| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922470
Identifier: 238922470
GI number: 238922470
Start: 50788
End: 52014
Strand: Direct
Name: 238922470
Synonym: EUBREC_0044
Alternate gene names: NA
Gene position: 50788-52014 (Clockwise)
Preceding gene: 238922469
Following gene: 238922471
Centisome position: 1.47
GC content: 43.19
Gene sequence:
>1227_bases ATGACGGGAGGAAAGAGGCTTAGAATAGCAGCATTATTTGTTATAGTTTTAGTTTTTGCTTTTATCATGGACATGTCGTC AAATGCTATAACTGATAATACACTTATACGCAATGATACAGGTGACGGAGATGCAGTATATGATCTGGTGCTAAATGCGG ATGGACTCGATGAGGATTACAGCTATCAGCTGAAGGTTATGGAGGAGCAGCCTTCGGATAAACAGGCGAATGAGCTGTTT ACACAGGCAAAAAAAGAGATAGACGACAGCTTTTGTGAAGAGAATCAGAGTGTGGAACAGGTCAGAGGGCATGTGATTAT GAAGGATGCATATGCATCGGGAGCTGTGGAGGCAGAGTGGACACTGAGTGACTATGATGTGGTTGATATTAATGGAGATG TGAACCAGGATGCATTTGAGGAGGCTGATGATGAACAGGGAAAGCTGATTAGCGCAAGTGTTGAGCTTTCCTGTGGCGAA CACAGACAGCTGTATGATTTCTCATTTGTGGTATTTCCGGATGAACTGGAAGCGGGTGAGCGCCTCATAAAGGATATCAA CAGACATATTGACAGTGAAATGTCAAAGACTGGGACTAAAAAGCTTACACTGCCGGATGAGGTAGATGGAGTAAAGCTCA GCTGGTCGCAGGAAAAAAGCAATACTGCAGCTAAAATAGCCATGCTTGAAGTTGTTGTTATAGTTCTTCTGGTGCTTGAG AAAAAGGAAAAAAAGAAGACGGCGCAGAAGGAGAGAAATATACAACTGCAGCTCGAATATCCGGAGATAGTCAGCAAAAT GGCTGTTTTGATGGGTTCAGGAATGACTGTGGAGCAGGCATGGAATAGGATTACCGCCCGTTATCTTGATGAGCGGAAAA ATAATGATAAGAATATTATGCCCGCTTACGAGGAAATGCTTGTGACGGAGAGAGAAATCTCAGATGGCGTGACAGGCAGA AAAGCATACGCAGGTTTTGCGGAAAGAGTAAAGCTGCCATGCTATCAGAAGCTTGTACGCATTATTTTACAGAGTATTCA CAAAGGAAGTAAGGGTGTATGTGAAATGCTCGAGAAGGAATCGGAGGATGCATTTGATGAGAGGAGGCTTTTAGCCTTAA AGCTGGGTGAAGAGGCCGGCACCAAAATGCTTATGCCGATGATGATTATGATGGCTATAGTCATAGCAATAGTAATAGCA CCCGCAATCATTGATTTTAAGATATAG
Upstream 100 bases:
>100_bases ATGGAAACCTGATCGGGGTAATCTTTATGAGTACCTGTCTTTTAGCCTATGCAGGGGCAATTAAACTGGCAAAGAAATTT TTACAGGTAGGAATAGGCAT
Downstream 100 bases:
>100_bases AAAGGAAAAATTATGTTAGGATTTAAGAATTTTTTATTAGATGAGGATGGCGCAGGAGTAGTGGAAATGATACTGATAAT TGTCGTGTTAATCGGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTGGKRLRIAALFVIVLVFAFIMDMSSNAITDNTLIRNDTGDGDAVYDLVLNADGLDEDYSYQLKVMEEQPSDKQANELF TQAKKEIDDSFCEENQSVEQVRGHVIMKDAYASGAVEAEWTLSDYDVVDINGDVNQDAFEEADDEQGKLISASVELSCGE HRQLYDFSFVVFPDELEAGERLIKDINRHIDSEMSKTGTKKLTLPDEVDGVKLSWSQEKSNTAAKIAMLEVVVIVLLVLE KKEKKKTAQKERNIQLQLEYPEIVSKMAVLMGSGMTVEQAWNRITARYLDERKNNDKNIMPAYEEMLVTEREISDGVTGR KAYAGFAERVKLPCYQKLVRIILQSIHKGSKGVCEMLEKESEDAFDERRLLALKLGEEAGTKMLMPMMIMMAIVIAIVIA PAIIDFKI
Sequences:
>Translated_408_residues MTGGKRLRIAALFVIVLVFAFIMDMSSNAITDNTLIRNDTGDGDAVYDLVLNADGLDEDYSYQLKVMEEQPSDKQANELF TQAKKEIDDSFCEENQSVEQVRGHVIMKDAYASGAVEAEWTLSDYDVVDINGDVNQDAFEEADDEQGKLISASVELSCGE HRQLYDFSFVVFPDELEAGERLIKDINRHIDSEMSKTGTKKLTLPDEVDGVKLSWSQEKSNTAAKIAMLEVVVIVLLVLE KKEKKKTAQKERNIQLQLEYPEIVSKMAVLMGSGMTVEQAWNRITARYLDERKNNDKNIMPAYEEMLVTEREISDGVTGR KAYAGFAERVKLPCYQKLVRIILQSIHKGSKGVCEMLEKESEDAFDERRLLALKLGEEAGTKMLMPMMIMMAIVIAIVIA PAIIDFKI >Mature_407_residues TGGKRLRIAALFVIVLVFAFIMDMSSNAITDNTLIRNDTGDGDAVYDLVLNADGLDEDYSYQLKVMEEQPSDKQANELFT QAKKEIDDSFCEENQSVEQVRGHVIMKDAYASGAVEAEWTLSDYDVVDINGDVNQDAFEEADDEQGKLISASVELSCGEH RQLYDFSFVVFPDELEAGERLIKDINRHIDSEMSKTGTKKLTLPDEVDGVKLSWSQEKSNTAAKIAMLEVVVIVLLVLEK KEKKKTAQKERNIQLQLEYPEIVSKMAVLMGSGMTVEQAWNRITARYLDERKNNDKNIMPAYEEMLVTEREISDGVTGRK AYAGFAERVKLPCYQKLVRIILQSIHKGSKGVCEMLEKESEDAFDERRLLALKLGEEAGTKMLMPMMIMMAIVIAIVIAP AIIDFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45896; Mature: 45765
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGKRLRIAALFVIVLVFAFIMDMSSNAITDNTLIRNDTGDGDAVYDLVLNADGLDEDY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEEECCCCCCCCC SYQLKVMEEQPSDKQANELFTQAKKEIDDSFCEENQSVEQVRGHVIMKDAYASGAVEAEW CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEHHCCCCCEEEE TLSDYDVVDINGDVNQDAFEEADDEQGKLISASVELSCGEHRQLYDFSFVVFPDELEAGE EECCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCHHHHHH RLIKDINRHIDSEMSKTGTKKLTLPDEVDGVKLSWSQEKSNTAAKIAMLEVVVIVLLVLE HHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH KKEKKKTAQKERNIQLQLEYPEIVSKMAVLMGSGMTVEQAWNRITARYLDERKNNDKNIM HHHHHHHHHHHCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC PAYEEMLVTEREISDGVTGRKAYAGFAERVKLPCYQKLVRIILQSIHKGSKGVCEMLEKE CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC SEDAFDERRLLALKLGEEAGTKMLMPMMIMMAIVIAIVIAPAIIDFKI CHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGGKRLRIAALFVIVLVFAFIMDMSSNAITDNTLIRNDTGDGDAVYDLVLNADGLDEDY CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEEECCCCCCCCC SYQLKVMEEQPSDKQANELFTQAKKEIDDSFCEENQSVEQVRGHVIMKDAYASGAVEAEW CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEHHCCCCCEEEE TLSDYDVVDINGDVNQDAFEEADDEQGKLISASVELSCGEHRQLYDFSFVVFPDELEAGE EECCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCHHHHHH RLIKDINRHIDSEMSKTGTKKLTLPDEVDGVKLSWSQEKSNTAAKIAMLEVVVIVLLVLE HHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH KKEKKKTAQKERNIQLQLEYPEIVSKMAVLMGSGMTVEQAWNRITARYLDERKNNDKNIM HHHHHHHHHHHCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC PAYEEMLVTEREISDGVTGRKAYAGFAERVKLPCYQKLVRIILQSIHKGSKGVCEMLEKE CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC SEDAFDERRLLALKLGEEAGTKMLMPMMIMMAIVIAIVIAPAIIDFKI CHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA