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The map label for this gene is dedA [H]

Identifier: 238920607

GI number: 238920607

Start: 2612569

End: 2613234

Strand: Reverse

Name: dedA [H]

Synonym: NT01EI_2719

Alternate gene names: 238920607

Gene position: 2613234-2612569 (Counterclockwise)

Preceding gene: 238920608

Following gene: 238920606

Centisome position: 68.55

GC content: 54.8

Gene sequence:

>666_bases
ATGGAATACCTACAGTGGATTGTTGATTTTATTCTACATATTGATGTGCACCTGGCACAGCTGGTCGCGCAGTATGGCGT
GTGGATTTACGGCATACTCTTTTTGATCCTGTTCTGTGAAACCGGCCTGGTTGTAACGCCATTTCTGCCCGGCGATTCGC
TGCTGTTCGTCGCCGGCGCGCTGGCGTCGCTGCCGAGCAACGATCTGAATGTGCACCTGATGGTGCTGCTGATGGTGATC
GCTGCCATCGTGGGTGATGCGCTGAACTACACTATCGGGCGCCTGTTTGGCGAGCGGTTGTTCAGTAACCCCCACTCGCG
CGTGTTCCGCCGCAGCTATCTGGATAAAACCCACGCGTTTTATGAACGTCACGGTGGAAAGACGATTATTCTGGCGCGCT
TTGTGCCGATTGTGCGTACATTTGCGCCATTTGTTGCTGGCATGGGGCATATGTCCTATCGTCATTTCGCCGCCTATAAC
GTGATCGGGGCCCTGCTGTGGGTTCTGCTGTTTACCTATGCCGGCTACCTGTTCGGCAATGTGCCGGTGGTACAGGAGAA
CCTGAAGCTGCTGATCGTGGTGATCATCGTGGTTTCCATCCTGCCCGGGGTGATTGAAATTTGGCGTCATCGGCGTCAGG
CGCGGCGGAATAAGGCGGCAAAATAG

Upstream 100 bases:

>100_bases
CCGGGCTGTATCTGGTCGCCGTAGACTACCCGGCGCAATTTGCCCTGCCGCAGTCGCCGATGGGGCCGCTGTTTTTACCC
GATTAATCTCCGGAGCCGTT

Downstream 100 bases:

>100_bases
CCGCGTCATGCTCACCTAAAGTGGGTAAAAATGTAAACACTGCACGGTTCGACCAGTTTTTTATCCACACGGTCGAACCG
TTGTGGTTTAATGAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MEYLQWIVDFILHIDVHLAQLVAQYGVWIYGILFLILFCETGLVVTPFLPGDSLLFVAGALASLPSNDLNVHLMVLLMVI
AAIVGDALNYTIGRLFGERLFSNPHSRVFRRSYLDKTHAFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYLFGNVPVVQENLKLLIVVIIVVSILPGVIEIWRHRRQARRNKAAK

Sequences:

>Translated_221_residues
MEYLQWIVDFILHIDVHLAQLVAQYGVWIYGILFLILFCETGLVVTPFLPGDSLLFVAGALASLPSNDLNVHLMVLLMVI
AAIVGDALNYTIGRLFGERLFSNPHSRVFRRSYLDKTHAFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYLFGNVPVVQENLKLLIVVIIVVSILPGVIEIWRHRRQARRNKAAK
>Mature_221_residues
MEYLQWIVDFILHIDVHLAQLVAQYGVWIYGILFLILFCETGLVVTPFLPGDSLLFVAGALASLPSNDLNVHLMVLLMVI
AAIVGDALNYTIGRLFGERLFSNPHSRVFRRSYLDKTHAFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYLFGNVPVVQENLKLLIVVIIVVSILPGVIEIWRHRRQARRNKAAK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=85.7142857142857, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1789481, Length=156, Percent_Identity=35.8974358974359, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1789384, Length=195, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786252, Length=209, Percent_Identity=28.2296650717703, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25023; Mature: 25023

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLQWIVDFILHIDVHLAQLVAQYGVWIYGILFLILFCETGLVVTPFLPGDSLLFVAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLPSNDLNVHLMVLLMVIAAIVGDALNYTIGRLFGERLFSNPHSRVFRRSYLDKTHAF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYLFGN
HHHCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPVVQENLKLLIVVIIVVSILPGVIEIWRHRRQARRNKAAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEYLQWIVDFILHIDVHLAQLVAQYGVWIYGILFLILFCETGLVVTPFLPGDSLLFVAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLPSNDLNVHLMVLLMVIAAIVGDALNYTIGRLFGERLFSNPHSRVFRRSYLDKTHAF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYLFGN
HHHCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPVVQENLKLLIVVIIVVSILPGVIEIWRHRRQARRNKAAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]