| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yihX [H]
Identifier: 238921699
GI number: 238921699
Start: 3738803
End: 3739390
Strand: Reverse
Name: yihX [H]
Synonym: NT01EI_3860
Alternate gene names: 238921699
Gene position: 3739390-3738803 (Counterclockwise)
Preceding gene: 238921700
Following gene: 238921698
Centisome position: 98.09
GC content: 56.63
Gene sequence:
>588_bases ATGCTGTACATCTTTGATTTAGGTAACGTGATTGTAGACATCGATTTTCACCGTGTGCTGGGGGTCTGGAGCCGGTACAG CGGTGCCCCGCTGGCCACCTTAAGCAAGCGTTTTACGATGGGCGACACCTTTCGTCAGCATGAGCGCGGAGCGATAGACG ATGAAACCTTTGCCCGGCGTCTATGCGATGAGATGGGGATCGCCCTCAGCTTTGCCCAGTTTGAACTGGGCTGGCAGGCG ATTTTTGTTGCGCTGCGCCCGGAGGTTATCGATATCATGCAGCGCCTGCGCCGTCAGGGTGAGCGGGTCGTGGTGCTATC CAACACCAATCGGCTGCATACCCACTTTTGGCCTAAGCATTACCCGGAGATTGCGGCCGCCTGCGATAAAATGTACCTGT CGCAGGAGCTGGGCATGCGTAAGCCCGATGCCGAAATCTATCGTTATGTCCTGGAACAAGAGCGGGTGGTGGCCGGGGAG TCGATATTCTTCGACGATAACGCCGACAATGTAGCGGCGGCGAAGGCATTGGGGATCCAGGCGGTACAGGTGTGTGACCG CCAGGTGATCCCCGCCTATTTTGCATAA
Upstream 100 bases:
>100_bases GCGCGACTTCCTGCTTTTCTTTTGTTCCTTCTATTCGCTGCCGTTTTTTCCGTCTACAGTGGAGTCTCTCACGCCAATAA GCTGAAATCGGGAGCTGCGC
Downstream 100 bases:
>100_bases TGAGACTGGTTTTTCTTTTATCGAGTGTCTGCGCTACCCTGAACACCCAAGTGGGCTCGAACGCCCCCAGTGCGGGGAAA GATGTGATTCGCGATGCAGG
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLYIFDLGNVIVDIDFHRVLGVWSRYSGAPLATLSKRFTMGDTFRQHERGAIDDETFARRLCDEMGIALSFAQFELGWQA IFVALRPEVIDIMQRLRRQGERVVVLSNTNRLHTHFWPKHYPEIAAACDKMYLSQELGMRKPDAEIYRYVLEQERVVAGE SIFFDDNADNVAAAKALGIQAVQVCDRQVIPAYFA
Sequences:
>Translated_195_residues MLYIFDLGNVIVDIDFHRVLGVWSRYSGAPLATLSKRFTMGDTFRQHERGAIDDETFARRLCDEMGIALSFAQFELGWQA IFVALRPEVIDIMQRLRRQGERVVVLSNTNRLHTHFWPKHYPEIAAACDKMYLSQELGMRKPDAEIYRYVLEQERVVAGE SIFFDDNADNVAAAKALGIQAVQVCDRQVIPAYFA >Mature_195_residues MLYIFDLGNVIVDIDFHRVLGVWSRYSGAPLATLSKRFTMGDTFRQHERGAIDDETFARRLCDEMGIALSFAQFELGWQA IFVALRPEVIDIMQRLRRQGERVVVLSNTNRLHTHFWPKHYPEIAAACDKMYLSQELGMRKPDAEIYRYVLEQERVVAGE SIFFDDNADNVAAAKALGIQAVQVCDRQVIPAYFA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=195, Percent_Identity=64.1025641025641, Blast_Score=268, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22363; Mature: 22363
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIFDLGNVIVDIDFHRVLGVWSRYSGAPLATLSKRFTMGDTFRQHERGAIDDETFARR CEEEEECCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH LCDEMGIALSFAQFELGWQAIFVALRPEVIDIMQRLRRQGERVVVLSNTNRLHTHFWPKH HHHHHCHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCC YPEIAAACDKMYLSQELGMRKPDAEIYRYVLEQERVVAGESIFFDDNADNVAAAKALGIQ CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH AVQVCDRQVIPAYFA HHHHHCCCCCCHHCC >Mature Secondary Structure MLYIFDLGNVIVDIDFHRVLGVWSRYSGAPLATLSKRFTMGDTFRQHERGAIDDETFARR CEEEEECCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH LCDEMGIALSFAQFELGWQAIFVALRPEVIDIMQRLRRQGERVVVLSNTNRLHTHFWPKH HHHHHCHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCC YPEIAAACDKMYLSQELGMRKPDAEIYRYVLEQERVVAGESIFFDDNADNVAAAKALGIQ CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH AVQVCDRQVIPAYFA HHHHHCCCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]