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The map label for this gene is yurY [H]

Identifier: 238921898

GI number: 238921898

Start: 107753

End: 108493

Strand: Reverse

Name: yurY [H]

Synonym: EUBELI_20132

Alternate gene names: 238921898

Gene position: 108493-107753 (Counterclockwise)

Preceding gene: 238921899

Following gene: 238921897

Centisome position: 17.31

GC content: 39.81

Gene sequence:

>741_bases
ATGGCACAGGAAATATTAAATGTGAGCCAGCTTAAGGTTGGTGTTGAAGATAAAGAAATACTTCATGGGGTTGATCTTTC
TCTTAATAAGGGAGAGACTCATGTACTTATGGGACCTAACGGAGCAGGTAAGTCTACTCTTGGTTATGCTCTCATGGGTA
ACCCAAGATATGAGATATTAGGTGGTAAGGTTACATTTAACGGAGAAGATTTACTTTCTAAGAATGTTGCTGAGAGATCA
CAGGCAGGTCTTTTTCTGTCTTTCCAGAATCCTATTGAGGTTCCTGGTATCACACTTGGTAATTTTATAAGAAGTTCTAT
GGAGCAGCGTGGAAAGAAGATGACATACTTCAAGTTCAAGAAGCTCCTTCAGGAGAAGATGGAATTCCTTCAGATGGATC
CATCATATATGGACAGAGACCTTAATGTTGGTTTCTCAGGTGGTGAGAAGAAGAAAGCTGAGATATTACAGCTTCTTATG
CTTGAGCCTTCTCTTGCTATTCTTGATGAGACTGACTCAGGACTTGATGTAGATGCTGTTAAGACAGTATCGCTAGGTGT
TGAAGAATATCAGAAGACTCAGAACGGAGCACTTCTTATTATCACTCACAGCACCCGTATCTTAGAGGCACTTAAGGTGG
ATTATACTCATGTTCTTGTCAATGGTAATGTTGTTGCAACAGGCGACAGTGCTATGATTGATGATATCAATGAGAATGGT
TTCGAAAGATTCATCAAGTAA

Upstream 100 bases:

>100_bases
TTAAACAATAGTAACAATTGTTATTATGAATAACTTTACAACCTTTTCTTTCAATGATATTATGTGTGTTGCTAAAAGAA
TGTACAGCTAAGGAGGCATT

Downstream 100 bases:

>100_bases
TTAAGGCTCGGAGGCTTGTAATGGAAGAAAAGACATTTGTAGATGACATAAACAGAAGTGTTTATGATATTAAGAACGAA
GAGAACGATTCTTATAGAAT

Product: Fe-S cluster assembly ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAQEILNVSQLKVGVEDKEILHGVDLSLNKGETHVLMGPNGAGKSTLGYALMGNPRYEILGGKVTFNGEDLLSKNVAERS
QAGLFLSFQNPIEVPGITLGNFIRSSMEQRGKKMTYFKFKKLLQEKMEFLQMDPSYMDRDLNVGFSGGEKKKAEILQLLM
LEPSLAILDETDSGLDVDAVKTVSLGVEEYQKTQNGALLIITHSTRILEALKVDYTHVLVNGNVVATGDSAMIDDINENG
FERFIK

Sequences:

>Translated_246_residues
MAQEILNVSQLKVGVEDKEILHGVDLSLNKGETHVLMGPNGAGKSTLGYALMGNPRYEILGGKVTFNGEDLLSKNVAERS
QAGLFLSFQNPIEVPGITLGNFIRSSMEQRGKKMTYFKFKKLLQEKMEFLQMDPSYMDRDLNVGFSGGEKKKAEILQLLM
LEPSLAILDETDSGLDVDAVKTVSLGVEEYQKTQNGALLIITHSTRILEALKVDYTHVLVNGNVVATGDSAMIDDINENG
FERFIK
>Mature_245_residues
AQEILNVSQLKVGVEDKEILHGVDLSLNKGETHVLMGPNGAGKSTLGYALMGNPRYEILGGKVTFNGEDLLSKNVAERSQ
AGLFLSFQNPIEVPGITLGNFIRSSMEQRGKKMTYFKFKKLLQEKMEFLQMDPSYMDRDLNVGFSGGEKKKAEILQLLML
EPSLAILDETDSGLDVDAVKTVSLGVEEYQKTQNGALLIITHSTRILEALKVDYTHVLVNGNVVATGDSAMIDDINENGF
ERFIK

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=242, Percent_Identity=43.801652892562, Blast_Score=216, Evalue=8e-58,
Organism=Escherichia coli, GI1789891, Length=221, Percent_Identity=30.316742081448, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787500, Length=228, Percent_Identity=27.1929824561404, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788506, Length=259, Percent_Identity=26.2548262548263, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787758, Length=242, Percent_Identity=25.6198347107438, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082268, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787759, Length=252, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI48994883, Length=256, Percent_Identity=26.171875, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081709, Length=227, Percent_Identity=22.9074889867841, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788897, Length=214, Percent_Identity=29.9065420560748, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787792, Length=219, Percent_Identity=26.4840182648402, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=222, Percent_Identity=31.981981981982, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=221, Percent_Identity=28.0542986425339, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27132; Mature: 27000

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEILNVSQLKVGVEDKEILHGVDLSLNKGETHVLMGPNGAGKSTLGYALMGNPRYEIL
CCHHHHCHHHEEECCCHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCEEEECCCCEEEE
GGKVTFNGEDLLSKNVAERSQAGLFLSFQNPIEVPGITLGNFIRSSMEQRGKKMTYFKFK
CCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
KLLQEKMEFLQMDPSYMDRDLNVGFSGGEKKKAEILQLLMLEPSLAILDETDSGLDVDAV
HHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
KTVSLGVEEYQKTQNGALLIITHSTRILEALKVDYTHVLVNGNVVATGDSAMIDDINENG
HHHHHCHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEEEEECCEEEECCCCEECCCCCHH
FERFIK
HHHHCC
>Mature Secondary Structure 
AQEILNVSQLKVGVEDKEILHGVDLSLNKGETHVLMGPNGAGKSTLGYALMGNPRYEIL
CHHHHCHHHEEECCCHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCEEEECCCCEEEE
GGKVTFNGEDLLSKNVAERSQAGLFLSFQNPIEVPGITLGNFIRSSMEQRGKKMTYFKFK
CCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
KLLQEKMEFLQMDPSYMDRDLNVGFSGGEKKKAEILQLLMLEPSLAILDETDSGLDVDAV
HHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
KTVSLGVEEYQKTQNGALLIITHSTRILEALKVDYTHVLVNGNVVATGDSAMIDDINENG
HHHHHCHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEEEEECCEEEECCCCEECCCCCHH
FERFIK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]