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The map label for this gene is ywaC [H]

Identifier: 238922425

GI number: 238922425

Start: 620971

End: 621651

Strand: Reverse

Name: ywaC [H]

Synonym: EUBELI_20661

Alternate gene names: 238922425

Gene position: 621651-620971 (Counterclockwise)

Preceding gene: 238922427

Following gene: 238922424

Centisome position: 99.19

GC content: 31.13

Gene sequence:

>681_bases
ATGACAAAAGATGAAGTAAAAAAACTCAGGATGAACAGTCCGGAATCACTACAGTTTTTAAATAATGCTACAAAATTTTA
TAATTTAATGATGATGTATCGTTGTGCTATTCGGGAGATACAAACTAAACTTGAGGTTTTGGATGATGAATTTTCAGTTG
AGAACAATCGAAATCCTATTTCTTTTATAAAAACAAGAATTAAGCAGCCCAATAGTATTTACGATAAACTGCAGAAGATG
GGATATGAATTTACAACAGAAAATATACAGACATATCTCAATGATGTAGCAGGCGTTAGAATAGTTTGTGCGTTTATTGA
CGATATTTATATGATATCAGATTTGATTACCCAACAGGATGATATTAAAGTTATTGAAATAAAAGATTATATAAAAAATC
CAAAATCGAATGGTTATCGAAGCTATCATATGATTGTTGAAATACCAGTATTTTTTGCTAAGGGTAAAACACCTATGCGT
GTAGAATTACAGATTCGAACCAATGGTATGGATTTCTGGGCAACATTGGAACATCAACTTCGCTATAAAAAAGGAATTGA
AGAAATGCCTGGCTATGATGAGATAAGTGAAGAATTACTTCATTCTGCAAGAGCAATCATTGAAGCAGATAATGAAATGC
AGAGAATAAAAGACAAAATTGGTATGTTCTACGAAATTTAG

Upstream 100 bases:

>100_bases
GTGATAAAATGATTTGTTATCCAGTAATTCAAGGAGAACGAATCAACTATCAAAATAAATAATGTTTTGAAATCAGGGAT
GAGGTAGAAAGGAAAGTTCC

Downstream 100 bases:

>100_bases
GGAGAAAACTGAGCAAGTAGGAAGGTGGAATATATATGAAACAAGATACTTTAGAGGGCAAAGCAAAAACAAAAAATGGG
GTAAAACGGCTGTGTTTTTC

Product: GTP pyrophosphokinase

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTKDEVKKLRMNSPESLQFLNNATKFYNLMMMYRCAIREIQTKLEVLDDEFSVENNRNPISFIKTRIKQPNSIYDKLQKM
GYEFTTENIQTYLNDVAGVRIVCAFIDDIYMISDLITQQDDIKVIEIKDYIKNPKSNGYRSYHMIVEIPVFFAKGKTPMR
VELQIRTNGMDFWATLEHQLRYKKGIEEMPGYDEISEELLHSARAIIEADNEMQRIKDKIGMFYEI

Sequences:

>Translated_226_residues
MTKDEVKKLRMNSPESLQFLNNATKFYNLMMMYRCAIREIQTKLEVLDDEFSVENNRNPISFIKTRIKQPNSIYDKLQKM
GYEFTTENIQTYLNDVAGVRIVCAFIDDIYMISDLITQQDDIKVIEIKDYIKNPKSNGYRSYHMIVEIPVFFAKGKTPMR
VELQIRTNGMDFWATLEHQLRYKKGIEEMPGYDEISEELLHSARAIIEADNEMQRIKDKIGMFYEI
>Mature_225_residues
TKDEVKKLRMNSPESLQFLNNATKFYNLMMMYRCAIREIQTKLEVLDDEFSVENNRNPISFIKTRIKQPNSIYDKLQKMG
YEFTTENIQTYLNDVAGVRIVCAFIDDIYMISDLITQQDDIKVIEIKDYIKNPKSNGYRSYHMIVEIPVFFAKGKTPMRV
ELQIRTNGMDFWATLEHQLRYKKGIEEMPGYDEISEELLHSARAIIEADNEMQRIKDKIGMFYEI

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 26731; Mature: 26600

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKDEVKKLRMNSPESLQFLNNATKFYNLMMMYRCAIREIQTKLEVLDDEFSVENNRNPI
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHH
SFIKTRIKQPNSIYDKLQKMGYEFTTENIQTYLNDVAGVRIVCAFIDDIYMISDLITQQD
HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIKVIEIKDYIKNPKSNGYRSYHMIVEIPVFFAKGKTPMRVELQIRTNGMDFWATLEHQL
CEEEEEEHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHH
RYKKGIEEMPGYDEISEELLHSARAIIEADNEMQRIKDKIGMFYEI
HHHHCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECC
>Mature Secondary Structure 
TKDEVKKLRMNSPESLQFLNNATKFYNLMMMYRCAIREIQTKLEVLDDEFSVENNRNPI
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHH
SFIKTRIKQPNSIYDKLQKMGYEFTTENIQTYLNDVAGVRIVCAFIDDIYMISDLITQQD
HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIKVIEIKDYIKNPKSNGYRSYHMIVEIPVFFAKGKTPMRVELQIRTNGMDFWATLEHQL
CEEEEEEHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHH
RYKKGIEEMPGYDEISEELLHSARAIIEADNEMQRIKDKIGMFYEI
HHHHCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]