| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922476
Identifier: 238922476
GI number: 238922476
Start: 55263
End: 56456
Strand: Direct
Name: 238922476
Synonym: EUBREC_0050
Alternate gene names: NA
Gene position: 55263-56456 (Clockwise)
Preceding gene: 238922475
Following gene: 238922477
Centisome position: 1.6
GC content: 42.04
Gene sequence:
>1194_bases ATGAATTCTAATGAAATAGTATATGAAAGAAAGATGACAGGCAGCTTTATGAAGCTGCGTTGTGACGAGGTGAGGCCGTT AGATGAAAAGATATTGCTGAAAAACAATATTCCGGGCTTTCTGCCTATGGAGAAGTGTTATGTGAATAATGAAGGGCAGT ACTGGTATGATATATCCGGAGTCCAGTCTTTGGAAATGCGCTGCCAGTACAATGACATAAAGCTTGAGTTTCTTGAAAAG CTTGTGGTGAGTATCTGTAACAAGATGGAGCTTTTGGAGAATCATCTTGTTAGCACAGAATCTCTGGTGCTTGATCCTCA GCTAATACACATAAAAGGGGTAAATCAGGATGAGGAAATATATTTTACAGCATACCCGGCACAGATGAAAACCATTTGCA ATACATTCTCGCATTTAATGGAGTATATGCTAACGAAACTTGACCACAGTGATGCTGAAGCGATACATATAGCATATGGC ATATATGAGAAAACCATAAATGGCAATTACAGTATTGCTGATATTCGAAATGCCATAATCGAGGAGCGACAGAAAAAGGT GGCAGAAAAGCCGGTGGAGGAGGTGATTGCGCCAATTTCACAGCCACAGGTCAGAGTAGAGGAGCCTAAGGAGCAGATAA AGCCTACACTGTACGATAAGCTTCGGGTGTATCTGCTGGAGCAGCTGGATATCAGGCTGCCGGAGCGAAAGAAGCAGGCG TCAGTGATAGAAAAGCCTAAAAAACCGGACATAAACAGAAAATGGTTTAAAAAAGAGAAACGAAAAGAAAATCGTGAAAA GTTAGATGACACCATGCTTATACACCCAAGCTCAGAGGCTGCACCGGAGCCTGTACCGCGTCAGATACACCCCACAGTAT GTCTGAGCGATTACAGGGAGCACCCACAGGGCATGCTTTTGTATGAGGGCATGGAAAACCGCAGTAATATAATAATAGAC AAAGATTGTACGCGTATTGGTCAGGGCGATGAGGCCGATGCAGTAATAGGCAAGGATACAATAAGTCATTTTCATGCAGT TATAAATAGGGAAAACCAGGAATTTTATCTGGAGGATTTAAACTCCACAAATGGAACCTTTGTGAATAATGAGGTGCTTG CGTACAAGCAGAAGAAGCAGCTCAAGTCAAATGATATCATCAGATTTGCCGATGTTAAGTACCGGTTTGTATAA
Upstream 100 bases:
>100_bases CTGTATAACGAAATGAAAGCAGACAGCTCTTATGAGTATGCTACTGACATGTGGCTGGTGGATGATTTCTATAATTATCA GGTTTTGAAAGAGGTAGTAA
Downstream 100 bases:
>100_bases TTGTTGCAAATAAGCTCCTTAAAATTTATAATAAGAAAAAAGTATTTAACAGGAAAATTAAGGAGACCCCACAGATTTGC AGAATATAAAAAGATTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNSNEIVYERKMTGSFMKLRCDEVRPLDEKILLKNNIPGFLPMEKCYVNNEGQYWYDISGVQSLEMRCQYNDIKLEFLEK LVVSICNKMELLENHLVSTESLVLDPQLIHIKGVNQDEEIYFTAYPAQMKTICNTFSHLMEYMLTKLDHSDAEAIHIAYG IYEKTINGNYSIADIRNAIIEERQKKVAEKPVEEVIAPISQPQVRVEEPKEQIKPTLYDKLRVYLLEQLDIRLPERKKQA SVIEKPKKPDINRKWFKKEKRKENREKLDDTMLIHPSSEAAPEPVPRQIHPTVCLSDYREHPQGMLLYEGMENRSNIIID KDCTRIGQGDEADAVIGKDTISHFHAVINRENQEFYLEDLNSTNGTFVNNEVLAYKQKKQLKSNDIIRFADVKYRFV
Sequences:
>Translated_397_residues MNSNEIVYERKMTGSFMKLRCDEVRPLDEKILLKNNIPGFLPMEKCYVNNEGQYWYDISGVQSLEMRCQYNDIKLEFLEK LVVSICNKMELLENHLVSTESLVLDPQLIHIKGVNQDEEIYFTAYPAQMKTICNTFSHLMEYMLTKLDHSDAEAIHIAYG IYEKTINGNYSIADIRNAIIEERQKKVAEKPVEEVIAPISQPQVRVEEPKEQIKPTLYDKLRVYLLEQLDIRLPERKKQA SVIEKPKKPDINRKWFKKEKRKENREKLDDTMLIHPSSEAAPEPVPRQIHPTVCLSDYREHPQGMLLYEGMENRSNIIID KDCTRIGQGDEADAVIGKDTISHFHAVINRENQEFYLEDLNSTNGTFVNNEVLAYKQKKQLKSNDIIRFADVKYRFV >Mature_397_residues MNSNEIVYERKMTGSFMKLRCDEVRPLDEKILLKNNIPGFLPMEKCYVNNEGQYWYDISGVQSLEMRCQYNDIKLEFLEK LVVSICNKMELLENHLVSTESLVLDPQLIHIKGVNQDEEIYFTAYPAQMKTICNTFSHLMEYMLTKLDHSDAEAIHIAYG IYEKTINGNYSIADIRNAIIEERQKKVAEKPVEEVIAPISQPQVRVEEPKEQIKPTLYDKLRVYLLEQLDIRLPERKKQA SVIEKPKKPDINRKWFKKEKRKENREKLDDTMLIHPSSEAAPEPVPRQIHPTVCLSDYREHPQGMLLYEGMENRSNIIID KDCTRIGQGDEADAVIGKDTISHFHAVINRENQEFYLEDLNSTNGTFVNNEVLAYKQKKQLKSNDIIRFADVKYRFV
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46392; Mature: 46392
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNEIVYERKMTGSFMKLRCDEVRPLDEKILLKNNIPGFLPMEKCYVNNEGQYWYDISG CCCCCEEEEECCCCCHHEEECCCCCCCCHHEEEECCCCCCCCHHHEEECCCCCEEEECCC VQSLEMRCQYNDIKLEFLEKLVVSICNKMELLENHLVSTESLVLDPQLIHIKGVNQDEEI CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCEEEEEECCCCCCCE YFTAYPAQMKTICNTFSHLMEYMLTKLDHSDAEAIHIAYGIYEKTINGNYSIADIRNAII EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHEEHHCCCCEEHHHHHHHHH EERQKKVAEKPVEEVIAPISQPQVRVEEPKEQIKPTLYDKLRVYLLEQLDIRLPERKKQA HHHHHHHHHCCHHHHHCCCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH SVIEKPKKPDINRKWFKKEKRKENREKLDDTMLIHPSSEAAPEPVPRQIHPTVCLSDYRE HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHC HPQGMLLYEGMENRSNIIIDKDCTRIGQGDEADAVIGKDTISHFHAVINRENQEFYLEDL CCCCEEEEECCCCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHEEC NSTNGTFVNNEVLAYKQKKQLKSNDIIRFADVKYRFV CCCCCEEECCHHHHHHHHHHCCCCCCEEEECEEEEEC >Mature Secondary Structure MNSNEIVYERKMTGSFMKLRCDEVRPLDEKILLKNNIPGFLPMEKCYVNNEGQYWYDISG CCCCCEEEEECCCCCHHEEECCCCCCCCHHEEEECCCCCCCCHHHEEECCCCCEEEECCC VQSLEMRCQYNDIKLEFLEKLVVSICNKMELLENHLVSTESLVLDPQLIHIKGVNQDEEI CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCEEEEEECCCCCCCE YFTAYPAQMKTICNTFSHLMEYMLTKLDHSDAEAIHIAYGIYEKTINGNYSIADIRNAII EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHEEHHCCCCEEHHHHHHHHH EERQKKVAEKPVEEVIAPISQPQVRVEEPKEQIKPTLYDKLRVYLLEQLDIRLPERKKQA HHHHHHHHHCCHHHHHCCCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH SVIEKPKKPDINRKWFKKEKRKENREKLDDTMLIHPSSEAAPEPVPRQIHPTVCLSDYRE HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHC HPQGMLLYEGMENRSNIIIDKDCTRIGQGDEADAVIGKDTISHFHAVINRENQEFYLEDL CCCCEEEEECCCCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHEEC NSTNGTFVNNEVLAYKQKKQLKSNDIIRFADVKYRFV CCCCCEEECCHHHHHHHHHHCCCCCCEEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA