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The map label for this gene is sdpR [H]

Identifier: 238922019

GI number: 238922019

Start: 207823

End: 208092

Strand: Reverse

Name: sdpR [H]

Synonym: EUBELI_20254

Alternate gene names: 238922019

Gene position: 208092-207823 (Counterclockwise)

Preceding gene: 238922020

Following gene: 238922017

Centisome position: 33.2

GC content: 33.7

Gene sequence:

>270_bases
GTGAGTGTGGGAAGTGTTTTTAAAGCTATTAGTGACCCAACTAGACGAGAAATTTTGAAACTATTGAATGAGAAAGATTT
AAGTGCTGGAGAAATAGCGGAACATTTTGACATATCGAAACCTGCTTTAACAAAACATCTGAATATCTTACGAGAAGCAG
AGTTAGTTAGTTCAGAAAAGCAAGGAAACTTTGTCATTTATTCAATCAATGTAACAGTACTTCAACAAGCATTGTCTGGA
TTTATGTCTATTTTTGGAAAAAAGGAGTGA

Upstream 100 bases:

>100_bases
TTTTTATGAAAATAATTTTTAAAAATTATTGACAAGAAGCATTTCTTAGTTTAGTGTTTAACCGTAAGGTTAATTAACTT
TTTGATTAAATGAAAGGGGT

Downstream 100 bases:

>100_bases
TTTAGAAATGAAGAAATCAATTTTTATTTTAGATATATGTATATTTGGGTTATCTATCACAGCACTTCTGATCGCCTTTT
TCAAAAATTTAAGCAATGTT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSVGSVFKAISDPTRREILKLLNEKDLSAGEIAEHFDISKPALTKHLNILREAELVSSEKQGNFVIYSINVTVLQQALSG
FMSIFGKKE

Sequences:

>Translated_89_residues
MSVGSVFKAISDPTRREILKLLNEKDLSAGEIAEHFDISKPALTKHLNILREAELVSSEKQGNFVIYSINVTVLQQALSG
FMSIFGKKE
>Mature_88_residues
SVGSVFKAISDPTRREILKLLNEKDLSAGEIAEHFDISKPALTKHLNILREAELVSSEKQGNFVIYSINVTVLQQALSGF
MSIFGKKE

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 9879; Mature: 9747

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGSVFKAISDPTRREILKLLNEKDLSAGEIAEHFDISKPALTKHLNILREAELVSSEK
CCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
QGNFVIYSINVTVLQQALSGFMSIFGKKE
CCCEEEEECHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVGSVFKAISDPTRREILKLLNEKDLSAGEIAEHFDISKPALTKHLNILREAELVSSEK
CHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
QGNFVIYSINVTVLQQALSGFMSIFGKKE
CCCEEEEECHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]