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The map label for this gene is yulF [H]

Identifier: 238921877

GI number: 238921877

Start: 83612

End: 84574

Strand: Reverse

Name: yulF [H]

Synonym: EUBELI_20110

Alternate gene names: 238921877

Gene position: 84574-83612 (Counterclockwise)

Preceding gene: 238921878

Following gene: 238921876

Centisome position: 13.49

GC content: 38.53

Gene sequence:

>963_bases
ATGAAGTGGGGAATTTTGGCTACAGGTAATATTGCAAAAAAATTTGCATCAACCATAAATCAGATGAGTAAAGAAAATGA
ACAGTTAGTAGCAGTTGGTTCACGTAACATTGAAAGTGCAAAAGCCTTTGCTAATGAGCATAATATCCCAAGATATTATG
ATTCGTATGAAGCACTGGTTAAAGATCAGGATGTTGAGGCTGTTTATGTAGCAACACCAAATACTTTGCATTATGAGAAT
TGCAGGTTATGTCTTGAACATGGAAAGCATGTATTGTGCGAAAAGCCGTTTACGATAAATGATAAACAGGCACAGGAACT
GTACAGGCTGGCAAGGGATAGGCATCTTTTTATCATGGAGGGACTCTGGATATGGTTTCTTCCATTGTATGATCGTTTAC
GCAGTATCTTACAGCAAGGAGTAATTGGAGAAATAAAACATATTTCATGTCAGTATGGGTTTGTTGCAACAGGTGCCAGA
AAAGAGCGTAAATTTAACCCTGCACTTGGTGGAGGTGCTTTGTTGGATATAGGAATTTACAATCTGGGATTTCTGCGCAT
TGTTACAGGGGATGAGCCGCAGAATGTAGAAACTCAAAAAGTACATATTAATGAGTATGGAACAGATGATTACAGCTGCC
TCAACATGACATATAATGATGGATGTACTGCAGAATCAGTCCAGACAATTGGGCAGGAATTAAAACGTAATGCCAAAATT
GAGGGAACAAAGGGAAGTATATTTTTACCAGATTTCCAACACGCTGAGACTATGATACTTGAGGTGGAAGGAAAAGAACC
GGAAACAATCGAGTGTCCGGTTGATATAAATGGCTTTGAATATGAAATCAGGGAAGTAAGCAGATGCGTAAAACTTGGAT
ATTGCAGCAGTGATGTATATACAGCTAAAGACAGTATTGCACTTACACGGATGATGTATGATATCCGTATGAGCTGGAGT
TAA

Upstream 100 bases:

>100_bases
CGAAGATGATGATATAAGGTATAATAGATTTGTGTCCTTTAATAATTGTTAAATGAGGATATATTACATATAAATTTATA
GAATCGATGGGAGAGATAAG

Downstream 100 bases:

>100_bases
ATATGTAAGTACTGAAAACATATTTTACGAGGTAGTTGGAAACAGGCAGTTTAGAATGTTTGAGTATGTGATATAGTAGT
ATATAAATGTGAATTAAGCA

Product: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKWGILATGNIAKKFASTINQMSKENEQLVAVGSRNIESAKAFANEHNIPRYYDSYEALVKDQDVEAVYVATPNTLHYEN
CRLCLEHGKHVLCEKPFTINDKQAQELYRLARDRHLFIMEGLWIWFLPLYDRLRSILQQGVIGEIKHISCQYGFVATGAR
KERKFNPALGGGALLDIGIYNLGFLRIVTGDEPQNVETQKVHINEYGTDDYSCLNMTYNDGCTAESVQTIGQELKRNAKI
EGTKGSIFLPDFQHAETMILEVEGKEPETIECPVDINGFEYEIREVSRCVKLGYCSSDVYTAKDSIALTRMMYDIRMSWS

Sequences:

>Translated_320_residues
MKWGILATGNIAKKFASTINQMSKENEQLVAVGSRNIESAKAFANEHNIPRYYDSYEALVKDQDVEAVYVATPNTLHYEN
CRLCLEHGKHVLCEKPFTINDKQAQELYRLARDRHLFIMEGLWIWFLPLYDRLRSILQQGVIGEIKHISCQYGFVATGAR
KERKFNPALGGGALLDIGIYNLGFLRIVTGDEPQNVETQKVHINEYGTDDYSCLNMTYNDGCTAESVQTIGQELKRNAKI
EGTKGSIFLPDFQHAETMILEVEGKEPETIECPVDINGFEYEIREVSRCVKLGYCSSDVYTAKDSIALTRMMYDIRMSWS
>Mature_320_residues
MKWGILATGNIAKKFASTINQMSKENEQLVAVGSRNIESAKAFANEHNIPRYYDSYEALVKDQDVEAVYVATPNTLHYEN
CRLCLEHGKHVLCEKPFTINDKQAQELYRLARDRHLFIMEGLWIWFLPLYDRLRSILQQGVIGEIKHISCQYGFVATGAR
KERKFNPALGGGALLDIGIYNLGFLRIVTGDEPQNVETQKVHINEYGTDDYSCLNMTYNDGCTAESVQTIGQELKRNAKI
EGTKGSIFLPDFQHAETMILEVEGKEPETIECPVDINGFEYEIREVSRCVKLGYCSSDVYTAKDSIALTRMMYDIRMSWS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=323, Percent_Identity=33.4365325077399, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI9506675, Length=262, Percent_Identity=24.0458015267176, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI145693182, Length=293, Percent_Identity=26.2798634812287, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787574, Length=213, Percent_Identity=28.6384976525822, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24581115, Length=324, Percent_Identity=35.8024691358025, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24581117, Length=323, Percent_Identity=31.2693498452012, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24584727, Length=322, Percent_Identity=29.1925465838509, Blast_Score=141, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36411; Mature: 36411

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWGILATGNIAKKFASTINQMSKENEQLVAVGSRNIESAKAFANEHNIPRYYDSYEALV
CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHH
KDQDVEAVYVATPNTLHYENCRLCLEHGKHVLCEKPFTINDKQAQELYRLARDRHLFIME
CCCCCCEEEEECCCEEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEH
GLWIWFLPLYDRLRSILQQGVIGEIKHISCQYGFVATGARKERKFNPALGGGALLDIGIY
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEEE
NLGFLRIVTGDEPQNVETQKVHINEYGTDDYSCLNMTYNDGCTAESVQTIGQELKRNAKI
CEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCEE
EGTKGSIFLPDFQHAETMILEVEGKEPETIECPVDINGFEYEIREVSRCVKLGYCSSDVY
CCCCCCEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE
TAKDSIALTRMMYDIRMSWS
ECCHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MKWGILATGNIAKKFASTINQMSKENEQLVAVGSRNIESAKAFANEHNIPRYYDSYEALV
CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHH
KDQDVEAVYVATPNTLHYENCRLCLEHGKHVLCEKPFTINDKQAQELYRLARDRHLFIME
CCCCCCEEEEECCCEEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEH
GLWIWFLPLYDRLRSILQQGVIGEIKHISCQYGFVATGARKERKFNPALGGGALLDIGIY
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEEE
NLGFLRIVTGDEPQNVETQKVHINEYGTDDYSCLNMTYNDGCTAESVQTIGQELKRNAKI
CEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCEE
EGTKGSIFLPDFQHAETMILEVEGKEPETIECPVDINGFEYEIREVSRCVKLGYCSSDVY
CCCCCCEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE
TAKDSIALTRMMYDIRMSWS
ECCHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]