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The map label for this gene is yjiA [H]

Identifier: 238920678

GI number: 238920678

Start: 2683938

End: 2685038

Strand: Direct

Name: yjiA [H]

Synonym: NT01EI_2791

Alternate gene names: 238920678

Gene position: 2683938-2685038 (Clockwise)

Preceding gene: 238920677

Following gene: 238920681

Centisome position: 70.4

GC content: 63.58

Gene sequence:

>1101_bases
ATGCAGAGCCCCGTTTCCGTTACCCTGTTGACCGGCTTCCTCGGCGCCGGCAAAACCACCCTGCTCAACCACTATCTGCG
CAGCGGCCCCGATCGGCGCCTGGCCATCGTGGAGAATGAGTTTGGCGCCGTCAACCTCGACAGCGCCCTGCTGGAGGCCG
ATGCGTCGGTTTCAGTCACCGAGCTCAGCAACGGCTGCCTCTGTTGCAGCGTACGCGGTGAGTTCAGCGCGGCGCTGAGC
GATCTGCTGGCCCAGCGCCGCGCCGGACGGCTCCAGTTTGAGCATATCATCATCGAAAGCACCGGCTTGGCCGATCCCGC
GCCGATCGTGCAGACCTTCTTTGTCGAGCCCGCGCTGCGTGATGCCCTGCGTCTGGACGCGGTGATCGCACTGGCCGACT
GTCAGCACCTGACGCGCCAGCTGGACGAGCATCCCGTCGCCGCCGCCCAGCTGGGATTTGCCGATCGTATCCTGTTGACC
AAGGCCGATAGGGTCGACGATACGCAGCGAGAGGCGGTCATCGCCCGCATCCGGCGTATCAACTCGCGGGCCGGGCTGTA
CCTGGTGGAGCACGGTATCTGTCCGGCGGCCCTGTGGCTGGATCTACACGCCTTCACCCTCAGCGACGATCTCAGCCTCT
CCCGCGGGCTGCATATCGTCACGGCGCACGCCGCGGCAGCACCGCGCTTTCAGCCATTTCGCACCGCAGTAGCCCCCGCC
ACCGCGGTCGATGACGCCATTCAGGCGCATCTGCTGGAGGGGGGAGAGCTGGATCTCCAGCGCATCGGCGCCTTTATGGA
GCGGTGTGTCGAATGCCACGGCAACGATATGCTGCGCTATAAAGGGATACTGGCTATTGCCGAACAACCTTGCCGCCTGG
TGGTTCAGGGTATTCATCGGGTGGTCGGCTTTGACTATGGCTCCCCTTGGTCACCCGGCGAACCGCGCCGTTCTCAGCTG
GTGATCATTGGCCGCCATCTGCCGATAGCAACGCTGCAGGTCGGGTTTAACAACGCCGCCCACAACGACAAATGCGCAAC
AGTGGCAACACCGCTGTCCGCAAAGACAGCCGGAGAGATTCAGGACGATGCCCGATATTAA

Upstream 100 bases:

>100_bases
CGCTACGGCGGCAAAGGCAGCACCCGCTGCTGCTGAGAGGCAGCACGCGGCGCTATTTATCCGCGGAGCGCCGACGCGCC
CCGCCAACCAGGGAGAGAGC

Downstream 100 bases:

>100_bases
AGCGCATGCAGTGCGATTGCAGAGGAAGAAATACTGCACAGGGATATAAATATATTGAATTGAATAATGCCGCCTATGTC
ATTAGGCTCGCGGGAATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQSPVSVTLLTGFLGAGKTTLLNHYLRSGPDRRLAIVENEFGAVNLDSALLEADASVSVTELSNGCLCCSVRGEFSAALS
DLLAQRRAGRLQFEHIIIESTGLADPAPIVQTFFVEPALRDALRLDAVIALADCQHLTRQLDEHPVAAAQLGFADRILLT
KADRVDDTQREAVIARIRRINSRAGLYLVEHGICPAALWLDLHAFTLSDDLSLSRGLHIVTAHAAAAPRFQPFRTAVAPA
TAVDDAIQAHLLEGGELDLQRIGAFMERCVECHGNDMLRYKGILAIAEQPCRLVVQGIHRVVGFDYGSPWSPGEPRRSQL
VIIGRHLPIATLQVGFNNAAHNDKCATVATPLSAKTAGEIQDDARY

Sequences:

>Translated_366_residues
MQSPVSVTLLTGFLGAGKTTLLNHYLRSGPDRRLAIVENEFGAVNLDSALLEADASVSVTELSNGCLCCSVRGEFSAALS
DLLAQRRAGRLQFEHIIIESTGLADPAPIVQTFFVEPALRDALRLDAVIALADCQHLTRQLDEHPVAAAQLGFADRILLT
KADRVDDTQREAVIARIRRINSRAGLYLVEHGICPAALWLDLHAFTLSDDLSLSRGLHIVTAHAAAAPRFQPFRTAVAPA
TAVDDAIQAHLLEGGELDLQRIGAFMERCVECHGNDMLRYKGILAIAEQPCRLVVQGIHRVVGFDYGSPWSPGEPRRSQL
VIIGRHLPIATLQVGFNNAAHNDKCATVATPLSAKTAGEIQDDARY
>Mature_366_residues
MQSPVSVTLLTGFLGAGKTTLLNHYLRSGPDRRLAIVENEFGAVNLDSALLEADASVSVTELSNGCLCCSVRGEFSAALS
DLLAQRRAGRLQFEHIIIESTGLADPAPIVQTFFVEPALRDALRLDAVIALADCQHLTRQLDEHPVAAAQLGFADRILLT
KADRVDDTQREAVIARIRRINSRAGLYLVEHGICPAALWLDLHAFTLSDDLSLSRGLHIVTAHAAAAPRFQPFRTAVAPA
TAVDDAIQAHLLEGGELDLQRIGAFMERCVECHGNDMLRYKGILAIAEQPCRLVVQGIHRVVGFDYGSPWSPGEPRRSQL
VIIGRHLPIATLQVGFNNAAHNDKCATVATPLSAKTAGEIQDDARY

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=359, Percent_Identity=30.08356545961, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI126722884, Length=359, Percent_Identity=29.5264623955432, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI148727351, Length=359, Percent_Identity=29.5264623955432, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI146231952, Length=356, Percent_Identity=29.7752808988764, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI223941776, Length=346, Percent_Identity=28.9017341040462, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI223941779, Length=350, Percent_Identity=28, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI119120938, Length=150, Percent_Identity=36, Blast_Score=99, Evalue=6e-21,
Organism=Escherichia coli, GI87082430, Length=334, Percent_Identity=38.0239520958084, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1788499, Length=191, Percent_Identity=33.5078534031414, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324356, Length=362, Percent_Identity=26.7955801104972, Blast_Score=136, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 39627; Mature: 39627

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPVSVTLLTGFLGAGKTTLLNHYLRSGPDRRLAIVENEFGAVNLDSALLEADASVSVT
CCCCEEEHEEHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCHHHHHCCCCEEEE
ELSNGCLCCSVRGEFSAALSDLLAQRRAGRLQFEHIIIESTGLADPAPIVQTFFVEPALR
ECCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHCHHHH
DALRLDAVIALADCQHLTRQLDEHPVAAAQLGFADRILLTKADRVDDTQREAVIARIRRI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHH
NSRAGLYLVEHGICPAALWLDLHAFTLSDDLSLSRGLHIVTAHAAAAPRFQPFRTAVAPA
CCCCCEEEEECCCCHHHHHHHHEEEEECCCCHHHCCEEEEEECCCCCCCCCHHHHHHCCH
TAVDDAIQAHLLEGGELDLQRIGAFMERCVECHGNDMLRYKGILAIAEQPCRLVVQGIHR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHEEHHHHHHHHHHHHHH
VVGFDYGSPWSPGEPRRSQLVIIGRHLPIATLQVGFNNAAHNDKCATVATPLSAKTAGEI
HHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCC
QDDARY
CCCCCC
>Mature Secondary Structure
MQSPVSVTLLTGFLGAGKTTLLNHYLRSGPDRRLAIVENEFGAVNLDSALLEADASVSVT
CCCCEEEHEEHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCHHHHHCCCCEEEE
ELSNGCLCCSVRGEFSAALSDLLAQRRAGRLQFEHIIIESTGLADPAPIVQTFFVEPALR
ECCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHCHHHH
DALRLDAVIALADCQHLTRQLDEHPVAAAQLGFADRILLTKADRVDDTQREAVIARIRRI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHH
NSRAGLYLVEHGICPAALWLDLHAFTLSDDLSLSRGLHIVTAHAAAAPRFQPFRTAVAPA
CCCCCEEEEECCCCHHHHHHHHEEEEECCCCHHHCCEEEEEECCCCCCCCCHHHHHHCCH
TAVDDAIQAHLLEGGELDLQRIGAFMERCVECHGNDMLRYKGILAIAEQPCRLVVQGIHR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHEEHHHHHHHHHHHHHH
VVGFDYGSPWSPGEPRRSQLVIIGRHLPIATLQVGFNNAAHNDKCATVATPLSAKTAGEI
HHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCC
QDDARY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]