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The map label for this gene is recO [H]

Identifier: 238920903

GI number: 238920903

Start: 2919671

End: 2920399

Strand: Reverse

Name: recO [H]

Synonym: NT01EI_3030

Alternate gene names: 238920903

Gene position: 2920399-2919671 (Counterclockwise)

Preceding gene: 238920904

Following gene: 238920902

Centisome position: 76.6

GC content: 63.79

Gene sequence:

>729_bases
ATGGACGGCTGGCAACGCGCCTTCGTGCTGCACGCACGGCCCTACAGTGAAACCAGCCTGATGCTGGACACGTTCACCGA
GGGGCATGGCCGGGTACGTCTGCTGGCCAAAGGGGCGCGCAGCCGTCGCTCTTTGCTTAAGGGGGCGCTGCAGCCCTTTA
CGCCGCTGCTGATCCGCTGGGGCGGCCGGGGCGAGGTAAAGACCCTGCGCAGCGCCGAGGCCGTCTCCCTGGCGCTGCCG
CTCAGCGGCATCACTCTCTACAGCGGCCTGTACGTCAACGAACTGCTGGCGCGGGTGCTGGAGCAGGAGACCTGCTACAA
CGCTCTGTTCTTCGATTACCTGCACTGCATTCAACATCTGGCCGCCCACGCGGGCTCACCGGAGCCTGCGCTGCGCCGCT
TTGAGCTGGCGCTTCTGGCTCAGCTGGGCTACGGCGTCGACTTTTTGCACTGTGCGGGCAGTGGTGAACCGGTAGCCGAT
ACAATGACCTACCGTTACCGTGCAGAGAAGGGATTTATTGCCAGCCTGGTGGTGGATCAGCTCAGCTTCACCGGACGCGA
TCTGAAAGCGCTGGCCAGCCGCGAATTCCCCGATGGTGCAACCCTGCGCGCCGCCAAGCGCTTTACCCGCATGGCGTTAA
AGCCCTACCTGGGCGGTAAGCCACTGAAAAGTCGTGAGCTGTTCCGTCAATTTTCCCCGCGTCGCCCGGCTTCGCCGGGT
ATCTCCTGA

Upstream 100 bases:

>100_bases
AGGTGCATCTTGAGCTGTGGGTTAAGGTGAAATCCGGCTGGGCGGACGATGAACGTGCGCTGCGTAGCCTGGGTTACGTC
GACGATCTGTAAACCGTACC

Downstream 100 bases:

>100_bases
CGTCGGCTGTCCCCCTGCTTTCCCCGCCGCTGTCCTGCCCGCGGCGGCGCGCGCGGCGTTACACTGCATCAGGCCAGTCC
GGCGGCGCTTGTCAGCTGCC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDGWQRAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCIQHLAAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGEPVAD
TMTYRYRAEKGFIASLVVDQLSFTGRDLKALASREFPDGATLRAAKRFTRMALKPYLGGKPLKSRELFRQFSPRRPASPG
IS

Sequences:

>Translated_242_residues
MDGWQRAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCIQHLAAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGEPVAD
TMTYRYRAEKGFIASLVVDQLSFTGRDLKALASREFPDGATLRAAKRFTRMALKPYLGGKPLKSRELFRQFSPRRPASPG
IS
>Mature_242_residues
MDGWQRAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCIQHLAAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGEPVAD
TMTYRYRAEKGFIASLVVDQLSFTGRDLKALASREFPDGATLRAAKRFTRMALKPYLGGKPLKSRELFRQFSPRRPASPG
IS

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=235, Percent_Identity=82.5531914893617, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26873; Mature: 26873

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGWQRAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRW
CCCHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEE
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCIQHL
CCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGEPVADTMTYRYRAEKGFIASLVVDQ
HHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHEECCCCHHHHHHHHH
LSFTGRDLKALASREFPDGATLRAAKRFTRMALKPYLGGKPLKSRELFRQFSPRRPASPG
HHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC
IS
CC
>Mature Secondary Structure
MDGWQRAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRW
CCCHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEE
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCIQHL
CCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGEPVADTMTYRYRAEKGFIASLVVDQ
HHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHEECCCCHHHHHHHHH
LSFTGRDLKALASREFPDGATLRAAKRFTRMALKPYLGGKPLKSRELFRQFSPRRPASPG
HHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC
IS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA