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The map label for this gene is yihI [H]

Identifier: 238921709

GI number: 238921709

Start: 3749628

End: 3750158

Strand: Reverse

Name: yihI [H]

Synonym: NT01EI_3870

Alternate gene names: 238921709

Gene position: 3750158-3749628 (Counterclockwise)

Preceding gene: 238921711

Following gene: 238921708

Centisome position: 98.37

GC content: 58.95

Gene sequence:

>531_bases
ATGAGTCCGGTGAATAAATCAAAGGCCGTTAAAGCCAAAAAAACACGTAAAACCCGTCAGGAGCTGGATCTGGAAGGACG
CGAGCGCAAACGCCAGAAAAAGCACCGCGGCCATAAGCCGGGCGCTCGCAATAGTGACAGTGCGGCTCAGGATGGGAAGG
GAGGTAGCCGCGTAGGACGCGATCCGCGCCTCGGCAGCAAGACGCCGGTTACGTTGGTGGTCGATAGCCAGGCGATAGCG
CTGCGCCGTCCGCAGTCGCCGGTACAGCCAGAGGTGAAGAAGGCGCTCTCCCCGGAAGAGGAGCTGGCGCGTCTGGAAAA
CGATCAGCGTCTGGATGCTCTGCTGGAGCGTCTGGAAGATGGCGCGACGCTGAATGGCGAAGAGCAGCGCTATGTGGACG
AGATGCTGGATCGCATCGATGCGCTGATGGAAGAGCTGGGTATTGAGCTGGAAGATGATGAGGACGACGTGCCGGAACAG
GAAGACATTATGCAGCTGCTGCGCCGCGGTAGCCCAAAAGATGCTATCTGA

Upstream 100 bases:

>100_bases
TAAAATTAAGGCGACAGTTTAGGCTGTCGCCTTTTTTCTTTGCGGCCTTTCTGATAGATTTCGCCGCAGTTTTCGACATC
TCTGATCAAGAGTATAAGTT

Downstream 100 bases:

>100_bases
TGCCGGATGAGCCTGATTCTGGCCATCGGCCTGATGCTCACATGTTATCTGCTGTGGTTATTGGCTAAACTATGGCGGCT
GTCGCAGCGCAAAGCGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSPVNKSKAVKAKKTRKTRQELDLEGRERKRQKKHRGHKPGARNSDSAAQDGKGGSRVGRDPRLGSKTPVTLVVDSQAIA
LRRPQSPVQPEVKKALSPEEELARLENDQRLDALLERLEDGATLNGEEQRYVDEMLDRIDALMEELGIELEDDEDDVPEQ
EDIMQLLRRGSPKDAI

Sequences:

>Translated_176_residues
MSPVNKSKAVKAKKTRKTRQELDLEGRERKRQKKHRGHKPGARNSDSAAQDGKGGSRVGRDPRLGSKTPVTLVVDSQAIA
LRRPQSPVQPEVKKALSPEEELARLENDQRLDALLERLEDGATLNGEEQRYVDEMLDRIDALMEELGIELEDDEDDVPEQ
EDIMQLLRRGSPKDAI
>Mature_175_residues
SPVNKSKAVKAKKTRKTRQELDLEGRERKRQKKHRGHKPGARNSDSAAQDGKGGSRVGRDPRLGSKTPVTLVVDSQAIAL
RRPQSPVQPEVKKALSPEEELARLENDQRLDALLERLEDGATLNGEEQRYVDEMLDRIDALMEELGIELEDDEDDVPEQE
DIMQLLRRGSPKDAI

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=147, Percent_Identity=51.0204081632653, Blast_Score=113, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 19811; Mature: 19679

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVNKSKAVKAKKTRKTRQELDLEGRERKRQKKHRGHKPGARNSDSAAQDGKGGSRVGR
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DPRLGSKTPVTLVVDSQAIALRRPQSPVQPEVKKALSPEEELARLENDQRLDALLERLED
CCCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHC
GATLNGEEQRYVDEMLDRIDALMEELGIELEDDEDDVPEQEDIMQLLRRGSPKDAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SPVNKSKAVKAKKTRKTRQELDLEGRERKRQKKHRGHKPGARNSDSAAQDGKGGSRVGR
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DPRLGSKTPVTLVVDSQAIALRRPQSPVQPEVKKALSPEEELARLENDQRLDALLERLED
CCCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHC
GATLNGEEQRYVDEMLDRIDALMEELGIELEDDEDDVPEQEDIMQLLRRGSPKDAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA