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The map label for this gene is ykoG [H]

Identifier: 238921801

GI number: 238921801

Start: 19256

End: 20041

Strand: Reverse

Name: ykoG [H]

Synonym: EUBELI_20034

Alternate gene names: 238921801

Gene position: 20041-19256 (Counterclockwise)

Preceding gene: 238921802

Following gene: 238921800

Centisome position: 3.2

GC content: 40.2

Gene sequence:

>786_bases
GTGATAAAACAATATCGGACAGGAGTAAAAATTATGCCTAATATACTAATTGTAGAGGATGATATAAATATTAATAACCT
TCTTTGTGAGGTACTTAGGAAGGCAGGTTATACATGCGAACAGGCATTTTCAGGAACAGAGGCAAAGCTGCTTCTAGATA
TAAAAGAAAAGGCTTATACGCTTGTACTGCTTGACTTAATGCTGCCTGGTGCAAGTGGTGAAGAGGTTTTAAAAGAGATA
AGAAAACAGGGAAGGCTTCCGGTGATTGTGCTGACTGCAAAGGATAGTATAGATGATAAAATCGGAGTGCTGACAGATGG
AGCAGATGATTATATAACAAAGCCATTTGAGATTAGAGAGGTATTGGCACGTATTCAGGTGCAGCTTCGTCATATAGAGG
CAGAAACAAAAAGTGAAGCAGAGGCAGAAACAGAAGCAGAAACGGAAGTGATAACAAAGGCTGGTATACAGGAAGGACAA
GGTAGCGGAAGGCTTGAGTTCAGGGATATGGTGCTTATACGCTCTACCTTTGAGGTAAGTATCGGTGGCAGGGTGCTTCC
TAAGATTACAAAACAGGAATTTGCAATACTGGAATTGCTGCTTAAAAACCCGAAGCAGGTGTTTAGCAAGGAGGATATAT
TCGAATATGCGTGGGATGAGCCATATATGGGTGAAACAAAGACCCTGGATGTGCATATAAGCAATATCAGGAAGAAAATA
AAAACCGTTACACCTGATGAATATATAGAAACAATATGGGGGATTGGATATCGCCTGCATGAATAA

Upstream 100 bases:

>100_bases
AGCTGATAGGATATTATGAGAAGCATGAATATCGAAATGTAGAAACTATGAAACAATATGATTTATGTTAATATTATGAT
ATAGATTAAACAGGGAATCA

Downstream 100 bases:

>100_bases
TTTACTCTTTTTTTACTATTTATTTGCGATTGATTAGGATTTATTTTTTATGATAAGAGCAGTTAAGAAAAGGAGGAAAA
AGCTTTGAGTGAATTATTAT

Product: two-component system, OmpR family, response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIKQYRTGVKIMPNILIVEDDININNLLCEVLRKAGYTCEQAFSGTEAKLLLDIKEKAYTLVLLDLMLPGASGEEVLKEI
RKQGRLPVIVLTAKDSIDDKIGVLTDGADDYITKPFEIREVLARIQVQLRHIEAETKSEAEAETEAETEVITKAGIQEGQ
GSGRLEFRDMVLIRSTFEVSIGGRVLPKITKQEFAILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKI
KTVTPDEYIETIWGIGYRLHE

Sequences:

>Translated_261_residues
MIKQYRTGVKIMPNILIVEDDININNLLCEVLRKAGYTCEQAFSGTEAKLLLDIKEKAYTLVLLDLMLPGASGEEVLKEI
RKQGRLPVIVLTAKDSIDDKIGVLTDGADDYITKPFEIREVLARIQVQLRHIEAETKSEAEAETEAETEVITKAGIQEGQ
GSGRLEFRDMVLIRSTFEVSIGGRVLPKITKQEFAILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKI
KTVTPDEYIETIWGIGYRLHE
>Mature_261_residues
MIKQYRTGVKIMPNILIVEDDININNLLCEVLRKAGYTCEQAFSGTEAKLLLDIKEKAYTLVLLDLMLPGASGEEVLKEI
RKQGRLPVIVLTAKDSIDDKIGVLTDGADDYITKPFEIREVLARIQVQLRHIEAETKSEAEAETEAETEVITKAGIQEGQ
GSGRLEFRDMVLIRSTFEVSIGGRVLPKITKQEFAILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKI
KTVTPDEYIETIWGIGYRLHE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=247, Percent_Identity=33.1983805668016, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786599, Length=248, Percent_Identity=31.0483870967742, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI87082012, Length=243, Percent_Identity=31.2757201646091, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789402, Length=250, Percent_Identity=32.4, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1789809, Length=251, Percent_Identity=30.6772908366534, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1787375, Length=244, Percent_Identity=31.5573770491803, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1790552, Length=249, Percent_Identity=34.136546184739, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786911, Length=256, Percent_Identity=29.6875, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790860, Length=248, Percent_Identity=27.8225806451613, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1786784, Length=246, Percent_Identity=29.2682926829268, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI2367329, Length=251, Percent_Identity=33.0677290836653, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790863, Length=257, Percent_Identity=31.9066147859922, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790299, Length=141, Percent_Identity=30.4964539007092, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787229, Length=253, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790437, Length=129, Percent_Identity=34.8837209302326, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788550, Length=132, Percent_Identity=32.5757575757576, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 29614; Mature: 29614

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQYRTGVKIMPNILIVEDDININNLLCEVLRKAGYTCEQAFSGTEAKLLLDIKEKAYT
CCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEEHHHHHH
LVLLDLMLPGASGEEVLKEIRKQGRLPVIVLTAKDSIDDKIGVLTDGADDYITKPFEIRE
HHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCHHHCCCCHHHHH
VLARIQVQLRHIEAETKSEAEAETEAETEVITKAGIQEGQGSGRLEFRDMVLIRSTFEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHEEEEEEEEEEE
IGGRVLPKITKQEFAILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKI
ECCEECCHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHH
KTVTPDEYIETIWGIGYRLHE
HCCCHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MIKQYRTGVKIMPNILIVEDDININNLLCEVLRKAGYTCEQAFSGTEAKLLLDIKEKAYT
CCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEEHHHHHH
LVLLDLMLPGASGEEVLKEIRKQGRLPVIVLTAKDSIDDKIGVLTDGADDYITKPFEIRE
HHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCHHHCCCCHHHHH
VLARIQVQLRHIEAETKSEAEAETEAETEVITKAGIQEGQGSGRLEFRDMVLIRSTFEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHEEEEEEEEEEE
IGGRVLPKITKQEFAILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKI
ECCEECCHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHH
KTVTPDEYIETIWGIGYRLHE
HCCCHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]