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The map label for this gene is ydhF [H]

Identifier: 238920825

GI number: 238920825

Start: 2838396

End: 2839313

Strand: Reverse

Name: ydhF [H]

Synonym: NT01EI_2951

Alternate gene names: 238920825

Gene position: 2839313-2838396 (Counterclockwise)

Preceding gene: 238920828

Following gene: 238920824

Centisome position: 74.48

GC content: 62.31

Gene sequence:

>918_bases
ATGAAACAGGTAACACTGGGTGCCGACGGCCCGCAGGTTTCCGCTATCGCCCTGGGCTGTATGCGCCTGACTGAGCTGGA
CGATCGCCAGGCCGCCAGCCTGATCGATCGCGCGCTGGCACTGGGGATCAGCACGTTCGATCACGCCGATATCTACGGCG
GCGGGGAGTGTGAACACCGCTTTGCCCGCGCGGCCCGTCTGAGCGGCGCGCGGCGTGAGGGGCTCTTTATTCAGTCCAAG
TGCGGCATTGGCCGCGGCTACTATGACTGCTCCTTTCGCCATATTATGGCGTCGGTGGACGGTATCCTGCAGCGCTTGCA
GTGTGACTATCTGGATATGCTGCTGCTGCACCGTCCCGATGCGCTGGTGGAGCCGCAGGAGGTGGCCGAAGCGTTCGATC
GCCTACAGGCGAGCGGCAAGGTCAGGGCCTTTGGGGTATCCAACCATGCACCGCTGCAAATGGCGCTGCTGCAGAAGTTT
CTGGCTCAGCCGCTGCGGGTGAACCAGATGCAGTTTGGCATCGCCCACTGCGGTATGGTGCGCAGCGGGATCAATGTCAA
TGTGCAGAGCGACGCCGCCGTCGATCGCGACGGCGACACGCTGAACTACTGTCGCCTGCATGACATTACCATTCAGGCCT
GGTCACCGTTCCAGTTCGGTATGTTCAGCGGTGTGTTCATGGATCACCCCGACTTTGCGCCGCTGAATCAGACGCTGGAG
ACGATCGCTGCCCGCCACGATGTCAGTAAGACCACGCTGGCGACGGCCTGGATCCTGCGCCACCCGGCGCAGATGCAGGT
GGTGGCCGGCAGCATGAATGCGGAGCGGCTGGCGCAGATTGCTCAGGCGTGCGAGGTTAACTTAAGTCGCGAGGAGTGGT
ATCAGGTTTATCTGGCGGCGGGCAACCCGCTGCCATAA

Upstream 100 bases:

>100_bases
CGACGGCCTGCGGTAAGCCGCTTATGGCATAGTGGTCGCCATGCCAGGGGATAACCTACCGACGTCCGTCGCCGTGGCTT
TAGTACCGGGAGGAGTGAGA

Downstream 100 bases:

>100_bases
GCACATGCCCCACCGCCGTGCGGTAGGTCTGTTCAGGCGTTGATACCGTACGACGACGGGCTGGCGTATAGGATTTTGCC
CGAATTATTGGGTACCTTCC

Product: oxidoreductase YdhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKQVTLGADGPQVSAIALGCMRLTELDDRQAASLIDRALALGISTFDHADIYGGGECEHRFARAARLSGARREGLFIQSK
CGIGRGYYDCSFRHIMASVDGILQRLQCDYLDMLLLHRPDALVEPQEVAEAFDRLQASGKVRAFGVSNHAPLQMALLQKF
LAQPLRVNQMQFGIAHCGMVRSGINVNVQSDAAVDRDGDTLNYCRLHDITIQAWSPFQFGMFSGVFMDHPDFAPLNQTLE
TIAARHDVSKTTLATAWILRHPAQMQVVAGSMNAERLAQIAQACEVNLSREEWYQVYLAAGNPLP

Sequences:

>Translated_305_residues
MKQVTLGADGPQVSAIALGCMRLTELDDRQAASLIDRALALGISTFDHADIYGGGECEHRFARAARLSGARREGLFIQSK
CGIGRGYYDCSFRHIMASVDGILQRLQCDYLDMLLLHRPDALVEPQEVAEAFDRLQASGKVRAFGVSNHAPLQMALLQKF
LAQPLRVNQMQFGIAHCGMVRSGINVNVQSDAAVDRDGDTLNYCRLHDITIQAWSPFQFGMFSGVFMDHPDFAPLNQTLE
TIAARHDVSKTTLATAWILRHPAQMQVVAGSMNAERLAQIAQACEVNLSREEWYQVYLAAGNPLP
>Mature_305_residues
MKQVTLGADGPQVSAIALGCMRLTELDDRQAASLIDRALALGISTFDHADIYGGGECEHRFARAARLSGARREGLFIQSK
CGIGRGYYDCSFRHIMASVDGILQRLQCDYLDMLLLHRPDALVEPQEVAEAFDRLQASGKVRAFGVSNHAPLQMALLQKF
LAQPLRVNQMQFGIAHCGMVRSGINVNVQSDAAVDRDGDTLNYCRLHDITIQAWSPFQFGMFSGVFMDHPDFAPLNQTLE
TIAARHDVSKTTLATAWILRHPAQMQVVAGSMNAERLAQIAQACEVNLSREEWYQVYLAAGNPLP

Specific function: May function as oxidoreductase (Potential) [H]

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436964, Length=321, Percent_Identity=24.6105919003115, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27436966, Length=321, Percent_Identity=24.2990654205607, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI27436962, Length=317, Percent_Identity=24.2902208201893, Blast_Score=79, Evalue=7e-15,
Organism=Escherichia coli, GI48994888, Length=311, Percent_Identity=34.7266881028939, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI87081735, Length=322, Percent_Identity=26.0869565217391, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1788070, Length=334, Percent_Identity=23.6526946107784, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1789375, Length=328, Percent_Identity=24.390243902439, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788081, Length=260, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33635; Mature: 33635

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVTLGADGPQVSAIALGCMRLTELDDRQAASLIDRALALGISTFDHADIYGGGECEHR
CCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
FARAARLSGARREGLFIQSKCGIGRGYYDCSFRHIMASVDGILQRLQCDYLDMLLLHRPD
HHHHHHHCCCHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALVEPQEVAEAFDRLQASGKVRAFGVSNHAPLQMALLQKFLAQPLRVNQMQFGIAHCGMV
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RSGINVNVQSDAAVDRDGDTLNYCRLHDITIQAWSPFQFGMFSGVFMDHPDFAPLNQTLE
HCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHCCEECCCCCCCHHHHHHH
TIAARHDVSKTTLATAWILRHPAQMQVVAGSMNAERLAQIAQACEVNLSREEWYQVYLAA
HHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEEEEC
GNPLP
CCCCC
>Mature Secondary Structure
MKQVTLGADGPQVSAIALGCMRLTELDDRQAASLIDRALALGISTFDHADIYGGGECEHR
CCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
FARAARLSGARREGLFIQSKCGIGRGYYDCSFRHIMASVDGILQRLQCDYLDMLLLHRPD
HHHHHHHCCCHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALVEPQEVAEAFDRLQASGKVRAFGVSNHAPLQMALLQKFLAQPLRVNQMQFGIAHCGMV
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RSGINVNVQSDAAVDRDGDTLNYCRLHDITIQAWSPFQFGMFSGVFMDHPDFAPLNQTLE
HCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHCCEECCCCCCCHHHHHHH
TIAARHDVSKTTLATAWILRHPAQMQVVAGSMNAERLAQIAQACEVNLSREEWYQVYLAA
HHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEEEEC
GNPLP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]