| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is 238921790
Identifier: 238921790
GI number: 238921790
Start: 11812
End: 13050
Strand: Reverse
Name: 238921790
Synonym: EUBELI_20023
Alternate gene names: NA
Gene position: 13050-11812 (Counterclockwise)
Preceding gene: 238921791
Following gene: 238921789
Centisome position: 2.08
GC content: 33.25
Gene sequence:
>1239_bases ATGTATTATGATAGGATTATAACAATGAAAGAAGAACTAAGTATAGATATCATCGGACTTGCAGGAGCCTGTTCTTATGC TTTGGACTGTATAGAAGCAGAGTTGGTAAATATCAAAAACAAACATGGAAAAAGAGTGGCTTATATAAGTATATGCATGG CTGAATATTGGAAAATTGAAGGTGATGAATTACAAGATTTAGCCATGTGTGCTTTACTGCATGATAATGCTTTGACACAA TATATTTCGGAAGAACTGAAAAAGGATTCCGTCATTAATTGTAAAAAAGATTTATCCGAGAAAAAAACAAATCTTCATTG TATTTATGGTGAAAAAAATATTACTAAAATTCCATTTAAAACAGATGTGTCAAATGTGATTTTGTATCATCATGAACATG CCGATGGAACTGGTCCTTTTCAAAAAAAGTGGAATGAAATTCCATTGTTTGCAAGGATTATTCATCTTGCAGATACCATT GATATTATAGGAAATAACAGTTGGAATTTTATATGTCAGTACCTTTTAAAAAATAGGGACGGATTATTTGATTCAGAATG TGTGAATGCTTTTCTTCATGCATTCACACATTCCGAATCTTTTATGTGTTTAAGTGATGGTTCTTTTGAAACGAAGCTAT GGGAGATTATCCCAAGACAAAAACAGGTTTTTGATTGGAAAACGTGTAAAAATGTCGCAGATTTTTTTGCAATGATTGTA GATTATAAATCTTCTTTTACAAGCAGACATTCTATAGGAGTGGCTGAAAAAGCAGCTTTTTTTGCTCAATATATCGGATA TGATTCTATTAATGTGCAAAAAATGTATCTGGCTGGTGCACTGCATGATATTGGGAAGATGGCAGTAGGCAATGAAATTT TGGAAAAACCGGATAAGCTTACGGATGATGAATTTTCAAAAATGAAGAATCATGCTGGCTATACATACCTTATATTATCA GAGGTTAATGATTTTGAAGAAATACGAGACTGGGCAGCTTTCCATCATGAAAAATTAAATGGAAAAGGCTATCCTTTTGG GAAAACTGCGGATGAATTAAATGAACCGGAACGTATTATGGCATGTATTGATATTTATCAGGCATTAACCGAGGACAGAC CATATAAGAAAGGTTTATCGCACGAAAAAACGTGTGAGATGCTCGATGACATGGCGCAGAAAGGTTTTGTTGATTCTGAT ATTTCCAAGAAAATTAGGGAATGTTTTGGTGGAATCTAA
Upstream 100 bases:
>100_bases AGAAGGTGGTATTGCACCTGGTACAAAGTGGGAGGATATTCCAGAAGATTTTGAATGTCCGTTATGCTCTGTTGGAAAAG ACCAGTTCTCAGAAGCATAA
Downstream 100 bases:
>100_bases CATTAAAAACGAGAAAATATAGGAAATTCATGAGAAATGCATTTGCCTATTATGAATAGTATTGAACAGGTAACAGGTTC ATAAAACAAATAAACTGAAA
Product: putative two-component system response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MYYDRIITMKEELSIDIIGLAGACSYALDCIEAELVNIKNKHGKRVAYISICMAEYWKIEGDELQDLAMCALLHDNALTQ YISEELKKDSVINCKKDLSEKKTNLHCIYGEKNITKIPFKTDVSNVILYHHEHADGTGPFQKKWNEIPLFARIIHLADTI DIIGNNSWNFICQYLLKNRDGLFDSECVNAFLHAFTHSESFMCLSDGSFETKLWEIIPRQKQVFDWKTCKNVADFFAMIV DYKSSFTSRHSIGVAEKAAFFAQYIGYDSINVQKMYLAGALHDIGKMAVGNEILEKPDKLTDDEFSKMKNHAGYTYLILS EVNDFEEIRDWAAFHHEKLNGKGYPFGKTADELNEPERIMACIDIYQALTEDRPYKKGLSHEKTCEMLDDMAQKGFVDSD ISKKIRECFGGI
Sequences:
>Translated_412_residues MYYDRIITMKEELSIDIIGLAGACSYALDCIEAELVNIKNKHGKRVAYISICMAEYWKIEGDELQDLAMCALLHDNALTQ YISEELKKDSVINCKKDLSEKKTNLHCIYGEKNITKIPFKTDVSNVILYHHEHADGTGPFQKKWNEIPLFARIIHLADTI DIIGNNSWNFICQYLLKNRDGLFDSECVNAFLHAFTHSESFMCLSDGSFETKLWEIIPRQKQVFDWKTCKNVADFFAMIV DYKSSFTSRHSIGVAEKAAFFAQYIGYDSINVQKMYLAGALHDIGKMAVGNEILEKPDKLTDDEFSKMKNHAGYTYLILS EVNDFEEIRDWAAFHHEKLNGKGYPFGKTADELNEPERIMACIDIYQALTEDRPYKKGLSHEKTCEMLDDMAQKGFVDSD ISKKIRECFGGI >Mature_412_residues MYYDRIITMKEELSIDIIGLAGACSYALDCIEAELVNIKNKHGKRVAYISICMAEYWKIEGDELQDLAMCALLHDNALTQ YISEELKKDSVINCKKDLSEKKTNLHCIYGEKNITKIPFKTDVSNVILYHHEHADGTGPFQKKWNEIPLFARIIHLADTI DIIGNNSWNFICQYLLKNRDGLFDSECVNAFLHAFTHSESFMCLSDGSFETKLWEIIPRQKQVFDWKTCKNVADFFAMIV DYKSSFTSRHSIGVAEKAAFFAQYIGYDSINVQKMYLAGALHDIGKMAVGNEILEKPDKLTDDEFSKMKNHAGYTYLILS EVNDFEEIRDWAAFHHEKLNGKGYPFGKTADELNEPERIMACIDIYQALTEDRPYKKGLSHEKTCEMLDDMAQKGFVDSD ISKKIRECFGGI
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47210; Mature: 47210
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYDRIITMKEELSIDIIGLAGACSYALDCIEAELVNIKNKHGKRVAYISICMAEYWKIE CCCCCEEEEHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCC GDELQDLAMCALLHDNALTQYISEELKKDSVINCKKDLSEKKTNLHCIYGEKNITKIPFK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCC TDVSNVILYHHEHADGTGPFQKKWNEIPLFARIIHLADTIDIIGNNSWNFICQYLLKNRD CCCCCEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GLFDSECVNAFLHAFTHSESFMCLSDGSFETKLWEIIPRQKQVFDWKTCKNVADFFAMIV CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DYKSSFTSRHSIGVAEKAAFFAQYIGYDSINVQKMYLAGALHDIGKMAVGNEILEKPDKL HHHHHHCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCC TDDEFSKMKNHAGYTYLILSEVNDFEEIRDWAAFHHEKLNGKGYPFGKTADELNEPERIM CCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHH ACIDIYQALTEDRPYKKGLSHEKTCEMLDDMAQKGFVDSDISKKIRECFGGI HHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MYYDRIITMKEELSIDIIGLAGACSYALDCIEAELVNIKNKHGKRVAYISICMAEYWKIE CCCCCEEEEHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCC GDELQDLAMCALLHDNALTQYISEELKKDSVINCKKDLSEKKTNLHCIYGEKNITKIPFK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCC TDVSNVILYHHEHADGTGPFQKKWNEIPLFARIIHLADTIDIIGNNSWNFICQYLLKNRD CCCCCEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GLFDSECVNAFLHAFTHSESFMCLSDGSFETKLWEIIPRQKQVFDWKTCKNVADFFAMIV CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DYKSSFTSRHSIGVAEKAAFFAQYIGYDSINVQKMYLAGALHDIGKMAVGNEILEKPDKL HHHHHHCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCC TDDEFSKMKNHAGYTYLILSEVNDFEEIRDWAAFHHEKLNGKGYPFGKTADELNEPERIM CCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHH ACIDIYQALTEDRPYKKGLSHEKTCEMLDDMAQKGFVDSDISKKIRECFGGI HHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]