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The map label for this gene is prcA [H]

Identifier: 238920943

GI number: 238920943

Start: 2964266

End: 2965207

Strand: Reverse

Name: prcA [H]

Synonym: NT01EI_3073

Alternate gene names: 238920943

Gene position: 2965207-2964266 (Counterclockwise)

Preceding gene: 238920944

Following gene: 238920942

Centisome position: 77.78

GC content: 37.05

Gene sequence:

>942_bases
ATGTATCTTAGTGGTTTTAGACATGGTACTGCATTAGCCAGTATTATTGCATCCCCGTTATCATTAACCCTTCCTTTAGG
TGTTGCTCCTGGATGTCGACTTCTTCCAATTCGTTGGGGATTCAATAATGGATTTTCTATAACCCAAGATGGTTTTCAAC
AAATGCTTTTATTTGTGTCAGATAAAATTGATGTGTTTGTTAACTGTTGGTCAAGGTTACCTATTATGAATTTTAATGAA
GAGACTGTAAGTATGATTAGGACTCTTGAGCGAAGTGGTGGGCGCAGGGGAAAAGGTATATTATTTATATGGGCTGCTGG
TAACTCAGGATGTCCAATTGATTACTATTCAGATACATCTGTTGTTTTTGATGGTATAGTAAAAGATGACGGTTTTTTTT
ATGATGGTAGGGCATCAAAATATTTTCATCATAGCCTGGTAAATATTGATAATGTACTGATGGTTTCATCAGTCGACTGT
TATGGGAAAAGATCGCATTATTCATGTTATGGCTCTGGGATATCTATATGCGCACCTTCTAATAATAAACATCGCTTTGG
GGCTAAACTATATTCTGAAAAAGGCTTAACCACACGTTCCGCTGATTTTACTGGTATGACTAATAATTTTAAAGGAACCT
CTGGCTCTGCTGCAATAGTTGGTGGTGTGGCAGGATTGGTCATTAGTGCAAATAAAAATCTCTATGCCACAGATGTTGCA
TCAATAATAAAATCAACAGCGTCAAAGCATCTGAATTTTTCATCTTACCCAACCACAATATTTTCTTGTGGAAAACATAA
AGCAATACGGTTCAGTGATGGTGTTGTATCTGAATATATTCGCGGAGAATTTGATGGGCAAGGATGGAGCCCTTGGTTTG
GATATGGACTGGTAAATTCATGTGATGCGGTGAAATATGCTATAACTAAGAGCCTATCTTAA

Upstream 100 bases:

>100_bases
CTCTGCTGTTGATGCTGATTATAGTAATAAGTTTATCGCCGCAGCTTTTTTTGATGGTAATAAATTAGTAACGGGGACAC
CAAGACGATTATTTAATAAT

Downstream 100 bases:

>100_bases
TAGGACGTTACTCCAAACGATCAGAGGCTTTGCTAAATAAATCGAACTTTTGGCCGCACGGCGGCCCACGTTCGCACCAG
CCGCTATATGTCTGAGAGCG

Product: peptidase S8/S53 subtilisin kexin sedolisin

Products: NA

Alternate protein names: Trypsin [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MYLSGFRHGTALASIIASPLSLTLPLGVAPGCRLLPIRWGFNNGFSITQDGFQQMLLFVSDKIDVFVNCWSRLPIMNFNE
ETVSMIRTLERSGGRRGKGILFIWAAGNSGCPIDYYSDTSVVFDGIVKDDGFFYDGRASKYFHHSLVNIDNVLMVSSVDC
YGKRSHYSCYGSGISICAPSNNKHRFGAKLYSEKGLTTRSADFTGMTNNFKGTSGSAAIVGGVAGLVISANKNLYATDVA
SIIKSTASKHLNFSSYPTTIFSCGKHKAIRFSDGVVSEYIRGEFDGQGWSPWFGYGLVNSCDAVKYAITKSLS

Sequences:

>Translated_313_residues
MYLSGFRHGTALASIIASPLSLTLPLGVAPGCRLLPIRWGFNNGFSITQDGFQQMLLFVSDKIDVFVNCWSRLPIMNFNE
ETVSMIRTLERSGGRRGKGILFIWAAGNSGCPIDYYSDTSVVFDGIVKDDGFFYDGRASKYFHHSLVNIDNVLMVSSVDC
YGKRSHYSCYGSGISICAPSNNKHRFGAKLYSEKGLTTRSADFTGMTNNFKGTSGSAAIVGGVAGLVISANKNLYATDVA
SIIKSTASKHLNFSSYPTTIFSCGKHKAIRFSDGVVSEYIRGEFDGQGWSPWFGYGLVNSCDAVKYAITKSLS
>Mature_313_residues
MYLSGFRHGTALASIIASPLSLTLPLGVAPGCRLLPIRWGFNNGFSITQDGFQQMLLFVSDKIDVFVNCWSRLPIMNFNE
ETVSMIRTLERSGGRRGKGILFIWAAGNSGCPIDYYSDTSVVFDGIVKDDGFFYDGRASKYFHHSLVNIDNVLMVSSVDC
YGKRSHYSCYGSGISICAPSNNKHRFGAKLYSEKGLTTRSADFTGMTNNFKGTSGSAAIVGGVAGLVISANKNLYATDVA
SIIKSTASKHLNFSSYPTTIFSCGKHKAIRFSDGVVSEYIRGEFDGQGWSPWFGYGLVNSCDAVKYAITKSLS

Specific function: Degrades phycobiliproteins in vitro. Has a substrate specificity similar to that of trypsin [H]

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008979
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500
- InterPro:   IPR002884 [H]

Pfam domain/function: PF01483 P_proprotein; PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 34065; Mature: 34065

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSGFRHGTALASIIASPLSLTLPLGVAPGCRLLPIRWGFNNGFSITQDGFQQMLLFVS
CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC
DKIDVFVNCWSRLPIMNFNEETVSMIRTLERSGGRRGKGILFIWAAGNSGCPIDYYSDTS
CCHHEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCC
VVFDGIVKDDGFFYDGRASKYFHHSLVNIDNVLMVSSVDCYGKRSHYSCYGSGISICAPS
EEEEEEECCCCEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCEEEEECC
NNKHRFGAKLYSEKGLTTRSADFTGMTNNFKGTSGSAAIVGGVAGLVISANKNLYATDVA
CCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCEEHHHHH
SIIKSTASKHLNFSSYPTTIFSCGKHKAIRFSDGVVSEYIRGEFDGQGWSPWFGYGLVNS
HHHHHHHHHCCCCCCCCCHHEECCCCCEEEECCCHHHHHHCCCCCCCCCCCHHCCCCCCC
CDAVKYAITKSLS
CHHHHHHHHHCCC
>Mature Secondary Structure
MYLSGFRHGTALASIIASPLSLTLPLGVAPGCRLLPIRWGFNNGFSITQDGFQQMLLFVS
CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC
DKIDVFVNCWSRLPIMNFNEETVSMIRTLERSGGRRGKGILFIWAAGNSGCPIDYYSDTS
CCHHEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCC
VVFDGIVKDDGFFYDGRASKYFHHSLVNIDNVLMVSSVDCYGKRSHYSCYGSGISICAPS
EEEEEEECCCCEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCEEEEECC
NNKHRFGAKLYSEKGLTTRSADFTGMTNNFKGTSGSAAIVGGVAGLVISANKNLYATDVA
CCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCEEHHHHH
SIIKSTASKHLNFSSYPTTIFSCGKHKAIRFSDGVVSEYIRGEFDGQGWSPWFGYGLVNS
HHHHHHHHHCCCCCCCCCHHEECCCCCEEEECCCHHHHHHCCCCCCCCCCCHHCCCCCCC
CDAVKYAITKSLS
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1900347; 8944762 [H]