| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is aas [H]
Identifier: 238921126
GI number: 238921126
Start: 3143626
End: 3145785
Strand: Reverse
Name: aas [H]
Synonym: NT01EI_3265
Alternate gene names: 238921126
Gene position: 3145785-3143626 (Counterclockwise)
Preceding gene: 238921146
Following gene: 238921125
Centisome position: 82.52
GC content: 63.19
Gene sequence:
>2160_bases ATGCTGTACCGATTCCTCGGCGTGCTGCTGAAAATGTTGTTCCGTATTCGTCTGACCGGCTTCGGTCAGTGTCTCGATCA CCCGAAGCTGTTAATCGTTCCCAACCACGTCTCCTTTTTGGATGGTGTCCTGCTGACGCTGTATCTGCCGGTTCGGCCGG TGTTTGCTGTCTACAGTTCGATAGCCGACAGCTGGCTGATGCGCCTGGTTGGGCGTTTTGTCGATATCGTCGCTCTGGAT CCGCGTAAGCCGATGGCGATCAAACGGTTAATTCGCTTGGTTGAGCAGGGAAGGCCGGTGGTGATCTTTCCTGAGGGACG TATCACCGTGAGCGGATCGCTGATGAAGATCTATGACGGTGCGGCGTTTGTGGCGGCCCGCTCCGGCGCAGCCCTGCTGC CGGTACGCATTGAGGGGGCTGAGTTCAGCCACTTTGGCCGTCTGAAAGGGCTGTTTCCTCTGCGCCTGCTGCCGCCGATC TCCCTTCATCTGCTGCCGGTGACGCATCTGGCGATGCCGCAGGCCGCGCGGGCGCGTGATCGGCGCCTGCTGGCCGGTGA ACGCCTGCGCGACATTATGATGCGTGCCCGTCTGGACGCGCAGCCGATGACCACGCTGTTTGCCGCCTATCTGTCGGCGA TGCGGCGCTATGGGGCAGGCAGCCGTGCGATCGATGACATTAACCTGCGTGAGGACAGCTACCGTGGGCTGCTGAAAAAG AGCCTCGCCGTCAGCCGGATCCTGCAGCGTTTTACCTGCGAGAATGAGCACGTTGGTCTGCTGCTGCCTAACGCCACCGT CACGGCGGCGGCGATCCTGGGGGCGACGCTGCGCAATCGGGTGCCGGCGATGCTGAACTACACCGCCGGCGCTGCCGGGC TGCGCAATGCCCTGCTGGCCGCCGGGATCGATACCGTGGTCACCTCGCGGCAGTTTTTGCAAAAGGCGCGTCTGGAGCCG TTGCCTCAGCTGGTGGACGGCGCACGCTGGGTCTATCTGGAGGATCTGCGGGATACGCTAGGGTGGCGGGATAAGCTCTG GGTGTTGTGGCATCGGGTGTTCCCCCACGGTGCCATGCTTCCGCGCCAGCCTGACGATGCGGCGCTGATCCTGTTTACCT CCGGTTCAGAGGGAGCGCCCAAAGGGGTAGTACACTCTCACCGTAGCCTGTTGGCCAACGTGGAGCAGATCCGCTGCGTA GCGGATTTTACCCCGCGCGATCGCTTTATGTCGGCGCTGCCGCTGTTTCACGCCTTTGGGCTGACGGTGGGGCTGCTGAC GCCGCTGCTGTGCGGCAGCCGGGTCTTTCTGTATCCCAGTCCGCTGCACTACCGCATGGTGCCGGAGATGGTTTATGACC GAAACTGCACCGTGCTGTTTGCCACCTCGACGTTCCTGGGACACTACGCGCGTTTCGCTCATCCCTATGACTTTGCCCGG CTGCGCTATGTGGTTGCCGGCGCAGAGAAGCTGGCGCCGGAGACGGCCCGGCTGTGGTTTGAGAAGTTTGGCATCCGTAT TCTTGAGGGATACGGGGTGACCGAGTGTGCGCCGGTGGTGGCGATCAATGTGCCGATGGCGACCCGCACCGGCAGCGTCG GCTGCATTCTGCCGGGAATGGAGGCGCGGCTGATCCCGGTGGCGGGGATCGCGCAGGGTGGTTGTCTGCAGCTGCGTGGC CCCAATATTATGAAAGGCTACCTGCGGATCGAGGCGCCGGGGGTCCTGGTGCCGCCGCAGGCGGCGAACGTACAGGGTGA GATGGAGGCGGGCTGGTACGATACTGGCGATATTGTGACGCTGGACGCACAAGGCTATTGCACGATTATCGGACGCCTCA AGCGGTTTGCCAAACTGGCAGGGGAAATGGTGTCGCTGGAGCGTGTTGAACAGCTGGCGCGCGCGGCGTCGCCGCAGGGC GAACATGCCGCCAGCGCGCGGAGCGATCGACTCAAGGGAGAGGCGCTGGTGCTGTTTACCACCGATGTCGGGCTGGGGCG GGAGCAGCTGTTGGCGGCGGCCCGCGCCAGCGGTGCCCCTGAGCTGGCGGTGGCACGGGATATTCGCTATCTGAAGGCCC TGCCGCTGTTGGGCAGTGGCAAGGTGGACTTTGTGACGCTGCGCCGTATGGCAGCATCTGAGGATAGCGTGGATGGATGA
Upstream 100 bases:
>100_bases CGGGTCCGGGCGCAGATATTCCCGCCTGTGCAGTTTGCTGCGCTTCTGGCATCGGGTAGTATGCTAGCCGTGCTATCCTG CCGCACATAGGGAGATGTCC
Downstream 100 bases:
>100_bases GACACAGTGCACCGCCGTCGACGGGAGCGGACGGGGAATGCGGGCGGTTTTTGTGGCGCAGTTTTTCTCTGCGTTTGGCG ACAATGCCCTGCTGTTTGTG
Product: bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase
Products: NA
Alternate protein names: 2-acylglycerophosphoethanolamine acyltransferase; 2-acyl-GPE acyltransferase; Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Acyl-[acyl-carrier-protein] synthetase; Acyl-ACP synthetase; Long-chain-fatty-acid--[acyl-carrier-protein] ligase [H]
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MLYRFLGVLLKMLFRIRLTGFGQCLDHPKLLIVPNHVSFLDGVLLTLYLPVRPVFAVYSSIADSWLMRLVGRFVDIVALD PRKPMAIKRLIRLVEQGRPVVIFPEGRITVSGSLMKIYDGAAFVAARSGAALLPVRIEGAEFSHFGRLKGLFPLRLLPPI SLHLLPVTHLAMPQAARARDRRLLAGERLRDIMMRARLDAQPMTTLFAAYLSAMRRYGAGSRAIDDINLREDSYRGLLKK SLAVSRILQRFTCENEHVGLLLPNATVTAAAILGATLRNRVPAMLNYTAGAAGLRNALLAAGIDTVVTSRQFLQKARLEP LPQLVDGARWVYLEDLRDTLGWRDKLWVLWHRVFPHGAMLPRQPDDAALILFTSGSEGAPKGVVHSHRSLLANVEQIRCV ADFTPRDRFMSALPLFHAFGLTVGLLTPLLCGSRVFLYPSPLHYRMVPEMVYDRNCTVLFATSTFLGHYARFAHPYDFAR LRYVVAGAEKLAPETARLWFEKFGIRILEGYGVTECAPVVAINVPMATRTGSVGCILPGMEARLIPVAGIAQGGCLQLRG PNIMKGYLRIEAPGVLVPPQAANVQGEMEAGWYDTGDIVTLDAQGYCTIIGRLKRFAKLAGEMVSLERVEQLARAASPQG EHAASARSDRLKGEALVLFTTDVGLGREQLLAAARASGAPELAVARDIRYLKALPLLGSGKVDFVTLRRMAASEDSVDG
Sequences:
>Translated_719_residues MLYRFLGVLLKMLFRIRLTGFGQCLDHPKLLIVPNHVSFLDGVLLTLYLPVRPVFAVYSSIADSWLMRLVGRFVDIVALD PRKPMAIKRLIRLVEQGRPVVIFPEGRITVSGSLMKIYDGAAFVAARSGAALLPVRIEGAEFSHFGRLKGLFPLRLLPPI SLHLLPVTHLAMPQAARARDRRLLAGERLRDIMMRARLDAQPMTTLFAAYLSAMRRYGAGSRAIDDINLREDSYRGLLKK SLAVSRILQRFTCENEHVGLLLPNATVTAAAILGATLRNRVPAMLNYTAGAAGLRNALLAAGIDTVVTSRQFLQKARLEP LPQLVDGARWVYLEDLRDTLGWRDKLWVLWHRVFPHGAMLPRQPDDAALILFTSGSEGAPKGVVHSHRSLLANVEQIRCV ADFTPRDRFMSALPLFHAFGLTVGLLTPLLCGSRVFLYPSPLHYRMVPEMVYDRNCTVLFATSTFLGHYARFAHPYDFAR LRYVVAGAEKLAPETARLWFEKFGIRILEGYGVTECAPVVAINVPMATRTGSVGCILPGMEARLIPVAGIAQGGCLQLRG PNIMKGYLRIEAPGVLVPPQAANVQGEMEAGWYDTGDIVTLDAQGYCTIIGRLKRFAKLAGEMVSLERVEQLARAASPQG EHAASARSDRLKGEALVLFTTDVGLGREQLLAAARASGAPELAVARDIRYLKALPLLGSGKVDFVTLRRMAASEDSVDG >Mature_719_residues MLYRFLGVLLKMLFRIRLTGFGQCLDHPKLLIVPNHVSFLDGVLLTLYLPVRPVFAVYSSIADSWLMRLVGRFVDIVALD PRKPMAIKRLIRLVEQGRPVVIFPEGRITVSGSLMKIYDGAAFVAARSGAALLPVRIEGAEFSHFGRLKGLFPLRLLPPI SLHLLPVTHLAMPQAARARDRRLLAGERLRDIMMRARLDAQPMTTLFAAYLSAMRRYGAGSRAIDDINLREDSYRGLLKK SLAVSRILQRFTCENEHVGLLLPNATVTAAAILGATLRNRVPAMLNYTAGAAGLRNALLAAGIDTVVTSRQFLQKARLEP LPQLVDGARWVYLEDLRDTLGWRDKLWVLWHRVFPHGAMLPRQPDDAALILFTSGSEGAPKGVVHSHRSLLANVEQIRCV ADFTPRDRFMSALPLFHAFGLTVGLLTPLLCGSRVFLYPSPLHYRMVPEMVYDRNCTVLFATSTFLGHYARFAHPYDFAR LRYVVAGAEKLAPETARLWFEKFGIRILEGYGVTECAPVVAINVPMATRTGSVGCILPGMEARLIPVAGIAQGGCLQLRG PNIMKGYLRIEAPGVLVPPQAANVQGEMEAGWYDTGDIVTLDAQGYCTIIGRLKRFAKLAGEMVSLERVEQLARAASPQG EHAASARSDRLKGEALVLFTTDVGLGREQLLAAARASGAPELAVARDIRYLKALPLLGSGKVDFVTLRRMAASEDSVDG
Specific function: Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the ATP- dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=365, Percent_Identity=26.027397260274, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI187761345, Length=544, Percent_Identity=25.5514705882353, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI187761343, Length=544, Percent_Identity=25.5514705882353, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI57165412, Length=336, Percent_Identity=27.3809523809524, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI57165410, Length=336, Percent_Identity=27.3809523809524, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI42544132, Length=432, Percent_Identity=23.3796296296296, Blast_Score=84, Evalue=6e-16, Organism=Escherichia coli, GI1789201, Length=718, Percent_Identity=64.6239554317549, Blast_Score=956, Evalue=0.0, Organism=Escherichia coli, GI1788107, Length=361, Percent_Identity=29.0858725761773, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI145693145, Length=362, Percent_Identity=28.7292817679558, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1790505, Length=457, Percent_Identity=23.6323851203501, Blast_Score=77, Evalue=5e-15, Organism=Escherichia coli, GI1788595, Length=277, Percent_Identity=29.6028880866426, Blast_Score=70, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17558820, Length=300, Percent_Identity=29, Blast_Score=112, Evalue=8e-25, Organism=Caenorhabditis elegans, GI32563687, Length=297, Percent_Identity=28.2828282828283, Blast_Score=101, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71994694, Length=371, Percent_Identity=26.6846361185984, Blast_Score=100, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994690, Length=371, Percent_Identity=26.6846361185984, Blast_Score=100, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994703, Length=371, Percent_Identity=26.6846361185984, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17560308, Length=375, Percent_Identity=26.1333333333333, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17531443, Length=286, Percent_Identity=26.9230769230769, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71985884, Length=362, Percent_Identity=25.1381215469613, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17559526, Length=398, Percent_Identity=24.3718592964824, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=349, Percent_Identity=24.0687679083095, Blast_Score=94, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6320852, Length=342, Percent_Identity=25.4385964912281, Blast_Score=85, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319264, Length=393, Percent_Identity=26.2086513994911, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI21355181, Length=541, Percent_Identity=23.6598890942699, Blast_Score=109, Evalue=7e-24, Organism=Drosophila melanogaster, GI18859661, Length=304, Percent_Identity=26.9736842105263, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24581924, Length=357, Percent_Identity=24.6498599439776, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI19922652, Length=279, Percent_Identity=27.5985663082437, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF01553 Acyltransferase; PF00501 AMP-binding [H]
EC number: =2.3.1.40; =6.2.1.20 [H]
Molecular weight: Translated: 79081; Mature: 79081
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRFLGVLLKMLFRIRLTGFGQCLDHPKLLIVPNHVSFLDGVLLTLYLPVRPVFAVYSS CHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH IADSWLMRLVGRFVDIVALDPRKPMAIKRLIRLVEQGRPVVIFPEGRITVSGSLMKIYDG HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCCEEEEECC AAFVAARSGAALLPVRIEGAEFSHFGRLKGLFPLRLLPPISLHLLPVTHLAMPQAARARD EEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCEECCCCCCEEEEEHHHHHCCCHHHHHH RRLLAGERLRDIMMRARLDAQPMTTLFAAYLSAMRRYGAGSRAIDDINLREDSYRGLLKK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH SLAVSRILQRFTCENEHVGLLLPNATVTAAAILGATLRNRVPAMLNYTAGAAGLRNALLA HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHH AGIDTVVTSRQFLQKARLEPLPQLVDGARWVYLEDLRDTLGWRDKLWVLWHRVFPHGAML HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCC PRQPDDAALILFTSGSEGAPKGVVHSHRSLLANVEQIRCVADFTPRDRFMSALPLFHAFG CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH LTVGLLTPLLCGSRVFLYPSPLHYRMVPEMVYDRNCTVLFATSTFLGHYARFAHPYDFAR HHHHHHHHHHHCCEEEEECCCCCHHHCHHHHHCCCCEEEEEEHHHHHHHHHHCCCHHHHH LRYVVAGAEKLAPETARLWFEKFGIRILEGYGVTECAPVVAINVPMATRTGSVGCILPGM HHHHHHCHHHHCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCEECCCCCEEEECCC EARLIPVAGIAQGGCLQLRGPNIMKGYLRIEAPGVLVPPQAANVQGEMEAGWYDTGDIVT CCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCEECCCCEEE LDAQGYCTIIGRLKRFAKLAGEMVSLERVEQLARAASPQGEHAASARSDRLKGEALVLFT ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEE TDVGLGREQLLAAARASGAPELAVARDIRYLKALPLLGSGKVDFVTLRRMAASEDSVDG ECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLYRFLGVLLKMLFRIRLTGFGQCLDHPKLLIVPNHVSFLDGVLLTLYLPVRPVFAVYSS CHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH IADSWLMRLVGRFVDIVALDPRKPMAIKRLIRLVEQGRPVVIFPEGRITVSGSLMKIYDG HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCCEEEEECC AAFVAARSGAALLPVRIEGAEFSHFGRLKGLFPLRLLPPISLHLLPVTHLAMPQAARARD EEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCEECCCCCCEEEEEHHHHHCCCHHHHHH RRLLAGERLRDIMMRARLDAQPMTTLFAAYLSAMRRYGAGSRAIDDINLREDSYRGLLKK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH SLAVSRILQRFTCENEHVGLLLPNATVTAAAILGATLRNRVPAMLNYTAGAAGLRNALLA HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHH AGIDTVVTSRQFLQKARLEPLPQLVDGARWVYLEDLRDTLGWRDKLWVLWHRVFPHGAML HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCC PRQPDDAALILFTSGSEGAPKGVVHSHRSLLANVEQIRCVADFTPRDRFMSALPLFHAFG CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH LTVGLLTPLLCGSRVFLYPSPLHYRMVPEMVYDRNCTVLFATSTFLGHYARFAHPYDFAR HHHHHHHHHHHCCEEEEECCCCCHHHCHHHHHCCCCEEEEEEHHHHHHHHHHCCCHHHHH LRYVVAGAEKLAPETARLWFEKFGIRILEGYGVTECAPVVAINVPMATRTGSVGCILPGM HHHHHHCHHHHCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCEECCCCCEEEECCC EARLIPVAGIAQGGCLQLRGPNIMKGYLRIEAPGVLVPPQAANVQGEMEAGWYDTGDIVT CCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCEECCCCEEE LDAQGYCTIIGRLKRFAKLAGEMVSLERVEQLARAASPQGEHAASARSDRLKGEALVLFT ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEE TDVGLGREQLLAAARASGAPELAVARDIRYLKALPLLGSGKVDFVTLRRMAASEDSVDG ECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA