| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921693
Identifier: 238921693
GI number: 238921693
Start: 3735201
End: 3735320
Strand: Reverse
Name: 238921693
Synonym: NT01EI_3853
Alternate gene names: NA
Gene position: 3735320-3735201 (Counterclockwise)
Preceding gene: 238921695
Following gene: 238921691
Centisome position: 97.98
GC content: 58.33
Gene sequence:
>120_bases TTGGCGTTTAACGCATCGGGTAAGGCGGCGTTGGTGCCGTCGTTTTGCGCTGGCATCTCTGTAAAACGCGCTCAGCCGGC GCGCCTCCTCCCGGCGTTAATCGGTGAAATTTCACTCTAG
Upstream 100 bases:
>100_bases CACCGTTGCTGCGCTTGCTTTGCAGCAGTAAATCGCGGCTTTCCTGGGGGGCGGTGTGCTCATCGTACTTTTCAAAAGTC AGCATGTTATCTCCCTGAGG
Downstream 100 bases:
>100_bases ATATTTTTGAGTGATTGTTCAATAATTTTTTTGAGCAACCGTTCAAAAAAGTGCGTTACAATGAACTGCATTGAACTCTC CAGCAGGCTTGTAGCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MAFNASGKAALVPSFCAGISVKRAQPARLLPALIGEISL
Sequences:
>Translated_39_residues MAFNASGKAALVPSFCAGISVKRAQPARLLPALIGEISL >Mature_38_residues AFNASGKAALVPSFCAGISVKRAQPARLLPALIGEISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3970; Mature: 3839
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNASGKAALVPSFCAGISVKRAQPARLLPALIGEISL CCCCCCCCEEECCHHHCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AFNASGKAALVPSFCAGISVKRAQPARLLPALIGEISL CCCCCCCEEECCHHHCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA