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The map label for this gene is 238922003

Identifier: 238922003

GI number: 238922003

Start: 196332

End: 196688

Strand: Reverse

Name: 238922003

Synonym: EUBELI_20238

Alternate gene names: NA

Gene position: 196688-196332 (Counterclockwise)

Preceding gene: 238922007

Following gene: 238922002

Centisome position: 31.38

GC content: 35.01

Gene sequence:

>357_bases
ATGGACAAGTACATTTTGAAAGTATGGAGGGGATTACGGAATGAGATTACTTTTATTCTTAGTCCGACAGAGAAATGGGG
AACCAAAACAGAGTATACAAAGCTTAAAAAGTTTTTACATAAAGATGGCTATTTGCGAATTGCACCGGAAGTGTATATGC
GGATAGTGCAAAACCGGAAAGCATCCGAAAAACATTTCAGACGAATAGAAGAATATGCACCTAAAACCGGAACGGTGAGA
CTTTTACGCTTAACAGAGAAGCAATATAATAATATATATTTGGTGACGGGTGAACCGGATTATCAAGAAAAAATAGTTGG
AACAAATAGTCATATTATGCAAAAATATGATTTGTAA

Upstream 100 bases:

>100_bases
AACACAAGGGCAAGAAAATCTGATAACAAGATATAACAGAATGTGGCAATCGGAGAACTGTGACGTATGTGCGAATATAT
TATACTGGAGGATTTATTAT

Downstream 100 bases:

>100_bases
CAGAGCACTTATCTATGTTTAGAAAATAAATAAAACATTGCACTAAATATAGTGGTTGAATGCCCCTCCAAAAATGGTGT
ATCGTTCAACTAGACTAAAT

Product: CRISPR-associated protein Cas2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MDKYILKVWRGLRNEITFILSPTEKWGTKTEYTKLKKFLHKDGYLRIAPEVYMRIVQNRKASEKHFRRIEEYAPKTGTVR
LLRLTEKQYNNIYLVTGEPDYQEKIVGTNSHIMQKYDL

Sequences:

>Translated_118_residues
MDKYILKVWRGLRNEITFILSPTEKWGTKTEYTKLKKFLHKDGYLRIAPEVYMRIVQNRKASEKHFRRIEEYAPKTGTVR
LLRLTEKQYNNIYLVTGEPDYQEKIVGTNSHIMQKYDL
>Mature_118_residues
MDKYILKVWRGLRNEITFILSPTEKWGTKTEYTKLKKFLHKDGYLRIAPEVYMRIVQNRKASEKHFRRIEEYAPKTGTVR
LLRLTEKQYNNIYLVTGEPDYQEKIVGTNSHIMQKYDL

Specific function: Unknown

COG id: COG3512

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14215; Mature: 14215

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYILKVWRGLRNEITFILSPTEKWGTKTEYTKLKKFLHKDGYLRIAPEVYMRIVQNRK
CCHHHHHHHHHHHHCEEEEECCCHHHCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHCCC
ASEKHFRRIEEYAPKTGTVRLLRLTEKQYNNIYLVTGEPDYQEKIVGTNSHIMQKYDL
CHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCEEEEECCCCHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MDKYILKVWRGLRNEITFILSPTEKWGTKTEYTKLKKFLHKDGYLRIAPEVYMRIVQNRK
CCHHHHHHHHHHHHCEEEEECCCHHHCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHCCC
ASEKHFRRIEEYAPKTGTVRLLRLTEKQYNNIYLVTGEPDYQEKIVGTNSHIMQKYDL
CHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCEEEEECCCCHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA