| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ybeZ [H]
Identifier: 238920799
GI number: 238920799
Start: 2814495
End: 2815550
Strand: Direct
Name: ybeZ [H]
Synonym: NT01EI_2925
Alternate gene names: 238920799
Gene position: 2814495-2815550 (Clockwise)
Preceding gene: 238920797
Following gene: 238920800
Centisome position: 73.83
GC content: 59.38
Gene sequence:
>1056_bases TTGAACGTCACAACCGAAGAACTCTTGCTTGAACCCGCTGACAATCAGCGGCTGAACAGTCTGTGCGGCCCGTTTGATGG CAATATCAAACTGCTCGAACGCCGCCTGGGGATCGAAATCAATCACCGTGACAATCACTTTACGCTGGTCGGACGGACGC CCTGTGTGCGCGCCGCCGTGGATATTCTCAAGCACCTGTATGTGGATACCGCACCGGTGCGTGGCCAGACAGGCGATATC GACCCCGAGCAGATCCATCTGGCCCTCAGGGAGAGTAAGGTGCTGGAGCAGGCCGCCGAGCACGTACCGGACTACGGCAA AGCGGTCCACATCAAGACCAAGCGCGGGCTGATCAAGCCGCGCACCCCCAATCAGGCGCAGTACATCGCCAATATTCTCG ACCACGATATCACCTTCGGCATCGGCCCGGCCGGTACCGGCAAGACCTATCTTGCCGTCGCCGCCGCCGTGGATGCCCTG GAGCGTCAGGAGATCCGCCGCATCCTGCTGACGCGTCCGGCGGTAGAGGCCGGTGAGAAACTGGGCTTCCTGCCGGGCGA TCTCAGCCAAAAGGTCGACCCTTACCTGCGTCCGCTGTACGATGCGCTGTTTGAAATGCTCGGCTTCGAGCGGGTAGAGA AGCTGATGGAGCGTAACGTCATCGAAGTGGCGCCGCTGGCCTATATGCGCGGGCGTACCCTGAACGATGCCTTTATCATT CTGGATGAGAGCCAGAACACCACCATCGAACAGATGAAGATGTTCCTCACCCGCATCGGCTTTAACTCTAAAGCGGTTAT CACCGGCGACATTACCCAGATAGATCTGCCGCGCAACCAAAAGTCCGGCCTGCGCCACGCCATTGAGGTCTTGTCAGCTG TAGACGAGATAAGCTTCAACTTCTTCCACAGTGAAGACGTGGTGCGCCATCCGGTGGTCGCCCGCGTGGTGATGGCCTAT GAAGCGTGGGAAGCGGCAGAGCAACAACGTAAAGAGGCCCTGGCCGCCGAGCGCAAGCACGAGGCACAGGCCGCCCAGAC ACAGGAACAACCATGA
Upstream 100 bases:
>100_bases TGTATGATGTGAATAATTGCTGTATACCGCGTGGCCATCGTATGGCCCGTATCCCCGCGCCGTGGGCGGCGCAATCCACA CACTAATCCAGAGGATTGAT
Downstream 100 bases:
>100_bases GCAATATTATTCTCGACCTGCAGCTGGCCTGCGCAGATCTTCAGGGACTGCCTGCTGAAGGCGACTTTCTGCGCTGGCTG GAAGCCGTCCTGCCGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNVTTEELLLEPADNQRLNSLCGPFDGNIKLLERRLGIEINHRDNHFTLVGRTPCVRAAVDILKHLYVDTAPVRGQTGDI DPEQIHLALRESKVLEQAAEHVPDYGKAVHIKTKRGLIKPRTPNQAQYIANILDHDITFGIGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLMERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDITQIDLPRNQKSGLRHAIEVLSAVDEISFNFFHSEDVVRHPVVARVVMAY EAWEAAEQQRKEALAAERKHEAQAAQTQEQP
Sequences:
>Translated_351_residues MNVTTEELLLEPADNQRLNSLCGPFDGNIKLLERRLGIEINHRDNHFTLVGRTPCVRAAVDILKHLYVDTAPVRGQTGDI DPEQIHLALRESKVLEQAAEHVPDYGKAVHIKTKRGLIKPRTPNQAQYIANILDHDITFGIGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLMERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDITQIDLPRNQKSGLRHAIEVLSAVDEISFNFFHSEDVVRHPVVARVVMAY EAWEAAEQQRKEALAAERKHEAQAAQTQEQP >Mature_351_residues MNVTTEELLLEPADNQRLNSLCGPFDGNIKLLERRLGIEINHRDNHFTLVGRTPCVRAAVDILKHLYVDTAPVRGQTGDI DPEQIHLALRESKVLEQAAEHVPDYGKAVHIKTKRGLIKPRTPNQAQYIANILDHDITFGIGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLMERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDITQIDLPRNQKSGLRHAIEVLSAVDEISFNFFHSEDVVRHPVVARVVMAY EAWEAAEQQRKEALAAERKHEAQAAQTQEQP
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=343, Percent_Identity=86.5889212827988, Blast_Score=595, Evalue=1e-171, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=44.1747572815534, Blast_Score=182, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 39424; Mature: 39424
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTTEELLLEPADNQRLNSLCGPFDGNIKLLERRLGIEINHRDNHFTLVGRTPCVRAAV CCCCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCEEEECCCCEEEEEECCHHHHHHH DILKHLYVDTAPVRGQTGDIDPEQIHLALRESKVLEQAAEHVPDYGKAVHIKTKRGLIKP HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC RTPNQAQYIANILDHDITFGIGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK CCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLMERNVIEVAPLAYMRGRTLNDAFII CCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEE LDESQNTTIEQMKMFLTRIGFNSKAVITGDITQIDLPRNQKSGLRHAIEVLSAVDEISFN EECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH FFHSEDVVRHPVVARVVMAYEAWEAAEQQRKEALAAERKHEAQAAQTQEQP EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNVTTEELLLEPADNQRLNSLCGPFDGNIKLLERRLGIEINHRDNHFTLVGRTPCVRAAV CCCCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCEEEECCCCEEEEEECCHHHHHHH DILKHLYVDTAPVRGQTGDIDPEQIHLALRESKVLEQAAEHVPDYGKAVHIKTKRGLIKP HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC RTPNQAQYIANILDHDITFGIGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK CCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLMERNVIEVAPLAYMRGRTLNDAFII CCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEE LDESQNTTIEQMKMFLTRIGFNSKAVITGDITQIDLPRNQKSGLRHAIEVLSAVDEISFN EECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH FFHSEDVVRHPVVARVVMAYEAWEAAEQQRKEALAAERKHEAQAAQTQEQP EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]