| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is engA
Identifier: 238921035
GI number: 238921035
Start: 3046514
End: 3047998
Strand: Reverse
Name: engA
Synonym: NT01EI_3165
Alternate gene names: 238921035
Gene position: 3047998-3046514 (Counterclockwise)
Preceding gene: 238921036
Following gene: 238921034
Centisome position: 79.95
GC content: 59.12
Gene sequence:
>1485_bases ATGATACCTGTCGTCGCGCTGGTCGGGCGCCCGAATGTGGGGAAATCCACCTTATTCAACCGGTTGACGCGTACCCGCGA TGCGTTGGTCGCCGACTTCCCCGGATTAACCCGAGATCGCAAGTATGGTCGTGCTGAAGTAAACGGTCACGAGTTTATCA TTATCGATACCGGCGGTATCGACGGCACCGAAAACGGGGTCGAGACCCACATGGCGGAGCAGTCGCTGATGGCGATTGAA GAGGCCGATATCGTGCTGTTTCTGGTCGATGCCCGCGATGGCCTGCTGCCGGCGGACGAGGCCATTGCCCGCCATCTGCG CAGCCGCGATAAGGCGACGTTCCTGGTCGCCAACAAAACCGACGGCATTGACGCCGAGGTGGCCGTCGGGGACTTTTATT CCCTGGGTATGGGGGAGGTTCACCCTATCGCGGCCTCCCATGGGCGCGGTGTGACCCAGCTTATCGAAGATGCGCTGGTC CCGTTTATTCCACAGGAAGCGCCGGCACCGGTGCTGAGCGAGGAAGAAGAGAACGCGGCCTACTGGGCGGAGCTGGAGGC GGAAGCCGACGGCGAGGCACAGGAGGAGGAAGAGGCGTTTGATCCCATCAATCAGCCCATTAAAATTGCGATTGTCGGGC GTCCCAACGTCGGTAAGTCCACGCTGACCAACCGCATCCTGGGCGAAGACCGGGTGGTGGTGTATGACATGCCGGGCACC ACCCGCGACAGTATCTATATTCCGATGGAGCGTGACGAGCGCGAATACGTTCTGATCGACACCGCCGGGGTGCGCAAGCG CGGCAAGGTTACGGATACCGTTGAGAAGTTCTCGGTCATCAAGACGCTGCAGGCGATTGAAGATGCCAACGTGGTGCTGC TGGTGATCGATGCCCGCCAGGGGATCTCCGATCAGGATCTTTCTCTGCTCGGCTTTATCCTCAATAGTGGGCGCTCACTG GTGGTGGTGGTCAATAAGTGGGACGGCCTGAGCCTGGAGGTCAAAGAGCAGGTGAAGGATATGCTGGATCTGCGTCTGGG ATTCGTCGACTTCGCCCGTATCCACTTTATCTCCGCTCTGCACGGCAGCGGTGTGGGCAACCTGTTCGAATCGATTCAGG AAGCCTACGAAAGTGCCACCCGCCGCGTCAGCACCGCGATGCTGACCCGCATTATGACCATGGCGCAGGATGACCATCAG CCGCCGATGGTGCGCGGGCGCCGGGTGAAGCTGAAGTATGCGCACGCCGGGGGCTATAACCCACCGATCGTGGTGATCCA CGGTAACCAGGTGAAGGATCTGCCGGACTCCTACAAGCGCTACCTGATGAACTACTTCCGCCGCTCTTTGAACGTAATGG GGACGCCGATCCGCATTCAGTTTAAAGAAGGGGATAACCCGTTCGCCAATAAGCGCAACACCCTGACGCCAAACCAGATG CGCAAGCGTAAGCGTCTGTTGAGCCACCTGAAAAAGACGAAGTAA
Upstream 100 bases:
>100_bases GGAACGGCTCCTGATGACCTCAGGGGCCGTTTCGTCTTCTGCATATTTTCCCGTCGCCGACGGCGGCGGGGAATGACATT ACGTAATAGAGGCTTCAACA
Downstream 100 bases:
>100_bases TCGTTAATAGCGGGACACATTGGTGTCCCGTTTTTTTTGACCCGGTCCTATGTTAGGCTATTTATCGTACCTGTTCTGGG CGTCCTTGACGCTCATGTTG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGIDGTENGVETHMAEQSLMAIE EADIVLFLVDARDGLLPADEAIARHLRSRDKATFLVANKTDGIDAEVAVGDFYSLGMGEVHPIAASHGRGVTQLIEDALV PFIPQEAPAPVLSEEEENAAYWAELEAEADGEAQEEEEAFDPINQPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMPGT TRDSIYIPMERDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDANVVLLVIDARQGISDQDLSLLGFILNSGRSL VVVVNKWDGLSLEVKEQVKDMLDLRLGFVDFARIHFISALHGSGVGNLFESIQEAYESATRRVSTAMLTRIMTMAQDDHQ PPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFANKRNTLTPNQM RKRKRLLSHLKKTK
Sequences:
>Translated_494_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGIDGTENGVETHMAEQSLMAIE EADIVLFLVDARDGLLPADEAIARHLRSRDKATFLVANKTDGIDAEVAVGDFYSLGMGEVHPIAASHGRGVTQLIEDALV PFIPQEAPAPVLSEEEENAAYWAELEAEADGEAQEEEEAFDPINQPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMPGT TRDSIYIPMERDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDANVVLLVIDARQGISDQDLSLLGFILNSGRSL VVVVNKWDGLSLEVKEQVKDMLDLRLGFVDFARIHFISALHGSGVGNLFESIQEAYESATRRVSTAMLTRIMTMAQDDHQ PPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFANKRNTLTPNQM RKRKRLLSHLKKTK >Mature_494_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGIDGTENGVETHMAEQSLMAIE EADIVLFLVDARDGLLPADEAIARHLRSRDKATFLVANKTDGIDAEVAVGDFYSLGMGEVHPIAASHGRGVTQLIEDALV PFIPQEAPAPVLSEEEENAAYWAELEAEADGEAQEEEEAFDPINQPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMPGT TRDSIYIPMERDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDANVVLLVIDARQGISDQDLSLLGFILNSGRSL VVVVNKWDGLSLEVKEQVKDMLDLRLGFVDFARIHFISALHGSGVGNLFESIQEAYESATRRVSTAMLTRIMTMAQDDHQ PPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFANKRNTLTPNQM RKRKRLLSHLKKTK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=494, Percent_Identity=82.1862348178138, Blast_Score=827, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=95, Percent_Identity=37.8947368421053, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323665, Length=162, Percent_Identity=34.5679012345679, Blast_Score=77, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_EDWI9 (C5BES7)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002934550.1 - GeneID: 7958683 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3165 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 54984; Mature: 54984
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCCC DGTENGVETHMAEQSLMAIEEADIVLFLVDARDGLLPADEAIARHLRSRDKATFLVANKT CCCCCCHHHHHHHHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECC DGIDAEVAVGDFYSLGMGEVHPIAASHGRGVTQLIEDALVPFIPQEAPAPVLSEEEENAA CCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE YWAELEAEADGEAQEEEEAFDPINQPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMPGT EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCC TRDSIYIPMERDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDANVVLLVIDARQ CCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC GISDQDLSLLGFILNSGRSLVVVVNKWDGLSLEVKEQVKDMLDLRLGFVDFARIHFISAL CCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH HGSGVGNLFESIQEAYESATRRVSTAMLTRIMTMAQDDHQPPMVRGRRVKLKYAHAGGYN HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC PPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFANKRNTLTPNQM CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHH RKRKRLLSHLKKTK HHHHHHHHHHHHCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCCC DGTENGVETHMAEQSLMAIEEADIVLFLVDARDGLLPADEAIARHLRSRDKATFLVANKT CCCCCCHHHHHHHHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECC DGIDAEVAVGDFYSLGMGEVHPIAASHGRGVTQLIEDALVPFIPQEAPAPVLSEEEENAA CCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE YWAELEAEADGEAQEEEEAFDPINQPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMPGT EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCC TRDSIYIPMERDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDANVVLLVIDARQ CCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC GISDQDLSLLGFILNSGRSLVVVVNKWDGLSLEVKEQVKDMLDLRLGFVDFARIHFISAL CCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH HGSGVGNLFESIQEAYESATRRVSTAMLTRIMTMAQDDHQPPMVRGRRVKLKYAHAGGYN HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC PPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFANKRNTLTPNQM CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHH RKRKRLLSHLKKTK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA