| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is 238922178
Identifier: 238922178
GI number: 238922178
Start: 375130
End: 376557
Strand: Reverse
Name: 238922178
Synonym: EUBELI_20413
Alternate gene names: NA
Gene position: 376557-375130 (Counterclockwise)
Preceding gene: 238922179
Following gene: 238922177
Centisome position: 60.08
GC content: 35.43
Gene sequence:
>1428_bases ATGAACCAGAAAAGTAAGAGATTTCAGACAAGAATGCTTACATATGGTGTTCTGGTAGTATTCTGCCTGATTGTTATTGG TATTTTTATATACAGCTATATTTCAAGATATCACATGGGAAAGCTGGATATAAAGTCAAGATATACATTCAGTGTAGATG TTGGCGCTGATGATGAGGGCTATTCAGAAAGAAATATCAAAGAACTTTCGAAGGAATGGTTTGATGGATATATAAGCCAG TTCAGGCAGAAATATATTTCATATTCCATGGCTGTAAGAAAATATGGTCTGGATTCAGTCACTATGCTTGATTCTGCAAG TAATACAGTGCTTCTGTCATTTTGGATTGTACCACAGGATACAAATTCTGATTATTTTTCATCATGGGATGGAATAATGG ATAATGGGGTACTTAAATGTGAATGGGTTGTGACATTTTATATGGACGATAATTTTAATGGAACATCTACACTTTATGTT ACATCTATGATGAGTTCAGAAGATTATGGATTAAAACAGTATTATGCTAATCTTGGTATTGATTCTGGTGGCGATACAGA GGTCACGACTAATTCCAATAAGGACGAGCTTGCTAATTATGCTATAAAAGAGAATTCTTTATATGTTACATATGATGGCG GCGAGAAATATATAACTGTACCTGTATCGTATTCATATCTTTTATATGAAGATAACAGTACAACAAGCCTGAAACAGGAT AGTTATATGATAACAACAGGTAAAACAGCATTTGTTTATGGAGGGAAGACCGCTAACAGTACTAAGGTTCCGGTTACAGT TATTTATTCTGATGATAAGGGAGAAAACTGGACTACATGTGAACTTGATAATATATATAATGCTGATTATTATTATGTGA AGTTCTTTGATTCTGATAACGGAGTTGTTGTATGTGGATATGCTAAAAGTAATGACACTAATGAATCATCAAAGATATAT AAGACCTCTAATGGAGGTGAAAGCTGGGACATGGTGGGAAGCGGCCCTGCTACTAATATTATAAAGGGAGTTGTTTATGT TTCTGCGGATGTCGGCTTTTTCTGTTATGATTATGTAGATGGCATGGACAGCAATTTATATAAGACTGATGACGGTGGAA AAACATTTGCAAAGGTGATGCTTGAAGCACAGGAACTGGATAGTTCGGCAGCAAATAGTCAGAACCAGGAAACAAAATCT GACAGCGGAACGACATATGGAACATCAGAATCAACAGAACAACTGAAATGGAATGACGTATACAAAGAAGCATTAGTGCC GGTTGTTGATTCTACGGGATTAATAACTATTTATCTTACACAGGGAAAGAATGGCATGTATAATGATGGTAAAACAGCAG CAAAATACCAGTCTTCAGATAATGGAAGCACATGGAAGTATATAGGCCAGATGGAGATAAAAGATTAA
Upstream 100 bases:
>100_bases AGCTGGTGCCATGTACTTCTTGTGGTGGTATAAATATTACAGGGTGATTATAAGAGAAGCAATGCATAATAAAAGAGAAT TTTAATGACAGGAGGCAGCT
Downstream 100 bases:
>100_bases AAATTTATTAAAAACAATTTTAATATTTACATAATATAAATACGCGTGGTAATATAATATCTGTAAAGGTATTCTGTTAT GCGCGTATTTTGTTTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MNQKSKRFQTRMLTYGVLVVFCLIVIGIFIYSYISRYHMGKLDIKSRYTFSVDVGADDEGYSERNIKELSKEWFDGYISQ FRQKYISYSMAVRKYGLDSVTMLDSASNTVLLSFWIVPQDTNSDYFSSWDGIMDNGVLKCEWVVTFYMDDNFNGTSTLYV TSMMSSEDYGLKQYYANLGIDSGGDTEVTTNSNKDELANYAIKENSLYVTYDGGEKYITVPVSYSYLLYEDNSTTSLKQD SYMITTGKTAFVYGGKTANSTKVPVTVIYSDDKGENWTTCELDNIYNADYYYVKFFDSDNGVVVCGYAKSNDTNESSKIY KTSNGGESWDMVGSGPATNIIKGVVYVSADVGFFCYDYVDGMDSNLYKTDDGGKTFAKVMLEAQELDSSAANSQNQETKS DSGTTYGTSESTEQLKWNDVYKEALVPVVDSTGLITIYLTQGKNGMYNDGKTAAKYQSSDNGSTWKYIGQMEIKD
Sequences:
>Translated_475_residues MNQKSKRFQTRMLTYGVLVVFCLIVIGIFIYSYISRYHMGKLDIKSRYTFSVDVGADDEGYSERNIKELSKEWFDGYISQ FRQKYISYSMAVRKYGLDSVTMLDSASNTVLLSFWIVPQDTNSDYFSSWDGIMDNGVLKCEWVVTFYMDDNFNGTSTLYV TSMMSSEDYGLKQYYANLGIDSGGDTEVTTNSNKDELANYAIKENSLYVTYDGGEKYITVPVSYSYLLYEDNSTTSLKQD SYMITTGKTAFVYGGKTANSTKVPVTVIYSDDKGENWTTCELDNIYNADYYYVKFFDSDNGVVVCGYAKSNDTNESSKIY KTSNGGESWDMVGSGPATNIIKGVVYVSADVGFFCYDYVDGMDSNLYKTDDGGKTFAKVMLEAQELDSSAANSQNQETKS DSGTTYGTSESTEQLKWNDVYKEALVPVVDSTGLITIYLTQGKNGMYNDGKTAAKYQSSDNGSTWKYIGQMEIKD >Mature_475_residues MNQKSKRFQTRMLTYGVLVVFCLIVIGIFIYSYISRYHMGKLDIKSRYTFSVDVGADDEGYSERNIKELSKEWFDGYISQ FRQKYISYSMAVRKYGLDSVTMLDSASNTVLLSFWIVPQDTNSDYFSSWDGIMDNGVLKCEWVVTFYMDDNFNGTSTLYV TSMMSSEDYGLKQYYANLGIDSGGDTEVTTNSNKDELANYAIKENSLYVTYDGGEKYITVPVSYSYLLYEDNSTTSLKQD SYMITTGKTAFVYGGKTANSTKVPVTVIYSDDKGENWTTCELDNIYNADYYYVKFFDSDNGVVVCGYAKSNDTNESSKIY KTSNGGESWDMVGSGPATNIIKGVVYVSADVGFFCYDYVDGMDSNLYKTDDGGKTFAKVMLEAQELDSSAANSQNQETKS DSGTTYGTSESTEQLKWNDVYKEALVPVVDSTGLITIYLTQGKNGMYNDGKTAAKYQSSDNGSTWKYIGQMEIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53322; Mature: 53322
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKSKRFQTRMLTYGVLVVFCLIVIGIFIYSYISRYHMGKLDIKSRYTFSVDVGADDEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCC YSERNIKELSKEWFDGYISQFRQKYISYSMAVRKYGLDSVTMLDSASNTVLLSFWIVPQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECC TNSDYFSSWDGIMDNGVLKCEWVVTFYMDDNFNGTSTLYVTSMMSSEDYGLKQYYANLGI CCCCHHHCCCCHHCCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHCCC DSGGDTEVTTNSNKDELANYAIKENSLYVTYDGGEKYITVPVSYSYLLYEDNSTTSLKQD CCCCCCEEECCCCHHHHHHEEEECCCEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCC SYMITTGKTAFVYGGKTANSTKVPVTVIYSDDKGENWTTCELDNIYNADYYYVKFFDSDN CEEEEECCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCEECCCEEEEEEEECCC GVVVCGYAKSNDTNESSKIYKTSNGGESWDMVGSGPATNIIKGVVYVSADVGFFCYDYVD CEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEEEEEEEEECCCEEEEEHHC GMDSNLYKTDDGGKTFAKVMLEAQELDSSAANSQNQETKSDSGTTYGTSESTEQLKWNDV CCCCCCEECCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH YKEALVPVVDSTGLITIYLTQGKNGMYNDGKTAAKYQSSDNGSTWKYIGQMEIKD HHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECC >Mature Secondary Structure MNQKSKRFQTRMLTYGVLVVFCLIVIGIFIYSYISRYHMGKLDIKSRYTFSVDVGADDEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCC YSERNIKELSKEWFDGYISQFRQKYISYSMAVRKYGLDSVTMLDSASNTVLLSFWIVPQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECC TNSDYFSSWDGIMDNGVLKCEWVVTFYMDDNFNGTSTLYVTSMMSSEDYGLKQYYANLGI CCCCHHHCCCCHHCCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHCCC DSGGDTEVTTNSNKDELANYAIKENSLYVTYDGGEKYITVPVSYSYLLYEDNSTTSLKQD CCCCCCEEECCCCHHHHHHEEEECCCEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCC SYMITTGKTAFVYGGKTANSTKVPVTVIYSDDKGENWTTCELDNIYNADYYYVKFFDSDN CEEEEECCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCEECCCEEEEEEEECCC GVVVCGYAKSNDTNESSKIYKTSNGGESWDMVGSGPATNIIKGVVYVSADVGFFCYDYVD CEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEEEEEEEEECCCEEEEEHHC GMDSNLYKTDDGGKTFAKVMLEAQELDSSAANSQNQETKSDSGTTYGTSESTEQLKWNDV CCCCCCEECCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH YKEALVPVVDSTGLITIYLTQGKNGMYNDGKTAAKYQSSDNGSTWKYIGQMEIKD HHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA