| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is 238922429
Identifier: 238922429
GI number: 238922429
Start: 623476
End: 625248
Strand: Reverse
Name: 238922429
Synonym: EUBELI_20665
Alternate gene names: NA
Gene position: 625248-623476 (Counterclockwise)
Preceding gene: 238922430
Following gene: 238922428
Centisome position: 99.76
GC content: 38.13
Gene sequence:
>1773_bases ATGACCTTTTTTGATATTTCCCGAAAGATGCTGAAAGCTGGTTTTTACAAATATCGATTGTACTTTCTATGCAATTTATC TGCAACGGCATTATTCTGTTGTTTTGCAGTTATTTCCACAAACAGGACGTTTATGAATGCGTCGATTGTAAATTCATCAA TATCCAATAACATTTATCTTCCATTTTTTCTGTCTGCAGTGTTTCTGTTTTTTTTTCTTCCTGTTTCGTGTCAGGCATTT CTGGCATCAAGAAAACAGGAATACGGCGTGATGTTTTCTCTTGGCATGAGCCGGAAGGAAGCGTTTAGAAACTTACTTTT TGAAAATGTGATCATATCCGTGCTGGCATTAGCAATAGCACTTGCGGCAGGAACTGTGCTGTCATTTTTATTTTTTTCCG TTATCATTTATGCAATAGATGTTCACGGAGTGCAATGGCAGTTTTGCCCGGAAGCATATAAGCTTACAGCAGTTCTATAT ACAGTAGTGGTGGCAGTTGCCTTTATCCTGAATGCCGGGAGACTTATGCTGGATAAAATTGGAACCCTGCTAAAAGCACA ATATCGGGCAGAAAAAACAGGAAAGATCGGTACGTTCTTATGCAGACTTGCACCCAACTACATGAGGTTTCATCTGGTGG AATGGTCATTTGTCCGCAGACACAAGAAAGAATGGGGATGTAGGTATGTTTTAGCATCTCTCATAATAGCGGTATCTGTT ATGCTTACGGGGGTATGTGTGACTTTATATCCGGCTTTTCTACAGGATGCAAAAAGTTATTCTCCCTATGACATGGTGTA CTCAAAAATCTATGGAATGAATCAGGTTTCAGTACAGGATGTCCTTCATATATTGGAGAAAAATGGTGTTACTGTAGAAC AGGTCATTCAGCTTCCCTATATCAGAGATGATGTTTTTAATTATCTTCCTGTGACAGAAATAAACCGGGATTTTGGATGT GATTATCAGATTCAGGAAGGCGAGTTTTTGAATTTGTTTCAGTACAATCTGGAAGATGGGTATGAACATAACATACAGCC AGTATCTACTGTAACGATTTCCGGGGACAGAAAGCTGCAGTCTGTTGGAACAGATGTAAAGATACTGTTTAATCAAAATC CGACCTTTGCAGATAAAACACTGATCATAAACGATTCTGATTTCGAAAAATTAAGTGCAGATATAACAGGTAGTGCTGGT ATCGCAAACTTGTTTCAGTTTCAGAATTGGGAAGATTCTTATGCGGGAGTATGTGAAGTAAAAGAATATCTGCAGGAAAG CAATCAGTTGAATGAAGATGAGCAGACATATTATGAATTGTCTTCGAAAGTGGAGAAATACCAGGATGCAAAGAAATCAG GGCAATTTTTATTATTTTTGATGGCATTTGTGATAGGGCTTATGATAATGGCTGAGTTTCTGTTAATTCATTCACGTATC CAGGCAGAGAAGGAAGAAAATAGCAGGGTCGTTTGTAGTTTGCGAATGTTGGGAATGATAGACGAGGAAATGGTAAAGTG CCTATGCTATAAGAATTTTCTAAGATTTATACCGCCATCGGTTGTGGGAACAATCCTTTCTTTCCTGCCATCTTATTATC TGAATGAGAGTTATGGAATGGGGACGAATGGAATTCTGGCAGGAATCGTATTTGGAGTGATTTTGACAGTCGGAATATTC GTAGTGATACGCAGGTATTCTGAAAAAGAAGAAAAATTTTATGAAAGCGGTTTTATAATACAAGGAAGAGGATTTTTCGA GAGGATTTTTTGA
Upstream 100 bases:
>100_bases CAGGATGGGAATCTGGCAAAAGAAGTAAAGAAAGAGAACACTGCCGATAATTTCAGAGAAGATATATGGAAAACGCTGTG CGGTTTGGGAGGTGGAAAAG
Downstream 100 bases:
>100_bases TTATAGATAAGTAGAAAAAGATTCAAATCCTGTTTATAATTAAAAGATAAAGATAGAGACAACTCGAAGTTTTTAGGGCT AAAGCCAATATAAATAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MTFFDISRKMLKAGFYKYRLYFLCNLSATALFCCFAVISTNRTFMNASIVNSSISNNIYLPFFLSAVFLFFFLPVSCQAF LASRKQEYGVMFSLGMSRKEAFRNLLFENVIISVLALAIALAAGTVLSFLFFSVIIYAIDVHGVQWQFCPEAYKLTAVLY TVVVAVAFILNAGRLMLDKIGTLLKAQYRAEKTGKIGTFLCRLAPNYMRFHLVEWSFVRRHKKEWGCRYVLASLIIAVSV MLTGVCVTLYPAFLQDAKSYSPYDMVYSKIYGMNQVSVQDVLHILEKNGVTVEQVIQLPYIRDDVFNYLPVTEINRDFGC DYQIQEGEFLNLFQYNLEDGYEHNIQPVSTVTISGDRKLQSVGTDVKILFNQNPTFADKTLIINDSDFEKLSADITGSAG IANLFQFQNWEDSYAGVCEVKEYLQESNQLNEDEQTYYELSSKVEKYQDAKKSGQFLLFLMAFVIGLMIMAEFLLIHSRI QAEKEENSRVVCSLRMLGMIDEEMVKCLCYKNFLRFIPPSVVGTILSFLPSYYLNESYGMGTNGILAGIVFGVILTVGIF VVIRRYSEKEEKFYESGFIIQGRGFFERIF
Sequences:
>Translated_590_residues MTFFDISRKMLKAGFYKYRLYFLCNLSATALFCCFAVISTNRTFMNASIVNSSISNNIYLPFFLSAVFLFFFLPVSCQAF LASRKQEYGVMFSLGMSRKEAFRNLLFENVIISVLALAIALAAGTVLSFLFFSVIIYAIDVHGVQWQFCPEAYKLTAVLY TVVVAVAFILNAGRLMLDKIGTLLKAQYRAEKTGKIGTFLCRLAPNYMRFHLVEWSFVRRHKKEWGCRYVLASLIIAVSV MLTGVCVTLYPAFLQDAKSYSPYDMVYSKIYGMNQVSVQDVLHILEKNGVTVEQVIQLPYIRDDVFNYLPVTEINRDFGC DYQIQEGEFLNLFQYNLEDGYEHNIQPVSTVTISGDRKLQSVGTDVKILFNQNPTFADKTLIINDSDFEKLSADITGSAG IANLFQFQNWEDSYAGVCEVKEYLQESNQLNEDEQTYYELSSKVEKYQDAKKSGQFLLFLMAFVIGLMIMAEFLLIHSRI QAEKEENSRVVCSLRMLGMIDEEMVKCLCYKNFLRFIPPSVVGTILSFLPSYYLNESYGMGTNGILAGIVFGVILTVGIF VVIRRYSEKEEKFYESGFIIQGRGFFERIF >Mature_589_residues TFFDISRKMLKAGFYKYRLYFLCNLSATALFCCFAVISTNRTFMNASIVNSSISNNIYLPFFLSAVFLFFFLPVSCQAFL ASRKQEYGVMFSLGMSRKEAFRNLLFENVIISVLALAIALAAGTVLSFLFFSVIIYAIDVHGVQWQFCPEAYKLTAVLYT VVVAVAFILNAGRLMLDKIGTLLKAQYRAEKTGKIGTFLCRLAPNYMRFHLVEWSFVRRHKKEWGCRYVLASLIIAVSVM LTGVCVTLYPAFLQDAKSYSPYDMVYSKIYGMNQVSVQDVLHILEKNGVTVEQVIQLPYIRDDVFNYLPVTEINRDFGCD YQIQEGEFLNLFQYNLEDGYEHNIQPVSTVTISGDRKLQSVGTDVKILFNQNPTFADKTLIINDSDFEKLSADITGSAGI ANLFQFQNWEDSYAGVCEVKEYLQESNQLNEDEQTYYELSSKVEKYQDAKKSGQFLLFLMAFVIGLMIMAEFLLIHSRIQ AEKEENSRVVCSLRMLGMIDEEMVKCLCYKNFLRFIPPSVVGTILSFLPSYYLNESYGMGTNGILAGIVFGVILTVGIFV VIRRYSEKEEKFYESGFIIQGRGFFERIF
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67371; Mature: 67240
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFDISRKMLKAGFYKYRLYFLCNLSATALFCCFAVISTNRTFMNASIVNSSISNNIYL CCHHHHHHHHHHHHHHHEEEHEEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCEEH PFFLSAVFLFFFLPVSCQAFLASRKQEYGVMFSLGMSRKEAFRNLLFENVIISVLALAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH LAAGTVLSFLFFSVIIYAIDVHGVQWQFCPEAYKLTAVLYTVVVAVAFILNAGRLMLDKI HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GTLLKAQYRAEKTGKIGTFLCRLAPNYMRFHLVEWSFVRRHKKEWGCRYVLASLIIAVSV HHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLTGVCVTLYPAFLQDAKSYSPYDMVYSKIYGMNQVSVQDVLHILEKNGVTVEQVIQLPY HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCC IRDDVFNYLPVTEINRDFGCDYQIQEGEFLNLFQYNLEDGYEHNIQPVSTVTISGDRKLQ HHHHHHCCCCHHHCCCCCCCCEEECCCCEEEHEEECCCCCCCCCCCCEEEEEECCCCHHH SVGTDVKILFNQNPTFADKTLIINDSDFEKLSADITGSAGIANLFQFQNWEDSYAGVCEV HCCCCEEEEECCCCCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHH KEYLQESNQLNEDEQTYYELSSKVEKYQDAKKSGQFLLFLMAFVIGLMIMAEFLLIHSRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QAEKEENSRVVCSLRMLGMIDEEMVKCLCYKNFLRFIPPSVVGTILSFLPSYYLNESYGM HHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC GTNGILAGIVFGVILTVGIFVVIRRYSEKEEKFYESGFIIQGRGFFERIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCC >Mature Secondary Structure TFFDISRKMLKAGFYKYRLYFLCNLSATALFCCFAVISTNRTFMNASIVNSSISNNIYL CHHHHHHHHHHHHHHHEEEHEEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCEEH PFFLSAVFLFFFLPVSCQAFLASRKQEYGVMFSLGMSRKEAFRNLLFENVIISVLALAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH LAAGTVLSFLFFSVIIYAIDVHGVQWQFCPEAYKLTAVLYTVVVAVAFILNAGRLMLDKI HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GTLLKAQYRAEKTGKIGTFLCRLAPNYMRFHLVEWSFVRRHKKEWGCRYVLASLIIAVSV HHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLTGVCVTLYPAFLQDAKSYSPYDMVYSKIYGMNQVSVQDVLHILEKNGVTVEQVIQLPY HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCC IRDDVFNYLPVTEINRDFGCDYQIQEGEFLNLFQYNLEDGYEHNIQPVSTVTISGDRKLQ HHHHHHCCCCHHHCCCCCCCCEEECCCCEEEHEEECCCCCCCCCCCCEEEEEECCCCHHH SVGTDVKILFNQNPTFADKTLIINDSDFEKLSADITGSAGIANLFQFQNWEDSYAGVCEV HCCCCEEEEECCCCCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHH KEYLQESNQLNEDEQTYYELSSKVEKYQDAKKSGQFLLFLMAFVIGLMIMAEFLLIHSRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QAEKEENSRVVCSLRMLGMIDEEMVKCLCYKNFLRFIPPSVVGTILSFLPSYYLNESYGM HHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC GTNGILAGIVFGVILTVGIFVVIRRYSEKEEKFYESGFIIQGRGFFERIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA