Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 238921048

GI number: 238921048

Start: 3059075

End: 3059410

Strand: Reverse

Name: fdx [H]

Synonym: NT01EI_3178

Alternate gene names: 238921048

Gene position: 3059410-3059075 (Counterclockwise)

Preceding gene: 238921049

Following gene: 238921047

Centisome position: 80.25

GC content: 58.63

Gene sequence:

>336_bases
ATGCCAAAAATCGTATTTCTGCCCAATCAGGAACATTGCCCGGATGGGGCGGTGATCGAGGCCCAGAAAGGCGAGACGAT
CCTGGACGCAGCGCTGCGTAACGGGATTGAAATCGAACATGCCTGCGAGAAGTCCTGCGCCTGTACCACCTGTCACTGCA
TCGTCCGAGAAGGCTTTGACTCCCTTACTGAGAGCAGCGAGCTGGAGGATGACATGCTGGACAAGGCCTGGGGCCTGGAG
CCGGAAAGCCGCCTGAGCTGTCAGGCACGGGTTACTGATGAAGACCTGGTGGTCGAGATCCCGCGCTACACCGTTAACCA
TGCGCGGGAGCACTGA

Upstream 100 bases:

>100_bases
TGCTGGATGCACAAACTCAAGAATTTGCCGCGCGGCGCATGGATAGCTCCATTCGCCGTGCGCTGGCCGGTCACTCTGTG
GATGAGGTTTAAATATAAAC

Downstream 100 bases:

>100_bases
GGTGGGACTAAAATGGCACGATAGCCGCGCCATCGGCGAGGCGCTATATGACGCGCACCCGGATGTCTCTCCACAGAGTG
TGCGCTTTACCGATCTGCAC

Product: ferredoxin, 2Fe-2S type, ISC system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPKIVFLPNQEHCPDGAVIEAQKGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLTESSELEDDMLDKAWGLE
PESRLSCQARVTDEDLVVEIPRYTVNHAREH

Sequences:

>Translated_111_residues
MPKIVFLPNQEHCPDGAVIEAQKGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLTESSELEDDMLDKAWGLE
PESRLSCQARVTDEDLVVEIPRYTVNHAREH
>Mature_110_residues
PKIVFLPNQEHCPDGAVIEAQKGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLTESSELEDDMLDKAWGLEP
ESRLSCQARVTDEDLVVEIPRYTVNHAREH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=91, Percent_Identity=42.8571428571429, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788874, Length=111, Percent_Identity=90.990990990991, Blast_Score=209, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17544202, Length=91, Percent_Identity=43.956043956044, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6325004, Length=109, Percent_Identity=41.2844036697248, Blast_Score=72, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24661503, Length=91, Percent_Identity=42.8571428571429, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12410; Mature: 12279

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVFLPNQEHCPDGAVIEAQKGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFD
CCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHH
SLTESSELEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTVNHAREH
HHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCHHCCCCCCC
>Mature Secondary Structure 
PKIVFLPNQEHCPDGAVIEAQKGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFD
CEEEECCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHH
SLTESSELEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTVNHAREH
HHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]