGATATACATTTTTGTTTAATCTGGATGCGCAGTTGCTCTTTGATACAGTACTTTTGGCAGTTGCAGT
ATTTTTCCTTTTCATGCTGATGTCGTATCTGCTTTTCAACCCTGCAAGGAAGATGTTAAAGGACAGGCAGGACAGGATAG
AAAGCGATATAAACACAGCTATTGCTGACAAGGAAAGTGCCGCAGCACTAAAGGCAGAGTACGAGGGAAAGCTTAAGGAT
ATTGATAAAGAGGCCGAGGCTATTCTCACAGATGCGAGACAGAAGGCGCTTAAAAACCAGAACAAGATTGTGGATGATGC
AAAGGAAGAGGCTTCTCGCATCATAAAGAGAGCCAGAGAAGAGGCAGAGCTTGAGAAGAAGCATGCCATGGATGATATGA
AGCAGGAGATGATACAGATAGCATCGCTTATGGCACAAAAGGCTGTCGCAGCTTCGATCACCACAGACATTCAGGATACA
CTCGTTGAAGAGACACTTAAGGAAATGGGAGAATCAACATGGCTAAGCTAG

Upstream 100 bases:

>100_bases
CATTACTTTTACTTTTCGTTCATCCGCTCGGATAGTATATTACGGTTTGCCGCAGAGGATTACCGTGCGGCGATACAGCC
AACGGAAAGGAGAGTAAAAG

Downstream 100 bases:

>100_bases
TATCTAAGGTATACGGTGATGCATTGTTTGAGGCTGCCCTTGAGGATAACAGGCTATCAAGCCTGTCTGACGAGGTAACA
GCAGTAAAGGAAATCATTGC

Product: hypothetical protein

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLAQGYTFLFNLDAQLLFDTVLLAVAVFFLFMLMSYLLFNPARKMLKDRQDRIESDINTAIADKESAAALKAEYEGKLKD
IDKEAEAILTDARQKALKNQNKIVDDAKEEASRIIKRAREEAELEKKHAMDDMKQEMIQIASLMAQKAVAASITTDIQDT
LVEETLKEMGESTWLS

Sequences:

>Translated_176_residues
MLAQGYTFLFNLDAQLLFDTVLLAVAVFFLFMLMSYLLFNPARKMLKDRQDRIESDINTAIADKESAAALKAEYEGKLKD
IDKEAEAILTDARQKALKNQNKIVDDAKEEASRIIKRAREEAELEKKHAMDDMKQEMIQIASLMAQKAVAASITTDIQDT
LVEETLKEMGESTWLS
>Mature_176_residues
MLAQGYTFLFNLDAQLLFDTVLLAVAVFFLFMLMSYLLFNPARKMLKDRQDRIESDINTAIADKESAAALKAEYEGKLKD
IDKEAEAILTDARQKALKNQNKIVDDAKEEASRIIKRAREEAELEKKHAMDDMKQEMIQIASLMAQKAVAASITTDIQDT
LVEETLKEMGESTWLS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19940; Mature: 19940

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQGYTFLFNLDAQLLFDTVLLAVAVFFLFMLMSYLLFNPARKMLKDRQDRIESDINTA
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADKESAAALKAEYEGKLKDIDKEAEAILTDARQKALKNQNKIVDDAKEEASRIIKRARE
HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAELEKKHAMDDMKQEMIQIASLMAQKAVAASITTDIQDTLVEETLKEMGESTWLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLAQGYTFLFNLDAQLLFDTVLLAVAVFFLFMLMSYLLFNPARKMLKDRQDRIESDINTA
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADKESAAALKAEYEGKLKDIDKEAEAILTDARQKALKNQNKIVDDAKEEASRIIKRARE
HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAELEKKHAMDDMKQEMIQIASLMAQKAVAASITTDIQDTLVEETLKEMGESTWLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA