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The map label for this gene is trg [C]

Identifier: 238922052

GI number: 238922052

Start: 235455

End: 237173

Strand: Reverse

Name: trg [C]

Synonym: EUBELI_20287

Alternate gene names: 238922052

Gene position: 237173-235455 (Counterclockwise)

Preceding gene: 238922053

Following gene: 238922051

Centisome position: 37.84

GC content: 44.33

Gene sequence:

>1719_bases
ATGGAAAAGATTAAAAAGCGTATAGCTAACTTAAAGGTTGCAGGGAAATTAAAAGTATATCGAATGACAGTACTTGTTAT
GACATTATTTTTAGTGTTGGTGGCACTGATCTCAACATTAGTGATCCGTTCAAATATAGAGAAGATCACGGAGGTCTGGT
CTCCGTCATTGGAATATCTGCAGGATTTAGAGACAATGACTGCGAAATACAGAATCAAACAGTATCAGCATCTGGTAGAA
TCAGATGCAGCAGTCATGAACTCCTGCGAAGAAGAAATCCAGAAGCTGGAGAGTCAGATCCAGGATACCTGTGCGAAGCT
GAATGCGATTATCACTGCAGACAGTGATGCTCAAAAAGGACAAGCTGATTATGAAGCAGCAAGCACAGGATGGGAAAAAT
ACAGGGCTGCTTCAGATGAAATCCTGCAGTTGAGCCGTGAGAATAAACAGCAGGAAGCAGCAAGGCTGATGATCGGAGAG
GCGTATGAAGAATATAATGCTTTTGCTGAGAAATTAACTATATTAAGTGACGAGTTCCAGATAGAATTAGATCAGGCAAA
GACCATGGCCAATGTATGCACCATCATCATATTTGTCGTGATTGTGGCAGCGGGCCTTGCGATTGCTGTAGTGACGACAC
TGATCGGAAAGATCATTACCAATTCCATTACTGAGCCGGTAGAACAGATAGATGCAGCAGTTGCCAGCCTGCGTAAGGGC
GAACTGTCTAATGTAGAAATGCTTACCTATGAGTCTGAAGATGAGCTTGGCGATACCATTAAGAATCTGAAAGAAGCCAT
GGGTATTCTGGCAGATTATGTCAGCGAGATTTCTGTGGAGGTAAAGGCAATAGCGCAGGGTGACCTGACCAGAAATGGTG
ATGATATTACAGATTTCCTAGGCGATTTCTCGGAATTGAAGACATCACTGCTGTATATTCTGAAACGGTTTAACAGTACC
CTGACCGAGATCAGAAATCTGGCAGAACAGGTATCATCGAATGCATCCGAGGTGGAAAATGCATCAAAATCCCTGGCGGA
CGGTGCAACAGAGCAGGCAGGAGTCATCGAGGAATTGAATGCCACCATTGATACGGTCGTGGATCTGGCGGCAGATACAG
CGAAGGAAACACAGAGCGCATCTGCACGTGTAAAAGCTTCTGCAGATAAAGCGAACGAAGAAAAAGAAAAAATGAACGAT
CTGCTGATGGAAATGGAGCACATTACAGAAATCTCCAAGGAGATCGGTAATATTATCACAGATATCGAGGATATTGCATC
CCAGACCAACCTGTTATCCCTGAATGCTTCCATTGAAGCTGCCAGAGCAGGAGAAGCAGGAAAAGGCTTTGCAGTAGTGG
CAGATCAGATCGGCAAGCTGGCAGCAGACAGTGCAAAATCTGCCGTAAATACAAGAGATCTGATCGATAAGACCTTAGTG
GAAATCGAAAATGGCAATACGATTACAAGAACAACAGCAGACGCATTCAATCAGATCATTGCAGATATGGAGTCCTTTGC
AGAGATTGCACAGAACACCATGGAGAAAGCAAACTCCCAGGCAGAGTCCTTGGAACAGATCGGTCAGGGAATTGAACAGC
TGTCCGGTGTGGTACAGGGCAATGCAGCATCCTCAGAAGAGAATACTGCAATCAGTATTAATCTGGCAGAGGGAGCAGCC
AAGATGCATGACCGCGTGAATATTTTTAAGTTATTCTAG

Upstream 100 bases:

>100_bases
TTTTATAGACTTTTCCAATAAAGTATGCTATTTTATAGCAGCTTATGGATAAACAAATGTGATAAAAGATCAATAATTTA
CAAAGAAAGGGAAAACTATC

Downstream 100 bases:

>100_bases
AAAATGACAGGAATAGAGTGAAGTATTCATAAGGAAGGTTATTGTTGTGATTAATGATATATTTAAATTATTTGGAGAGA
AGGCAGCTGATATTTTATTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MEKIKKRIANLKVAGKLKVYRMTVLVMTLFLVLVALISTLVIRSNIEKITEVWSPSLEYLQDLETMTAKYRIKQYQHLVE
SDAAVMNSCEEEIQKLESQIQDTCAKLNAIITADSDAQKGQADYEAASTGWEKYRAASDEILQLSRENKQQEAARLMIGE
AYEEYNAFAEKLTILSDEFQIELDQAKTMANVCTIIIFVVIVAAGLAIAVVTTLIGKIITNSITEPVEQIDAAVASLRKG
ELSNVEMLTYESEDELGDTIKNLKEAMGILADYVSEISVEVKAIAQGDLTRNGDDITDFLGDFSELKTSLLYILKRFNST
LTEIRNLAEQVSSNASEVENASKSLADGATEQAGVIEELNATIDTVVDLAADTAKETQSASARVKASADKANEEKEKMND
LLMEMEHITEISKEIGNIITDIEDIASQTNLLSLNASIEAARAGEAGKGFAVVADQIGKLAADSAKSAVNTRDLIDKTLV
EIENGNTITRTTADAFNQIIADMESFAEIAQNTMEKANSQAESLEQIGQGIEQLSGVVQGNAASSEENTAISINLAEGAA
KMHDRVNIFKLF

Sequences:

>Translated_572_residues
MEKIKKRIANLKVAGKLKVYRMTVLVMTLFLVLVALISTLVIRSNIEKITEVWSPSLEYLQDLETMTAKYRIKQYQHLVE
SDAAVMNSCEEEIQKLESQIQDTCAKLNAIITADSDAQKGQADYEAASTGWEKYRAASDEILQLSRENKQQEAARLMIGE
AYEEYNAFAEKLTILSDEFQIELDQAKTMANVCTIIIFVVIVAAGLAIAVVTTLIGKIITNSITEPVEQIDAAVASLRKG
ELSNVEMLTYESEDELGDTIKNLKEAMGILADYVSEISVEVKAIAQGDLTRNGDDITDFLGDFSELKTSLLYILKRFNST
LTEIRNLAEQVSSNASEVENASKSLADGATEQAGVIEELNATIDTVVDLAADTAKETQSASARVKASADKANEEKEKMND
LLMEMEHITEISKEIGNIITDIEDIASQTNLLSLNASIEAARAGEAGKGFAVVADQIGKLAADSAKSAVNTRDLIDKTLV
EIENGNTITRTTADAFNQIIADMESFAEIAQNTMEKANSQAESLEQIGQGIEQLSGVVQGNAASSEENTAISINLAEGAA
KMHDRVNIFKLF
>Mature_572_residues
MEKIKKRIANLKVAGKLKVYRMTVLVMTLFLVLVALISTLVIRSNIEKITEVWSPSLEYLQDLETMTAKYRIKQYQHLVE
SDAAVMNSCEEEIQKLESQIQDTCAKLNAIITADSDAQKGQADYEAASTGWEKYRAASDEILQLSRENKQQEAARLMIGE
AYEEYNAFAEKLTILSDEFQIELDQAKTMANVCTIIIFVVIVAAGLAIAVVTTLIGKIITNSITEPVEQIDAAVASLRKG
ELSNVEMLTYESEDELGDTIKNLKEAMGILADYVSEISVEVKAIAQGDLTRNGDDITDFLGDFSELKTSLLYILKRFNST
LTEIRNLAEQVSSNASEVENASKSLADGATEQAGVIEELNATIDTVVDLAADTAKETQSASARVKASADKANEEKEKMND
LLMEMEHITEISKEIGNIITDIEDIASQTNLLSLNASIEAARAGEAGKGFAVVADQIGKLAADSAKSAVNTRDLIDKTLV
EIENGNTITRTTADAFNQIIADMESFAEIAQNTMEKANSQAESLEQIGQGIEQLSGVVQGNAASSEENTAISINLAEGAA
KMHDRVNIFKLF

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=293, Percent_Identity=30.7167235494881, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1789453, Length=259, Percent_Identity=33.976833976834, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI2367378, Length=308, Percent_Identity=28.5714285714286, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1788195, Length=276, Percent_Identity=26.4492753623188, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1788194, Length=300, Percent_Identity=28.3333333333333, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62314; Mature: 62314

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIKKRIANLKVAGKLKVYRMTVLVMTLFLVLVALISTLVIRSNIEKITEVWSPSLEYL
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QDLETMTAKYRIKQYQHLVESDAAVMNSCEEEIQKLESQIQDTCAKLNAIITADSDAQKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
QADYEAASTGWEKYRAASDEILQLSRENKQQEAARLMIGEAYEEYNAFAEKLTILSDEFQ
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
IELDQAKTMANVCTIIIFVVIVAAGLAIAVVTTLIGKIITNSITEPVEQIDAAVASLRKG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ELSNVEMLTYESEDELGDTIKNLKEAMGILADYVSEISVEVKAIAQGDLTRNGDDITDFL
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
GDFSELKTSLLYILKRFNSTLTEIRNLAEQVSSNASEVENASKSLADGATEQAGVIEELN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
ATIDTVVDLAADTAKETQSASARVKASADKANEEKEKMNDLLMEMEHITEISKEIGNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIEDIASQTNLLSLNASIEAARAGEAGKGFAVVADQIGKLAADSAKSAVNTRDLIDKTLV
HHHHHHHHCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIENGNTITRTTADAFNQIIADMESFAEIAQNTMEKANSQAESLEQIGQGIEQLSGVVQG
HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAASSEENTAISINLAEGAAKMHDRVNIFKLF
CCCCCCCCCEEEEEEHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MEKIKKRIANLKVAGKLKVYRMTVLVMTLFLVLVALISTLVIRSNIEKITEVWSPSLEYL
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QDLETMTAKYRIKQYQHLVESDAAVMNSCEEEIQKLESQIQDTCAKLNAIITADSDAQKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
QADYEAASTGWEKYRAASDEILQLSRENKQQEAARLMIGEAYEEYNAFAEKLTILSDEFQ
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
IELDQAKTMANVCTIIIFVVIVAAGLAIAVVTTLIGKIITNSITEPVEQIDAAVASLRKG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ELSNVEMLTYESEDELGDTIKNLKEAMGILADYVSEISVEVKAIAQGDLTRNGDDITDFL
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
GDFSELKTSLLYILKRFNSTLTEIRNLAEQVSSNASEVENASKSLADGATEQAGVIEELN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
ATIDTVVDLAADTAKETQSASARVKASADKANEEKEKMNDLLMEMEHITEISKEIGNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIEDIASQTNLLSLNASIEAARAGEAGKGFAVVADQIGKLAADSAKSAVNTRDLIDKTLV
HHHHHHHHCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIENGNTITRTTADAFNQIIADMESFAEIAQNTMEKANSQAESLEQIGQGIEQLSGVVQG
HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAASSEENTAISINLAEGAAKMHDRVNIFKLF
CCCCCCCCCEEEEEEHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]