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The map label for this gene is gatY [H]

Identifier: 238920692

GI number: 238920692

Start: 2695565

End: 2696419

Strand: Reverse

Name: gatY [H]

Synonym: NT01EI_2805

Alternate gene names: 238920692

Gene position: 2696419-2695565 (Counterclockwise)

Preceding gene: 238920693

Following gene: 238920691

Centisome position: 70.73

GC content: 62.81

Gene sequence:

>855_bases
ATGTTTTTGGTTTCTTCCCGGGATATGCTGCTGCAGGCGCAGGCCAAGGGGTACGCGGTACCGGCGTTTAACATTCACAA
CCTGGAGACCATTCAGGTCATTGCCAAGACGGCGGCTGAAATGGGGTCTCCGGTGATCCTGGCCGGTACGCCCGGTACCT
TTAGCTACGCCGGCGTCGCCTATCTGGTGGATATCTGCCGCGAGGCGGCGCGTGAATACCGTATTCCGCTGGCGCTGCAT
CTGGACCACCACGAGTCCTATGAGGATATCTGTGCCAAGGTGGCGGGCGGCGTCCGGTCGGCGATGATCGACGCCTCGCA
TCACGCTTTTGCGGAGAATGTGGCCCTGACCCGTCGGGTGGTGGAGTATTGCCACCGTCTGGACTGCACCGTCGAGGCCG
AGCTGGGCCGTCTGGTCGGTCAGGAGGATGATCTGGTGGTCGACGCGGCACACGGCAGCTATACCGATCCGGCGATGGCG
GCCGAGTTCGCCCGGGCGACCGGCATCGATTCGCTGGCCATCGCTATCGGTACCGCGCACGGCATGTATAAAGAGGCGCC
GCGCCTGGACTTTGACCGACTGGCCCTGATCCGCCGTCAGACCGAGGTTCCGCTGGTGCTGCATGGCGCCTCCGGCATCC
CGGATCGCGACGTAGAGCGCTGCGTGTCGCTGGGGATTTGTAAGGTCAACGTGGCGACGGAGCTGAAGATCGCCTTCTCT
GACGCGGTGAAAGCCTATTTCGCCAGCCATCCCGCGGCGAACGATATGCGTCACTATATGGAACCGGGTAAGGCCGCGAT
GCAGCAGGTGGTGGAGCAGAAAATCCGCATCTGCGGCAGCGCCGGGCAGCTGTAA

Upstream 100 bases:

>100_bases
GTTTCGCTGGTCAGCATCACACTTTTATTATCTTTTGAATGTTTTCTTTATTTTGTTTTAATGATTAAATGAAAACAGAT
GAAGATGCGGAGGTGTGACG

Downstream 100 bases:

>100_bases
GGAGCACTGAGCATGACGAAACGGGTTGCCGTCCTGTTGGCACACGGATTTGAAGAGGGTGAGGCGGTGGTGTTTATCGA
CATCATGCGTCGCCTGGATA

Product: class II aldolase, tagatose bisphosphate family

Products: NA

Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFLVSSRDMLLQAQAKGYAVPAFNIHNLETIQVIAKTAAEMGSPVILAGTPGTFSYAGVAYLVDICREAAREYRIPLALH
LDHHESYEDICAKVAGGVRSAMIDASHHAFAENVALTRRVVEYCHRLDCTVEAELGRLVGQEDDLVVDAAHGSYTDPAMA
AEFARATGIDSLAIAIGTAHGMYKEAPRLDFDRLALIRRQTEVPLVLHGASGIPDRDVERCVSLGICKVNVATELKIAFS
DAVKAYFASHPAANDMRHYMEPGKAAMQQVVEQKIRICGSAGQL

Sequences:

>Translated_284_residues
MFLVSSRDMLLQAQAKGYAVPAFNIHNLETIQVIAKTAAEMGSPVILAGTPGTFSYAGVAYLVDICREAAREYRIPLALH
LDHHESYEDICAKVAGGVRSAMIDASHHAFAENVALTRRVVEYCHRLDCTVEAELGRLVGQEDDLVVDAAHGSYTDPAMA
AEFARATGIDSLAIAIGTAHGMYKEAPRLDFDRLALIRRQTEVPLVLHGASGIPDRDVERCVSLGICKVNVATELKIAFS
DAVKAYFASHPAANDMRHYMEPGKAAMQQVVEQKIRICGSAGQL
>Mature_284_residues
MFLVSSRDMLLQAQAKGYAVPAFNIHNLETIQVIAKTAAEMGSPVILAGTPGTFSYAGVAYLVDICREAAREYRIPLALH
LDHHESYEDICAKVAGGVRSAMIDASHHAFAENVALTRRVVEYCHRLDCTVEAELGRLVGQEDDLVVDAAHGSYTDPAMA
AEFARATGIDSLAIAIGTAHGMYKEAPRLDFDRLALIRRQTEVPLVLHGASGIPDRDVERCVSLGICKVNVATELKIAFS
DAVKAYFASHPAANDMRHYMEPGKAAMQQVVEQKIRICGSAGQL

Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase GatYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase GatY subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082041, Length=283, Percent_Identity=57.5971731448763, Blast_Score=346, Evalue=9e-97,
Organism=Escherichia coli, GI1789526, Length=284, Percent_Identity=58.8028169014084, Blast_Score=345, Evalue=2e-96,
Organism=Escherichia coli, GI1788072, Length=274, Percent_Identity=39.051094890511, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1789293, Length=294, Percent_Identity=26.1904761904762, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000771
- InterPro:   IPR011288 [H]

Pfam domain/function: PF01116 F_bP_aldolase [H]

EC number: =4.1.2.40 [H]

Molecular weight: Translated: 30765; Mature: 30765

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVSSRDMLLQAQAKGYAVPAFNIHNLETIQVIAKTAAEMGSPVILAGTPGTFSYAGVA
CEEECCCCHHEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
YLVDICREAAREYRIPLALHLDHHESYEDICAKVAGGVRSAMIDASHHAFAENVALTRRV
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYCHRLDCTVEAELGRLVGQEDDLVVDAAHGSYTDPAMAAEFARATGIDSLAIAIGTAH
HHHHHHCCCEEEHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
GMYKEAPRLDFDRLALIRRQTEVPLVLHGASGIPDRDVERCVSLGICKVNVATELKIAFS
HHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECHHEEEHHHH
DAVKAYFASHPAANDMRHYMEPGKAAMQQVVEQKIRICGSAGQL
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFLVSSRDMLLQAQAKGYAVPAFNIHNLETIQVIAKTAAEMGSPVILAGTPGTFSYAGVA
CEEECCCCHHEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
YLVDICREAAREYRIPLALHLDHHESYEDICAKVAGGVRSAMIDASHHAFAENVALTRRV
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYCHRLDCTVEAELGRLVGQEDDLVVDAAHGSYTDPAMAAEFARATGIDSLAIAIGTAH
HHHHHHCCCEEEHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
GMYKEAPRLDFDRLALIRRQTEVPLVLHGASGIPDRDVERCVSLGICKVNVATELKIAFS
HHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECHHEEEHHHH
DAVKAYFASHPAANDMRHYMEPGKAAMQQVVEQKIRICGSAGQL
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA