| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
Click here to switch to the map view.
The map label for this gene is 238922158
Identifier: 238922158
GI number: 238922158
Start: 352025
End: 353107
Strand: Reverse
Name: 238922158
Synonym: EUBELI_20393
Alternate gene names: NA
Gene position: 353107-352025 (Counterclockwise)
Preceding gene: 238922159
Following gene: 238922157
Centisome position: 56.34
GC content: 40.9
Gene sequence:
>1083_bases ATGGGAAAGAAAATTGCCAGAATTATAGGCAGAGTATTACTGGTGGTACTTGTTACTATAGTAATGCTGGTGGGAACTTT ATTCATTATGATTAAGAGAATATGCAGCGATTCAGCACCTGCAGCCAGAAATCTTTTTATATCAACAGTTCTTGAATCAG GTCAGATGAAGTTTCTGGCTTCGTGGTTCTGTACAGATGCGCAGATTAATGAGGTAATTAATGCTAATAAGATGGAGTCA ATGGATTCAGATATTGATACATCTCTCATTAATATATCAACAGACACAGATACACAGACGGTTGACAATAAAGGAGAGGT AGAGCAGTTTGACGGGAATGGAATAAGAATGGTTGAGATTTCAGGAAGGTCATTCTTTGGAAAAATGCTGATTATAAAAG ATCCGTCACAGGTTAAGGTCGGAACTACATACCCATGGGGAGATTACGGTAAGGAGCTTCATGAGATTGTAAGCGGAGCA GGAGCTATTGCAGGAGTTAACGGTGGTCTGTATGTTTCATCAGGAAACAGAGGCGGCTCACCACTTGGAATTGTAGTGCA GGACGGTAAGATTACATATAACAGTCCTTCAGCACTTTCCGGTCTTTACCTAATCGGACTTAATAAGGACAACCTTTTAG TTGTTAAAGATATAGATGGTATGTCGGCAGCAGATTTTGAAAGCTATGTAAATGAAGCCGGGATCAGGGATGCTGTTGCT TTCCAGGAGGAAAGCTCTGATTCTAATAATCATTTTGTTCCGCTTATTATTAACAATGAAGCAAGAGTATTGAAAGGTCA GGGAAGCGGGGCTAACCCAAGAACAGCAATCGGACAGAGAGTTGACGGTGCAATACTTCTTTTAGTTACAGATGGAAGAG GTGCTTCAGGACATCTTGGTGCAACTGCGTCAGACCTGATATCAGTCATGCAGGAATATGGAGCAGTCAATGCAGCCAAC CTTGATGGCGGAAGTTCTTCAACAATGGTATATAACGGTGGCTATGAGATGACAAGTGTAACATTTTATTATCAGAATTC ATCATGGAAGCTGCCAACAGCATTTGTCGTAATGCCTAAGTAA
Upstream 100 bases:
>100_bases TATTAGTGATATAATAATTAATATTTTCAGTATTTCAGGTTCAGTGATATCTAATGCAATGAGGCTGGAATAATATATAA CACAGAATAGGGAGAAAATT
Downstream 100 bases:
>100_bases TTGGAAGGAGAACTGTGTAGATATGAAAAATAATGCTAAGAAGTCTATAAAGATAGGTGGAATCAATATACCATTAAATT ACTGGACAGGGATTGCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Gram-Positive Signal Peptide YSIRK Family; Peptidase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MGKKIARIIGRVLLVVLVTIVMLVGTLFIMIKRICSDSAPAARNLFISTVLESGQMKFLASWFCTDAQINEVINANKMES MDSDIDTSLINISTDTDTQTVDNKGEVEQFDGNGIRMVEISGRSFFGKMLIIKDPSQVKVGTTYPWGDYGKELHEIVSGA GAIAGVNGGLYVSSGNRGGSPLGIVVQDGKITYNSPSALSGLYLIGLNKDNLLVVKDIDGMSAADFESYVNEAGIRDAVA FQEESSDSNNHFVPLIINNEARVLKGQGSGANPRTAIGQRVDGAILLLVTDGRGASGHLGATASDLISVMQEYGAVNAAN LDGGSSSTMVYNGGYEMTSVTFYYQNSSWKLPTAFVVMPK
Sequences:
>Translated_360_residues MGKKIARIIGRVLLVVLVTIVMLVGTLFIMIKRICSDSAPAARNLFISTVLESGQMKFLASWFCTDAQINEVINANKMES MDSDIDTSLINISTDTDTQTVDNKGEVEQFDGNGIRMVEISGRSFFGKMLIIKDPSQVKVGTTYPWGDYGKELHEIVSGA GAIAGVNGGLYVSSGNRGGSPLGIVVQDGKITYNSPSALSGLYLIGLNKDNLLVVKDIDGMSAADFESYVNEAGIRDAVA FQEESSDSNNHFVPLIINNEARVLKGQGSGANPRTAIGQRVDGAILLLVTDGRGASGHLGATASDLISVMQEYGAVNAAN LDGGSSSTMVYNGGYEMTSVTFYYQNSSWKLPTAFVVMPK >Mature_359_residues GKKIARIIGRVLLVVLVTIVMLVGTLFIMIKRICSDSAPAARNLFISTVLESGQMKFLASWFCTDAQINEVINANKMESM DSDIDTSLINISTDTDTQTVDNKGEVEQFDGNGIRMVEISGRSFFGKMLIIKDPSQVKVGTTYPWGDYGKELHEIVSGAG AIAGVNGGLYVSSGNRGGSPLGIVVQDGKITYNSPSALSGLYLIGLNKDNLLVVKDIDGMSAADFESYVNEAGIRDAVAF QEESSDSNNHFVPLIINNEARVLKGQGSGANPRTAIGQRVDGAILLLVTDGRGASGHLGATASDLISVMQEYGAVNAANL DGGSSSTMVYNGGYEMTSVTFYYQNSSWKLPTAFVVMPK
Specific function: Unknown
COG id: COG4632
COG function: function code G; Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38354; Mature: 38223
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKIARIIGRVLLVVLVTIVMLVGTLFIMIKRICSDSAPAARNLFISTVLESGQMKFLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEH SWFCTDAQINEVINANKMESMDSDIDTSLINISTDTDTQTVDNKGEVEQFDGNGIRMVEI HHHCCCHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEE SGRSFFGKMLIIKDPSQVKVGTTYPWGDYGKELHEIVSGAGAIAGVNGGLYVSSGNRGGS CCCCEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCC PLGIVVQDGKITYNSPSALSGLYLIGLNKDNLLVVKDIDGMSAADFESYVNEAGIRDAVA EEEEEEECCEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHE FQEESSDSNNHFVPLIINNEARVLKGQGSGANPRTAIGQRVDGAILLLVTDGRGASGHLG ECCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCC ATASDLISVMQEYGAVNAANLDGGSSSTMVYNGGYEMTSVTFYYQNSSWKLPTAFVVMPK CCHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure GKKIARIIGRVLLVVLVTIVMLVGTLFIMIKRICSDSAPAARNLFISTVLESGQMKFLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEH SWFCTDAQINEVINANKMESMDSDIDTSLINISTDTDTQTVDNKGEVEQFDGNGIRMVEI HHHCCCHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEE SGRSFFGKMLIIKDPSQVKVGTTYPWGDYGKELHEIVSGAGAIAGVNGGLYVSSGNRGGS CCCCEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCC PLGIVVQDGKITYNSPSALSGLYLIGLNKDNLLVVKDIDGMSAADFESYVNEAGIRDAVA EEEEEEECCEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHE FQEESSDSNNHFVPLIINNEARVLKGQGSGANPRTAIGQRVDGAILLLVTDGRGASGHLG ECCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCC ATASDLISVMQEYGAVNAANLDGGSSSTMVYNGGYEMTSVTFYYQNSSWKLPTAFVVMPK CCHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA