| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is gor [H]
Identifier: 238921588
GI number: 238921588
Start: 3626966
End: 3628318
Strand: Direct
Name: gor [H]
Synonym: NT01EI_3741
Alternate gene names: 238921588
Gene position: 3626966-3628318 (Clockwise)
Preceding gene: 238921587
Following gene: 238921591
Centisome position: 95.14
GC content: 60.24
Gene sequence:
>1353_bases ATGACTAAACATTATGACTATCTCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAATCGGGCGGCGATGTACGG CCGCAAGTGTGCGCTGATCGAAGCCAAAGCGCTGGGCGGCACCTGCGTCAACGTGGGCTGCGTTCCGAAGAAAGTGATGT GGCACGCCGCGCAGATCGCTGAAGCCATCAAACTATATGGCCCGGATTATGGTTTTGACACCACGCTCAACCGTTTCGAC TGGCAGCGCCTGATCGACAGCCGCAGCGCCTATATTGAGCGTATTCATCAGTCCTATCAGCGCGGTCTGGGAAATAACAA AGTCGACGTTATCCAGGGAGTTACCACCTTTATTGACGCCCACACGATCGATGTCAACGGCGAGCGTATCAGCGCCGACC ATATCCTCATCGCCTCCGGGGGACGGCCAGCGCACCCGGATATCCCGGGCGCAGAATATGGCATCGACTCCGACGGATTC TTTGCCCTTGACGCGCTGCCACAGCGCGTCGCCATCGTCGGCGCCGGTTATATCGCGGTCGAGATCGCCGGGGTGCTCAA CGCGTTGGGCGCAGAAACCCACCTGTTCGTCCGCAGGCATGCGCCGCTACGCAGCTTTGACAGCCTGATCGTCGATACCC TGTTGGAGGTGATGCACAGCGAAGGGCCTCAGCTGCATACCCACAGCGTGCCGCAGTCAGTGGTTAAAAATGCGGACGGC AGCCTGACGCTGATGCTGGAAAACGGCCATAGCCAGACCGTCGATTGTCTGATCTGGGCCATTGGCCGCGATCCGAATAC CGACCGCCTCAATCTGGGGGCTGCCGGGGTCACTACCGACGCCAACGGCTATATTCCGGTTGATGCGTTCCAGAATACCA ACGTTCCCGGCATCTACGCCGTCGGGGACAATACCGGCGCCGTCGAGCTGACGCCGGTCGCTGTCGCCGCCGGGCGCCGC CTCTCTGAGCGTCTGTTCAACAATAAGCCGCAGGAGCACCTGGATTACAGCAATATCCCCACCGTGGTCTTCAGCCACCC GCCGATCGGCACCGTGGGACTGAGCGAAGCGCAGGCGCGTGCGCAGTACGGCGATGAACAGATTAAGGTCTACACCTCCT CATTTACCGCCATGTATAGCGCGGTCACCCAGCACCGTCAGCCGTGTCGCATGAAGCTGGTGTGCCAGGGGGCGGATGAA CGGATCGTCGGGATCCACGGGATCGGCTTCGGTATGGATGAAATGCTGCAGGGCTTCGCCGTGGCGCTGAAGATGGGCGC CACTAAGCGGGACTTTGACAATACCGTGGCCATCCATCCGACGGCCTCTGAAGAGTTTGTTACCATGCGTTAA
Upstream 100 bases:
>100_bases CGGAGCAATCCTGCAATAGCCGCGGTATCTCGCCATCCTGCCTCCGGCAGAGAGGCATTGCGGGGCAAATCCGATTTGTT GATAACGCGAAGACATCCCT
Downstream 100 bases:
>100_bases CCCGATGTCACGCTACGGGCCAGCCCTCGCCGGCCCGTATGGCGTTGGCACGCTTATGCCGGGCGCGACGCCTGACTCTC TGGCAATGTAAATAGGGCAA
Product: glutathione reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MTKHYDYLAIGGGSGGIASINRAAMYGRKCALIEAKALGGTCVNVGCVPKKVMWHAAQIAEAIKLYGPDYGFDTTLNRFD WQRLIDSRSAYIERIHQSYQRGLGNNKVDVIQGVTTFIDAHTIDVNGERISADHILIASGGRPAHPDIPGAEYGIDSDGF FALDALPQRVAIVGAGYIAVEIAGVLNALGAETHLFVRRHAPLRSFDSLIVDTLLEVMHSEGPQLHTHSVPQSVVKNADG SLTLMLENGHSQTVDCLIWAIGRDPNTDRLNLGAAGVTTDANGYIPVDAFQNTNVPGIYAVGDNTGAVELTPVAVAAGRR LSERLFNNKPQEHLDYSNIPTVVFSHPPIGTVGLSEAQARAQYGDEQIKVYTSSFTAMYSAVTQHRQPCRMKLVCQGADE RIVGIHGIGFGMDEMLQGFAVALKMGATKRDFDNTVAIHPTASEEFVTMR
Sequences:
>Translated_450_residues MTKHYDYLAIGGGSGGIASINRAAMYGRKCALIEAKALGGTCVNVGCVPKKVMWHAAQIAEAIKLYGPDYGFDTTLNRFD WQRLIDSRSAYIERIHQSYQRGLGNNKVDVIQGVTTFIDAHTIDVNGERISADHILIASGGRPAHPDIPGAEYGIDSDGF FALDALPQRVAIVGAGYIAVEIAGVLNALGAETHLFVRRHAPLRSFDSLIVDTLLEVMHSEGPQLHTHSVPQSVVKNADG SLTLMLENGHSQTVDCLIWAIGRDPNTDRLNLGAAGVTTDANGYIPVDAFQNTNVPGIYAVGDNTGAVELTPVAVAAGRR LSERLFNNKPQEHLDYSNIPTVVFSHPPIGTVGLSEAQARAQYGDEQIKVYTSSFTAMYSAVTQHRQPCRMKLVCQGADE RIVGIHGIGFGMDEMLQGFAVALKMGATKRDFDNTVAIHPTASEEFVTMR >Mature_449_residues TKHYDYLAIGGGSGGIASINRAAMYGRKCALIEAKALGGTCVNVGCVPKKVMWHAAQIAEAIKLYGPDYGFDTTLNRFDW QRLIDSRSAYIERIHQSYQRGLGNNKVDVIQGVTTFIDAHTIDVNGERISADHILIASGGRPAHPDIPGAEYGIDSDGFF ALDALPQRVAIVGAGYIAVEIAGVLNALGAETHLFVRRHAPLRSFDSLIVDTLLEVMHSEGPQLHTHSVPQSVVKNADGS LTLMLENGHSQTVDCLIWAIGRDPNTDRLNLGAAGVTTDANGYIPVDAFQNTNVPGIYAVGDNTGAVELTPVAVAAGRRL SERLFNNKPQEHLDYSNIPTVVFSHPPIGTVGLSEAQARAQYGDEQIKVYTSSFTAMYSAVTQHRQPCRMKLVCQGADER IVGIHGIGFGMDEMLQGFAVALKMGATKRDFDNTVAIHPTASEEFVTMR
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=459, Percent_Identity=53.3769063180828, Blast_Score=464, Evalue=1e-131, Organism=Homo sapiens, GI22035672, Length=474, Percent_Identity=38.6075949367089, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI33519430, Length=457, Percent_Identity=36.3238512035011, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI33519428, Length=457, Percent_Identity=36.3238512035011, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI33519426, Length=457, Percent_Identity=36.3238512035011, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI148277065, Length=457, Percent_Identity=36.3238512035011, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI148277071, Length=457, Percent_Identity=36.3238512035011, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI291045266, Length=459, Percent_Identity=32.6797385620915, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI291045268, Length=459, Percent_Identity=29.6296296296296, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI91199540, Length=458, Percent_Identity=29.0393013100437, Blast_Score=171, Evalue=1e-42, Organism=Escherichia coli, GI1789915, Length=450, Percent_Identity=80.4444444444444, Blast_Score=753, Evalue=0.0, Organism=Escherichia coli, GI1786307, Length=453, Percent_Identity=29.3598233995585, Blast_Score=161, Evalue=7e-41, Organism=Escherichia coli, GI87082354, Length=454, Percent_Identity=28.4140969162996, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI87081717, Length=453, Percent_Identity=26.4900662251656, Blast_Score=132, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71983419, Length=450, Percent_Identity=55.7777777777778, Blast_Score=463, Evalue=1e-130, Organism=Caenorhabditis elegans, GI71983429, Length=450, Percent_Identity=55.7777777777778, Blast_Score=462, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17557007, Length=472, Percent_Identity=35.8050847457627, Blast_Score=281, Evalue=5e-76, Organism=Caenorhabditis elegans, GI71982272, Length=481, Percent_Identity=33.6798336798337, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI32565766, Length=459, Percent_Identity=28.7581699346405, Blast_Score=171, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6325166, Length=467, Percent_Identity=49.2505353319058, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6321091, Length=471, Percent_Identity=27.6008492569002, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6325240, Length=470, Percent_Identity=25.3191489361702, Blast_Score=117, Evalue=3e-27, Organism=Drosophila melanogaster, GI24640553, Length=469, Percent_Identity=40.0852878464819, Blast_Score=297, Evalue=1e-80, Organism=Drosophila melanogaster, GI24640549, Length=469, Percent_Identity=40.0852878464819, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI24640551, Length=469, Percent_Identity=40.0852878464819, Blast_Score=296, Evalue=3e-80, Organism=Drosophila melanogaster, GI17737741, Length=472, Percent_Identity=37.2881355932203, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI21358499, Length=467, Percent_Identity=29.1220556745182, Blast_Score=169, Evalue=4e-42,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006322 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48559; Mature: 48427
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHYDYLAIGGGSGGIASINRAAMYGRKCALIEAKALGGTCVNVGCVPKKVMWHAAQIA CCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCHHHHHHHHHHH EAIKLYGPDYGFDTTLNRFDWQRLIDSRSAYIERIHQSYQRGLGNNKVDVIQGVTTFIDA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE HTIDVNGERISADHILIASGGRPAHPDIPGAEYGIDSDGFFALDALPQRVAIVGAGYIAV EEEECCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHH EIAGVLNALGAETHLFVRRHAPLRSFDSLIVDTLLEVMHSEGPQLHTHSVPQSVVKNADG HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCC SLTLMLENGHSQTVDCLIWAIGRDPNTDRLNLGAAGVTTDANGYIPVDAFQNTNVPGIYA CEEEEEECCCCCEEEEEEEEECCCCCCCEEECCCCCEEECCCCEEEECCCCCCCCCEEEE VGDNTGAVELTPVAVAAGRRLSERLFNNKPQEHLDYSNIPTVVFSHPPIGTVGLSEAQAR ECCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCCCCHHHHHH AQYGDEQIKVYTSSFTAMYSAVTQHRQPCRMKLVCQGADERIVGIHGIGFGMDEMLQGFA HHCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHH VALKMGATKRDFDNTVAIHPTASEEFVTMR HHHHCCCCCCCCCCEEEEECCCCCCEEEEC >Mature Secondary Structure TKHYDYLAIGGGSGGIASINRAAMYGRKCALIEAKALGGTCVNVGCVPKKVMWHAAQIA CCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCHHHHHHHHHHH EAIKLYGPDYGFDTTLNRFDWQRLIDSRSAYIERIHQSYQRGLGNNKVDVIQGVTTFIDA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE HTIDVNGERISADHILIASGGRPAHPDIPGAEYGIDSDGFFALDALPQRVAIVGAGYIAV EEEECCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHH EIAGVLNALGAETHLFVRRHAPLRSFDSLIVDTLLEVMHSEGPQLHTHSVPQSVVKNADG HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCC SLTLMLENGHSQTVDCLIWAIGRDPNTDRLNLGAAGVTTDANGYIPVDAFQNTNVPGIYA CEEEEEECCCCCEEEEEEEEECCCCCCCEEECCCCCEEECCCCEEEECCCCCCCCCEEEE VGDNTGAVELTPVAVAAGRRLSERLFNNKPQEHLDYSNIPTVVFSHPPIGTVGLSEAQAR ECCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCCCCHHHHHH AQYGDEQIKVYTSSFTAMYSAVTQHRQPCRMKLVCQGADERIVGIHGIGFGMDEMLQGFA HHCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHH VALKMGATKRDFDNTVAIHPTASEEFVTMR HHHHCCCCCCCCCCEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3521741; 8041620; 9278503; 2006135; 8061609 [H]