Click here to switch to the map view.

The map label for this gene is yfcZ [H]

Identifier: 238920646

GI number: 238920646

Start: 2656959

End: 2657255

Strand: Reverse

Name: yfcZ [H]

Synonym: NT01EI_2758

Alternate gene names: 238920646

Gene position: 2657255-2656959 (Counterclockwise)

Preceding gene: 238920648

Following gene: 238920645

Centisome position: 69.7

GC content: 51.52

Gene sequence:

>297_bases
ATGACCGATGCAATCAATAAATGCAGCGCGACTGAAACCGCGGCATGCTGTTGTGTAGACGTAGGTACCGTAATGGACAA
TACCGACTGTCCCGCATCTTACCGTCATCTATTTGCCAGTCAGGATGAGGCTCAGACAATGCTGGCTCAGCTGACGGAAA
AGGCGCAGTCCGTTGCGTCAGAGCCGTGTCAGATCACCAGCAGCATTGCGCAGAATGCACAGGGCTTTGAACTGAATATC
GATTTTCTGTTCTGCTGTCAGGCTGAGACGCTGATTTTCCAGCTGGGTTTGCGCTAA

Upstream 100 bases:

>100_bases
AGGCGGGCGGGGTAAAATAAGCATCAATATCCTGTTTTTTGAGCCAGATCACCATTGGCCCGACTATCGGGGCAGTTGCC
CCACTGAGGAGACAAGCGAA

Downstream 100 bases:

>100_bases
GCACGGGGGTAAAAACGCACGGGATACCGTGCGTTTTTTGTAACCTGAGGTTATCCACCGTGTCGGCCGATGGCGTCAGG
TCAGCCGCAGAGGGGGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTDAINKCSATETAACCCVDVGTVMDNTDCPASYRHLFASQDEAQTMLAQLTEKAQSVASEPCQITSSIAQNAQGFELNI
DFLFCCQAETLIFQLGLR

Sequences:

>Translated_98_residues
MTDAINKCSATETAACCCVDVGTVMDNTDCPASYRHLFASQDEAQTMLAQLTEKAQSVASEPCQITSSIAQNAQGFELNI
DFLFCCQAETLIFQLGLR
>Mature_97_residues
TDAINKCSATETAACCCVDVGTVMDNTDCPASYRHLFASQDEAQTMLAQLTEKAQSVASEPCQITSSIAQNAQGFELNID
FLFCCQAETLIFQLGLR

Specific function: Unknown

COG id: COG3691

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0381 family [H]

Homologues:

Organism=Escherichia coli, GI87082087, Length=94, Percent_Identity=60.6382978723404, Blast_Score=124, Evalue=1e-30,
Organism=Escherichia coli, GI1790357, Length=100, Percent_Identity=37, Blast_Score=72, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005272 [H]

Pfam domain/function: PF04175 DUF406 [H]

EC number: NA

Molecular weight: Translated: 10593; Mature: 10462

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAINKCSATETAACCCVDVGTVMDNTDCPASYRHLFASQDEAQTMLAQLTEKAQSVAS
CCCCCCCCCCCCHHHHHHHECCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
EPCQITSSIAQNAQGFELNIDFLFCCQAETLIFQLGLR
CCHHHHHHHHCCCCCCEECCEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
TDAINKCSATETAACCCVDVGTVMDNTDCPASYRHLFASQDEAQTMLAQLTEKAQSVAS
CCCCCCCCCCCHHHHHHHECCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
EPCQITSSIAQNAQGFELNIDFLFCCQAETLIFQLGLR
CCHHHHHHHHCCCCCCEECCEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]