| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is menA [H]
Identifier: 238921642
GI number: 238921642
Start: 3676727
End: 3677644
Strand: Reverse
Name: menA [H]
Synonym: NT01EI_3797
Alternate gene names: 238921642
Gene position: 3677644-3676727 (Counterclockwise)
Preceding gene: 238921643
Following gene: 238921641
Centisome position: 96.47
GC content: 59.15
Gene sequence:
>918_bases ATGACTTCATTAACCCCGATCAGCCGGCCTCGAGCCTGGCTGGAAAGCCTGCGTCTGCGTACGCTGCCGCTGGCGCTGGC ATCGATAGTGACCGGATCGGCCATCGCCGCTTGGCAGCAAACCTTTAATCTCGGCATCGCTCTGCTCGCGCTGCTGACGG CGGCGCTGTTGCAGATCCTCTCCAATCTGGCCAACGACTACGGCGACGCCGTCAAGGGCAGTGATACCCCGGAGCGCATT GGGCCGCTGCGCGGTATGCAAAAAGGTGTGATCACCCAGGCTCAGATGAAGCGGGCCTTGATCATCACCGTGCTGCTGAC CATCGCCTCCGGCGTCGCGCTGATCGCCGTCGCCTGCCAAAAACCCCAGGATATCATTGGATTCTTGTTACTCGGCCTGA TGGCTATCATCGCCGCCATCACTTACACCGTCGGTACCCGGCCCTATGGCTATATCGGCCTAGGCGATATCTCGGTGCTG ATCTTTTTTGGCTGGCTGAGCGTTGCCGGTACCTACTACCTGCAGGCGGGCACCTTTAACCGCGTGGTGATGCTACCGGC AACGGCCTGCGGTCTGTTGGCCGCGGCGGTACTGAATATCAATAACCTGCGGGATATCGAAAACGATGCCCGCAACGGTA AAAACACCCTGGCTGTACGCCTGGGGCCACACATCGCCCGCTACTACCACGTAGCCCTGCTGGGCGGCGCGGTACTGTGT CTGGCACTGTTTGCCCTGTTAGATCTGCATAGTCTGGTGGGCTGGCTATTTGTGCTGGCTGTTCCCATGCTGTACCGCCA TGCCAGCTATGTCCTGCACCAACGCTCGCCGGAGGCCATGCGGCCCATGTTGGAAAATATGGTGAAAAGCGCCCTATTGA CCAATCTGCTCTTTGCCATCGGTACCGTACTGAGTTAA
Upstream 100 bases:
>100_bases ACAGCTAACGGTTTGTTAAGATAAACACATGAGATAACCCGGCAACGGGCCGTTCAGCGCATTGCTGAGGGTCGCATGCC CTAGTGACTGAAACCATATA
Downstream 100 bases:
>100_bases TCCCTTTTGCAGCAGTATCCCCCGCGTTTCACGCGGGGGATACTGCTGCTTTTGCAAACAGCCACATTAAAGGGATATAC TGATACCCCCCTGCGGCAAC
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTSLTPISRPRAWLESLRLRTLPLALASIVTGSAIAAWQQTFNLGIALLALLTAALLQILSNLANDYGDAVKGSDTPERI GPLRGMQKGVITQAQMKRALIITVLLTIASGVALIAVACQKPQDIIGFLLLGLMAIIAAITYTVGTRPYGYIGLGDISVL IFFGWLSVAGTYYLQAGTFNRVVMLPATACGLLAAAVLNINNLRDIENDARNGKNTLAVRLGPHIARYYHVALLGGAVLC LALFALLDLHSLVGWLFVLAVPMLYRHASYVLHQRSPEAMRPMLENMVKSALLTNLLFAIGTVLS
Sequences:
>Translated_305_residues MTSLTPISRPRAWLESLRLRTLPLALASIVTGSAIAAWQQTFNLGIALLALLTAALLQILSNLANDYGDAVKGSDTPERI GPLRGMQKGVITQAQMKRALIITVLLTIASGVALIAVACQKPQDIIGFLLLGLMAIIAAITYTVGTRPYGYIGLGDISVL IFFGWLSVAGTYYLQAGTFNRVVMLPATACGLLAAAVLNINNLRDIENDARNGKNTLAVRLGPHIARYYHVALLGGAVLC LALFALLDLHSLVGWLFVLAVPMLYRHASYVLHQRSPEAMRPMLENMVKSALLTNLLFAIGTVLS >Mature_304_residues TSLTPISRPRAWLESLRLRTLPLALASIVTGSAIAAWQQTFNLGIALLALLTAALLQILSNLANDYGDAVKGSDTPERIG PLRGMQKGVITQAQMKRALIITVLLTIASGVALIAVACQKPQDIIGFLLLGLMAIIAAITYTVGTRPYGYIGLGDISVLI FFGWLSVAGTYYLQAGTFNRVVMLPATACGLLAAAVLNINNLRDIENDARNGKNTLAVRLGPHIARYYHVALLGGAVLCL ALFALLDLHSLVGWLFVLAVPMLYRHASYVLHQRSPEAMRPMLENMVKSALLTNLLFAIGTVLS
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=297, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1790365, Length=299, Percent_Identity=69.5652173913043, Blast_Score=410, Evalue=1e-116, Organism=Drosophila melanogaster, GI17737429, Length=215, Percent_Identity=28.3720930232558, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 32747; Mature: 32615
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLTPISRPRAWLESLRLRTLPLALASIVTGSAIAAWQQTFNLGIALLALLTAALLQIL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNLANDYGDAVKGSDTPERIGPLRGMQKGVITQAQMKRALIITVLLTIASGVALIAVACQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPQDIIGFLLLGLMAIIAAITYTVGTRPYGYIGLGDISVLIFFGWLSVAGTYYLQAGTFN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEECCCCC RVVMLPATACGLLAAAVLNINNLRDIENDARNGKNTLAVRLGPHIARYYHVALLGGAVLC CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHH LALFALLDLHSLVGWLFVLAVPMLYRHASYVLHQRSPEAMRPMLENMVKSALLTNLLFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GTVLS HHHCC >Mature Secondary Structure TSLTPISRPRAWLESLRLRTLPLALASIVTGSAIAAWQQTFNLGIALLALLTAALLQIL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNLANDYGDAVKGSDTPERIGPLRGMQKGVITQAQMKRALIITVLLTIASGVALIAVACQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPQDIIGFLLLGLMAIIAAITYTVGTRPYGYIGLGDISVLIFFGWLSVAGTYYLQAGTFN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEECCCCC RVVMLPATACGLLAAAVLNINNLRDIENDARNGKNTLAVRLGPHIARYYHVALLGGAVLC CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHH LALFALLDLHSLVGWLFVLAVPMLYRHASYVLHQRSPEAMRPMLENMVKSALLTNLLFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GTVLS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]