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The map label for this gene is capC [H]

Identifier: 238922086

GI number: 238922086

Start: 271477

End: 272220

Strand: Reverse

Name: capC [H]

Synonym: EUBELI_20321

Alternate gene names: 238922086

Gene position: 272220-271477 (Counterclockwise)

Preceding gene: 238922087

Following gene: 238922085

Centisome position: 43.43

GC content: 38.17

Gene sequence:

>744_bases
ATGTTATTTGGAAAGAAGAAAAAGGCAGCGGATTATATCGTAGATGTTCATTGCCATATCCTTCCGGGAATAGATGATGG
CTCAAGGGATATGTCTGAGACATTAAAGATGCTGGAAATCGCACATAATGAGGGGATAACGCATATTATTGCGACACCAC
ATTTTAAAAGCGGACATCACAATGCTTCACCAGAGAAGGTAAGTGCGCTTATTGATGAGGTACAGGAAGCAGCAGATGAA
TGTAATTTAGGAATAAAGTTATATCAGGGAAATGAAATCCTGTATCATGATGAATTATGTGAAGGTGTTGACAGCGGACG
CATCAGCAGGATGAATGGGACAGATTATGTACTTGTTGAATTTATGCCATCTGATCCATATCAGTATATACGTAATTCAT
TAGATGAGATAATGAGTGAAGGCTATCAGCCAATTATTGCGCATGTTGAGCGGTATGGATGTATGGTAGATGATATTGAA
AATGTGCGTGAAATCAAGAATATGGGTGTAGAAATTCAGGTTAATGCATCAAGCATACTTGGTGATATAGGCAAGGATAT
AAAGAAATTTCTACAGAAACTGCTTAGTGAGCAGATAGTTGATTATGTCGGAACTGATTCACACCGATGTGAAGGCAGCC
GTACACCTAAGATTCAGGAATGTGCCGACATGCTGTATAAAAAATATAATGAACAGTATGTTGATGATATATTATATGGC
AATGCCATGGACAGGCTTTTATAG

Upstream 100 bases:

>100_bases
AGTTTGGTTGACATTACTATTGCACATTGTTAAGATATTTAAGGCTTATTTAAAGTTAACCTATTATAAATAAGAAGAAT
CACAAAGTACAGGGAATAGT

Downstream 100 bases:

>100_bases
AATGTCAGAATAAGATTAAGGAGATTATATAATGCAGGAAAAAAGTAAAGAGACAGAGAACATTGAAATAGACCTCCGTG
AAATATTTGGAGTATTAATT

Product: protein-tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLFGKKKKAADYIVDVHCHILPGIDDGSRDMSETLKMLEIAHNEGITHIIATPHFKSGHHNASPEKVSALIDEVQEAADE
CNLGIKLYQGNEILYHDELCEGVDSGRISRMNGTDYVLVEFMPSDPYQYIRNSLDEIMSEGYQPIIAHVERYGCMVDDIE
NVREIKNMGVEIQVNASSILGDIGKDIKKFLQKLLSEQIVDYVGTDSHRCEGSRTPKIQECADMLYKKYNEQYVDDILYG
NAMDRLL

Sequences:

>Translated_247_residues
MLFGKKKKAADYIVDVHCHILPGIDDGSRDMSETLKMLEIAHNEGITHIIATPHFKSGHHNASPEKVSALIDEVQEAADE
CNLGIKLYQGNEILYHDELCEGVDSGRISRMNGTDYVLVEFMPSDPYQYIRNSLDEIMSEGYQPIIAHVERYGCMVDDIE
NVREIKNMGVEIQVNASSILGDIGKDIKKFLQKLLSEQIVDYVGTDSHRCEGSRTPKIQECADMLYKKYNEQYVDDILYG
NAMDRLL
>Mature_247_residues
MLFGKKKKAADYIVDVHCHILPGIDDGSRDMSETLKMLEIAHNEGITHIIATPHFKSGHHNASPEKVSALIDEVQEAADE
CNLGIKLYQGNEILYHDELCEGVDSGRISRMNGTDYVLVEFMPSDPYQYIRNSLDEIMSEGYQPIIAHVERYGCMVDDIE
NVREIKNMGVEIQVNASSILGDIGKDIKKFLQKLLSEQIVDYVGTDSHRCEGSRTPKIQECADMLYKKYNEQYVDDILYG
NAMDRLL

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 27964; Mature: 27964

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGKKKKAADYIVDVHCHILPGIDDGSRDMSETLKMLEIAHNEGITHIIATPHFKSGHH
CCCCCCCHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
NASPEKVSALIDEVQEAADECNLGIKLYQGNEILYHDELCEGVDSGRISRMNGTDYVLVE
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEHHHHHCCCCCCCEEECCCCCEEEEE
FMPSDPYQYIRNSLDEIMSEGYQPIIAHVERYGCMVDDIENVREIKNMGVEIQVNASSIL
ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHH
GDIGKDIKKFLQKLLSEQIVDYVGTDSHRCEGSRTPKIQECADMLYKKYNEQYVDDILYG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NAMDRLL
CHHHHCC
>Mature Secondary Structure
MLFGKKKKAADYIVDVHCHILPGIDDGSRDMSETLKMLEIAHNEGITHIIATPHFKSGHH
CCCCCCCHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
NASPEKVSALIDEVQEAADECNLGIKLYQGNEILYHDELCEGVDSGRISRMNGTDYVLVE
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEHHHHHCCCCCCCEEECCCCCEEEEE
FMPSDPYQYIRNSLDEIMSEGYQPIIAHVERYGCMVDDIENVREIKNMGVEIQVNASSIL
ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHH
GDIGKDIKKFLQKLLSEQIVDYVGTDSHRCEGSRTPKIQECADMLYKKYNEQYVDDILYG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NAMDRLL
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]