Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238920782

Identifier: 238920782

GI number: 238920782

Start: 2790688

End: 2790882

Strand: Reverse

Name: 238920782

Synonym: NT01EI_2901

Alternate gene names: NA

Gene position: 2790882-2790688 (Counterclockwise)

Preceding gene: 238920784

Following gene: 238920781

Centisome position: 73.21

GC content: 53.33

Gene sequence:

>195_bases
TTGGATGTTCCTGTTCGTCGTTTACGCTGTCCGCTCTGTGGCATCATAACCGAAAAAATCGATTGGCTCCCTGCGCGCCA
GCGCTATACCACCGCGTTAGCCACTTGGGTTGAGTCACGGGTTCGTTTGCTTCCCATTAAGCACGTAGCCGGACTGACCG
GGCTGCACTGGCATACTGTAAAAAACATCGGATAG

Upstream 100 bases:

>100_bases
CCCTGCCTGCTGTCGACGCTGTAACCGGAAGGCCTGCGGGATACACGATACCTCTCTGCGCCGTATCAGAGACCGGGAGT
GACGTCACTGGAAGGTCTGG

Downstream 100 bases:

>100_bases
ACATGAATACCGCCTTCGACCTGGAATTCAGGGAGCACTGTCCGCAGGCGCGGGGGGTCTATGACCTGTTCCTCGTGGTG
GCAAAGTTCAGCCGTGAGGT

Product: transposase, family protein

Products: NA

Alternate protein names: Transposase; Transposase Family Protein; ISBma1 Transposase

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MDVPVRRLRCPLCGIITEKIDWLPARQRYTTALATWVESRVRLLPIKHVAGLTGLHWHTVKNIG

Sequences:

>Translated_64_residues
MDVPVRRLRCPLCGIITEKIDWLPARQRYTTALATWVESRVRLLPIKHVAGLTGLHWHTVKNIG
>Mature_64_residues
MDVPVRRLRCPLCGIITEKIDWLPARQRYTTALATWVESRVRLLPIKHVAGLTGLHWHTVKNIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7358; Mature: 7358

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVPVRRLRCPLCGIITEKIDWLPARQRYTTALATWVESRVRLLPIKHVAGLTGLHWHTV
CCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHC
KNIG
CCCC
>Mature Secondary Structure
MDVPVRRLRCPLCGIITEKIDWLPARQRYTTALATWVESRVRLLPIKHVAGLTGLHWHTV
CCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHC
KNIG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA