| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922478
Identifier: 238922478
GI number: 238922478
Start: 57171
End: 58160
Strand: Direct
Name: 238922478
Synonym: EUBREC_0052
Alternate gene names: NA
Gene position: 57171-58160 (Clockwise)
Preceding gene: 238922477
Following gene: 238922479
Centisome position: 1.66
GC content: 42.63
Gene sequence:
>990_bases ATGAAGATAAATATTTATTATGGTGGAAGAGGTTTACTGGACGACCCGACACTGTATGTGATAAGCAGGATAGAAAATGT GCTAAAGGAGCTCCGCGTAAAGGTGGAGAGATACAATATCTATGAGCACAAAAATGAAATAGCTACATTGCCACAGACCT TTAAGGATGTAGATGGAATCATTCTCGCAACGACGGTTGAGTGGCTTGGTATAGGTGGATACATGCAGCAGTTCCTTGAT GCATGCTGGCTCTACGGCGATAAGGAAAAGATAAGCAATACATATATGCAGCCTATTGTTATGTCTACCACATATGGAGA GCGCGAGGCAGAAACCACACTATGCAATGCATGGGAGATACTTGGCGGTCTGCCGTGCTCAGGGTTATGCGGATATGTAG AGGATATTACTACATTTCAGCTCAATAAGGAGTATAATCTCATAATAGAAAAACGCGCGGAGAATCTGTATCGCACGATA TCCCAGAAGATTAAGAGCCTGCCTACAAGCAATCAGGCAGTGAAGCAAAGTGTACTCAGGACACAGCAGCTCAATCTCAC CCCACAGGAGAGCGAGCAGCTGTCGAAGTATGTGTCTGATGATACATATGTAAAGCAGCAGAAGGAGGATATCGAGGAGC TTGCAACCATGTTCAAGGACATGCTCGGGCAGCAGGCGTCTACAGATGACATGCCATATATAAAGGAGCTTGAAGCACAT TTTATTCCACTTCGTGAATTCAAAGCCTGCTATTCATTTAATATAGAGGGCATTAAAAATCCATTATATATAAAGGTGGA TGAGGATAAGCTGGATATACACTATGGCGAAGAGGATATAGTGGATGTATACGCCAAATTTTCGAAGAGTATCATGGAGT CTATAATAGATGGTCACATGACCTTCCAGAGAGCATTTATGACCGGAGAAATGACAGCAAAAGGCAATTTCAAGACACTG CGCATGCTTGATCAGATATTTCCGTTTTAA
Upstream 100 bases:
>100_bases GCGGGCTCGTAGGCGGATTTGTTATTTCAATTGTTTTATATCGCAAAAAGAGATATAATAAATATAATATCAACTAAAAA TTAATGGTAGGAGAAGCTAC
Downstream 100 bases:
>100_bases TGGGCTTTTTGATTCTTAACAGTTACAAAATAATTATATATATGAGGTGACAAAGATGAAAGATGACAACTGTATTTTCT GTAAACTGGCAAATGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKINIYYGGRGLLDDPTLYVISRIENVLKELRVKVERYNIYEHKNEIATLPQTFKDVDGIILATTVEWLGIGGYMQQFLD ACWLYGDKEKISNTYMQPIVMSTTYGEREAETTLCNAWEILGGLPCSGLCGYVEDITTFQLNKEYNLIIEKRAENLYRTI SQKIKSLPTSNQAVKQSVLRTQQLNLTPQESEQLSKYVSDDTYVKQQKEDIEELATMFKDMLGQQASTDDMPYIKELEAH FIPLREFKACYSFNIEGIKNPLYIKVDEDKLDIHYGEEDIVDVYAKFSKSIMESIIDGHMTFQRAFMTGEMTAKGNFKTL RMLDQIFPF
Sequences:
>Translated_329_residues MKINIYYGGRGLLDDPTLYVISRIENVLKELRVKVERYNIYEHKNEIATLPQTFKDVDGIILATTVEWLGIGGYMQQFLD ACWLYGDKEKISNTYMQPIVMSTTYGEREAETTLCNAWEILGGLPCSGLCGYVEDITTFQLNKEYNLIIEKRAENLYRTI SQKIKSLPTSNQAVKQSVLRTQQLNLTPQESEQLSKYVSDDTYVKQQKEDIEELATMFKDMLGQQASTDDMPYIKELEAH FIPLREFKACYSFNIEGIKNPLYIKVDEDKLDIHYGEEDIVDVYAKFSKSIMESIIDGHMTFQRAFMTGEMTAKGNFKTL RMLDQIFPF >Mature_329_residues MKINIYYGGRGLLDDPTLYVISRIENVLKELRVKVERYNIYEHKNEIATLPQTFKDVDGIILATTVEWLGIGGYMQQFLD ACWLYGDKEKISNTYMQPIVMSTTYGEREAETTLCNAWEILGGLPCSGLCGYVEDITTFQLNKEYNLIIEKRAENLYRTI SQKIKSLPTSNQAVKQSVLRTQQLNLTPQESEQLSKYVSDDTYVKQQKEDIEELATMFKDMLGQQASTDDMPYIKELEAH FIPLREFKACYSFNIEGIKNPLYIKVDEDKLDIHYGEEDIVDVYAKFSKSIMESIIDGHMTFQRAFMTGEMTAKGNFKTL RMLDQIFPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38034; Mature: 38034
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINIYYGGRGLLDDPTLYVISRIENVLKELRVKVERYNIYEHKNEIATLPQTFKDVDGI CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE ILATTVEWLGIGGYMQQFLDACWLYGDKEKISNTYMQPIVMSTTYGEREAETTLCNAWEI EEEEHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHH LGGLPCSGLCGYVEDITTFQLNKEYNLIIEKRAENLYRTISQKIKSLPTSNQAVKQSVLR HCCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TQQLNLTPQESEQLSKYVSDDTYVKQQKEDIEELATMFKDMLGQQASTDDMPYIKELEAH HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH FIPLREFKACYSFNIEGIKNPLYIKVDEDKLDIHYGEEDIVDVYAKFSKSIMESIIDGHM CCCHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH TFQRAFMTGEMTAKGNFKTLRMLDQIFPF HHHHHHHCCCEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MKINIYYGGRGLLDDPTLYVISRIENVLKELRVKVERYNIYEHKNEIATLPQTFKDVDGI CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE ILATTVEWLGIGGYMQQFLDACWLYGDKEKISNTYMQPIVMSTTYGEREAETTLCNAWEI EEEEHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHH LGGLPCSGLCGYVEDITTFQLNKEYNLIIEKRAENLYRTISQKIKSLPTSNQAVKQSVLR HCCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TQQLNLTPQESEQLSKYVSDDTYVKQQKEDIEELATMFKDMLGQQASTDDMPYIKELEAH HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH FIPLREFKACYSFNIEGIKNPLYIKVDEDKLDIHYGEEDIVDVYAKFSKSIMESIIDGHM CCCHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH TFQRAFMTGEMTAKGNFKTLRMLDQIFPF HHHHHHHCCCEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA