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The map label for this gene is yhgF [H]

Identifier: 238921495

GI number: 238921495

Start: 3533278

End: 3535617

Strand: Direct

Name: yhgF [H]

Synonym: NT01EI_3647

Alternate gene names: 238921495

Gene position: 3533278-3535617 (Clockwise)

Preceding gene: 238921494

Following gene: 238921497

Centisome position: 92.68

GC content: 63.55

Gene sequence:

>2340_bases
ATGAATGACGCATTAAGCCGTATTATCGCAACAGAACTGCAGGCGCGTACTGAGCAGGTTGACGCCGCCATCCGCCTGCT
GGACGAAGGCAATACCGTGCCGTTTATCGCACGCTACCGCAAAGAGGTCACCGGCGGACTGGACGATACACAGCTGCGTC
AGCTGGAGAGCCGCCTGATTTACCTGCGGGAGCTGGAGGAGCGTCGCACCACCATCCTTAAGTCGATCGCAGAACAGGGT
AAGCTGGATGCGCCGCTGGAAAGCGCCATCCGTACCACTCAAAGCAAAACCGAACTGGAAGATCTCTATCTCCCCTATAA
GCCGAAACGGCGTACCCGGGGACAAATCGCCATCGAGGCCGGGCTGGCGCCGCTGGCCGATACGCTGTGGCAGCAGCCGC
AGCACGATCCGCAGACCCTGGCGCTACAGTATGTCGATGCCGAAAAAGGGGTGGCCGACGCCAAGGCGGCGCTGGACGGC
GCCCGCTATATCCTGATGGAGCGCTTTGCCGAAGACGCCGCGCTGCTGGGCAAAGTGCGCGACTACCTGTGGAAAAATGC
CCATCTGGTCTCGCGGGTCAATGAAGGCAAAGAGGACGAAGGCGCCAAGTTCCGCGACTACTTCGACCACCATGAACCCC
TCGCCGCCGTGCCCTCCCACCGGGCGCTGGCGATGTTCCGTGGACGCAACGAAGGCATTTTACAGCTCTCCCTCAACCCC
GACCCGCAGTGCGACGAGCCGCCGAAAGAGAGCTATGGTGAACAGATTGTCTGCGACCATCTCGGGCTACGATTGACGCA
GGCGCCGGCGGATGCCTGGCGCAAAGCCGTAGTCAGCTGGACCTGGCGCATCAAGGTGCTGCTGCACCTGGAAACCGAGC
TGATGGGCACCCTGCGCGAACGGGCAGAGGATGAGGCCATCAACGTGTTCGCCCGTAATCTGCACGATCTGCTGATGGCG
GCGCCGGCCGGGCTACGCGCGACCATGGGACTGGATCCCGGCCTGCGTACCGGGGTCAAGGTGGCCGTCGTCGACGCCAC
CGGTAAACTGGTTGCCACCGATACCATTTATCCGCATACCGGTCAGGCGGCCAAGGCGGCCGTCAGCGTGGCCACCCTGT
GCCAAAAGCACGGCGTCGAACTGGTCGCTATCGGTAACGGCACGGCGTCGCGCGAGACGGATCGCTTCTATGCCGACGTA
CAGCGTCAGTTCCCGCAGGTGACGGCGCAGAAGGTGATCGTCAGCGAAGCAGGCGCCTCGGTCTACTCCGCTTCCGAGCT
GGCGGCGCAGGAGTTTCCCGGCCTGGATGTTTCCCTGCGCGGCGCCGTCTCTATCGCCCGTCGCCTGCAGGATCCGCTGG
CGGAGCTGGTGAAGATCGATCCCAAATCCATCGGCGTGGGCCAGTACCAGCACGACGTCAGCCAAAGCTTGCTTGCCCGC
AAGCTGGATGCCGTGGTGGAGGACTGCGTCAACGCCGTGGGTGTCGACCTGAACACCGCCTCGGTCGCGCTGCTGACCCG
GGTGGCGGGCTTGAGCCGCCTGATGGCCCAGAACATCGTCAGCTGGCGCGACGCCAACGGCCGTTTTACCAATCGCGAAC
AGCTGCTTAAGGTCAGCCGGCTGGGGCCCAAAGCCTTCGAGCAGTGCGCAGGCTTCCTGCGCATCACCCACGGAGATAAC
CCGCTGGATGCCTCTACGGTGCACCCGGAGGCCTACCCGGTGGTTGAGCGGATCCTGGCGAAAACCGAGCAGAGCCTGGC
GATGCTGATGGGGAACCCCGATGCACTGCGCGGCCTGAGCCCGAAAGCCTTCACCGATGAGCGTTTCGGGGTACCGACCG
TCAGCGATATTCTGCGTGAGCTGGAAAAACCGGGGCGCGACCCGCGTCCGGAATTTAAAACCGCCACGTTTGCCGAAGGG
GTAGAGACCCTGGCCGACCTCAGCGTCGGCATGATCCTGGAGGGAACGGTCACTAACGTTACCAACTTTGGCGCCTTTGT
CGATATCGGCGTACATCAGGACGGTCTGGTGCATATCTCCTCTCTCGCCCATAAGTTTGTTGAAGATCCGCACAAGGTGG
TTAAAGCCGGCGACATCGTTAAGGTGAAAGTCCTCGAAGTCGATCAGGCCCGCCGACGCATTGCCCTGACCATGCGTCTG
GATGAGCAGCCCGGCGAAGGCGGGGGCCGTCGCCCGTCGGCCGATCGCAGCGGTGAACGCACACGGCCAGGGCAACGTCC
GGCGCGCGCGGGCCACGGCCGCGCCGAGCGCCCGGGAAACAGCGGCAACAGCGCCATGGGGGATGCCCTGGCGGCAGCGC
TGGGCAAACACAAGCGCTGA

Upstream 100 bases:

>100_bases
ACGTCACGTCATAGTCCGCCCGCCTGCGCGGGCTGGCATTTTCCTGACTGACTCCGTATAACGGGGACTTGGCTTTTATC
CATCAAGACTATCTAACGCT

Downstream 100 bases:

>100_bases
CGGCGACATCACGCCCCCTATGGGGGCGTGATGCTCATCACATAATGCAAATCTAAATGAGACTCCATCGCAATTTCATA
ATGTCTATATTCGTCTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 779; Mature: 779

Protein sequence:

>779_residues
MNDALSRIIATELQARTEQVDAAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLIYLRELEERRTTILKSIAEQG
KLDAPLESAIRTTQSKTELEDLYLPYKPKRRTRGQIAIEAGLAPLADTLWQQPQHDPQTLALQYVDAEKGVADAKAALDG
ARYILMERFAEDAALLGKVRDYLWKNAHLVSRVNEGKEDEGAKFRDYFDHHEPLAAVPSHRALAMFRGRNEGILQLSLNP
DPQCDEPPKESYGEQIVCDHLGLRLTQAPADAWRKAVVSWTWRIKVLLHLETELMGTLRERAEDEAINVFARNLHDLLMA
APAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAVSVATLCQKHGVELVAIGNGTASRETDRFYADV
QRQFPQVTAQKVIVSEAGASVYSASELAAQEFPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAR
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLSRLMAQNIVSWRDANGRFTNREQLLKVSRLGPKAFEQCAGFLRITHGDN
PLDASTVHPEAYPVVERILAKTEQSLAMLMGNPDALRGLSPKAFTDERFGVPTVSDILRELEKPGRDPRPEFKTATFAEG
VETLADLSVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLAHKFVEDPHKVVKAGDIVKVKVLEVDQARRRIALTMRL
DEQPGEGGGRRPSADRSGERTRPGQRPARAGHGRAERPGNSGNSAMGDALAAALGKHKR

Sequences:

>Translated_779_residues
MNDALSRIIATELQARTEQVDAAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLIYLRELEERRTTILKSIAEQG
KLDAPLESAIRTTQSKTELEDLYLPYKPKRRTRGQIAIEAGLAPLADTLWQQPQHDPQTLALQYVDAEKGVADAKAALDG
ARYILMERFAEDAALLGKVRDYLWKNAHLVSRVNEGKEDEGAKFRDYFDHHEPLAAVPSHRALAMFRGRNEGILQLSLNP
DPQCDEPPKESYGEQIVCDHLGLRLTQAPADAWRKAVVSWTWRIKVLLHLETELMGTLRERAEDEAINVFARNLHDLLMA
APAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAVSVATLCQKHGVELVAIGNGTASRETDRFYADV
QRQFPQVTAQKVIVSEAGASVYSASELAAQEFPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAR
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLSRLMAQNIVSWRDANGRFTNREQLLKVSRLGPKAFEQCAGFLRITHGDN
PLDASTVHPEAYPVVERILAKTEQSLAMLMGNPDALRGLSPKAFTDERFGVPTVSDILRELEKPGRDPRPEFKTATFAEG
VETLADLSVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLAHKFVEDPHKVVKAGDIVKVKVLEVDQARRRIALTMRL
DEQPGEGGGRRPSADRSGERTRPGQRPARAGHGRAERPGNSGNSAMGDALAAALGKHKR
>Mature_779_residues
MNDALSRIIATELQARTEQVDAAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLIYLRELEERRTTILKSIAEQG
KLDAPLESAIRTTQSKTELEDLYLPYKPKRRTRGQIAIEAGLAPLADTLWQQPQHDPQTLALQYVDAEKGVADAKAALDG
ARYILMERFAEDAALLGKVRDYLWKNAHLVSRVNEGKEDEGAKFRDYFDHHEPLAAVPSHRALAMFRGRNEGILQLSLNP
DPQCDEPPKESYGEQIVCDHLGLRLTQAPADAWRKAVVSWTWRIKVLLHLETELMGTLRERAEDEAINVFARNLHDLLMA
APAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAVSVATLCQKHGVELVAIGNGTASRETDRFYADV
QRQFPQVTAQKVIVSEAGASVYSASELAAQEFPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAR
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLSRLMAQNIVSWRDANGRFTNREQLLKVSRLGPKAFEQCAGFLRITHGDN
PLDASTVHPEAYPVVERILAKTEQSLAMLMGNPDALRGLSPKAFTDERFGVPTVSDILRELEKPGRDPRPEFKTATFAEG
VETLADLSVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLAHKFVEDPHKVVKAGDIVKVKVLEVDQARRRIALTMRL
DEQPGEGGGRRPSADRSGERTRPGQRPARAGHGRAERPGNSGNSAMGDALAAALGKHKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=773, Percent_Identity=35.0582147477361, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI27597090, Length=726, Percent_Identity=23.5537190082645, Blast_Score=100, Evalue=4e-21,
Organism=Escherichia coli, GI87082262, Length=778, Percent_Identity=82.5192802056555, Blast_Score=1273, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI145693187, Length=76, Percent_Identity=47.3684210526316, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17511129, Length=712, Percent_Identity=27.6685393258427, Blast_Score=223, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=297, Percent_Identity=28.956228956229, Blast_Score=87, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=26.2008733624454, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI62484314, Length=782, Percent_Identity=31.2020460358056, Blast_Score=350, Evalue=2e-96,
Organism=Drosophila melanogaster, GI24640080, Length=450, Percent_Identity=22.6666666666667, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85244; Mature: 85244

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDALSRIIATELQARTEQVDAAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLRELEERRTTILKSIAEQGKLDAPLESAIRTTQSKTELEDLYLPYKPKRRTRGQIAIEA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
GLAPLADTLWQQPQHDPQTLALQYVDAEKGVADAKAALDGARYILMERFAEDAALLGKVR
CCHHHHHHHHCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLWKNAHLVSRVNEGKEDEGAKFRDYFDHHEPLAAVPSHRALAMFRGRNEGILQLSLNP
HHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHEECCCCCEEEEECCC
DPQCDEPPKESYGEQIVCDHLGLRLTQAPADAWRKAVVSWTWRIKVLLHLETELMGTLRE
CCCCCCCCHHHHCCEEEHHHHCCEEECCHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHH
RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCC
GQAAKAAVSVATLCQKHGVELVAIGNGTASRETDRFYADVQRQFPQVTAQKVIVSEAGAS
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VYSASELAAQEFPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAR
HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLSRLMAQNIVSWRDANGRFTNREQLLKVSR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LGPKAFEQCAGFLRITHGDNPLDASTVHPEAYPVVERILAKTEQSLAMLMGNPDALRGLS
CCHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PKAFTDERFGVPTVSDILRELEKPGRDPRPEFKTATFAEGVETLADLSVGMILEGTVTNV
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECCHHHH
TNFGAFVDIGVHQDGLVHISSLAHKFVEDPHKVVKAGDIVKVKVLEVDQARRRIALTMRL
HHCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCEEEEEEEEHHHHCCEEEEEEEE
DEQPGEGGGRRPSADRSGERTRPGQRPARAGHGRAERPGNSGNSAMGDALAAALGKHKR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDALSRIIATELQARTEQVDAAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLRELEERRTTILKSIAEQGKLDAPLESAIRTTQSKTELEDLYLPYKPKRRTRGQIAIEA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
GLAPLADTLWQQPQHDPQTLALQYVDAEKGVADAKAALDGARYILMERFAEDAALLGKVR
CCHHHHHHHHCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLWKNAHLVSRVNEGKEDEGAKFRDYFDHHEPLAAVPSHRALAMFRGRNEGILQLSLNP
HHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHEECCCCCEEEEECCC
DPQCDEPPKESYGEQIVCDHLGLRLTQAPADAWRKAVVSWTWRIKVLLHLETELMGTLRE
CCCCCCCCHHHHCCEEEHHHHCCEEECCHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHH
RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCC
GQAAKAAVSVATLCQKHGVELVAIGNGTASRETDRFYADVQRQFPQVTAQKVIVSEAGAS
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VYSASELAAQEFPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAR
HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLSRLMAQNIVSWRDANGRFTNREQLLKVSR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LGPKAFEQCAGFLRITHGDNPLDASTVHPEAYPVVERILAKTEQSLAMLMGNPDALRGLS
CCHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PKAFTDERFGVPTVSDILRELEKPGRDPRPEFKTATFAEGVETLADLSVGMILEGTVTNV
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECCHHHH
TNFGAFVDIGVHQDGLVHISSLAHKFVEDPHKVVKAGDIVKVKVLEVDQARRRIALTMRL
HHCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCEEEEEEEEHHHHCCEEEEEEEE
DEQPGEGGGRRPSADRSGERTRPGQRPARAGHGRAERPGNSGNSAMGDALAAALGKHKR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]