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The map label for this gene is ubiX [H]

Identifier: 238920601

GI number: 238920601

Start: 2606291

End: 2606869

Strand: Reverse

Name: ubiX [H]

Synonym: NT01EI_2712

Alternate gene names: 238920601

Gene position: 2606869-2606291 (Counterclockwise)

Preceding gene: 238920602

Following gene: 238920596

Centisome position: 68.38

GC content: 62.52

Gene sequence:

>579_bases
ATGAAACGACTGATTATCGGAATCTCTGGCGCCAGCGGCGCGATCTACGGGGTCCGTCTGCTGCAGGCGCTACGGGCGCT
GTCGGCGGTGGAGACCCACCTGGTGATGAGTCAGGCAGCGCGTCAGACTCTGGCCCTGGAGACGGATCTCTCGCTAAAAG
AGGTGCAGGCGCTGGCGGATGTGGTACACGATGTGCGGGATATCGCCGCCTCGCTCTCCTCTGGCTCGTTTAAAACTGCC
GGGATGGTGATTTTGCCCTGCTCGATCAAAACGCTCTCGGCGATTGTGCACGGTTACAGCGACACCCTGTTGGTGCGCGC
TGCCGACGTGGTATTGAAAGAGCGGCGTCCGCTGGTGCTGTGCGTGCGGGAGACGCCGCTGCATCTGGGACACCTGCGCA
CAATGACCGCCGCCGCCGAGATGGGGGCGATCATCATGCCGCCGATGCCGGCATTTTATCACCGTCCTCGGCGGATTGAG
GATCTCGTCGACCAGACGGTCAACCGGGTGCTGGATCAGCTGGACATCTGTCTGCCGCAGGATCTGTTCCCACGCTGGCA
GGGGCCTGTGGCAGGCTAA

Upstream 100 bases:

>100_bases
GCCGCCGGGCCGCATATGCGGCCCGTTTTTACTTGCACGCTCGCCCGCCTTGCGGCAAAGTCGCTGCAGCAAAGCGTTGA
ATAAGGATAAGTGACGGGCG

Downstream 100 bases:

>100_bases
CCCTCTCCCGCCATATTGAGCTGGCTGCCGGTGATGGAGCCCGCCACCGGTGAGGCCAGCCACAGCGCCAGTTCGGCGAT
CGACTGCACCGTGCCCTCTA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKRLIIGISGASGAIYGVRLLQALRALSAVETHLVMSQAARQTLALETDLSLKEVQALADVVHDVRDIAASLSSGSFKTA
GMVILPCSIKTLSAIVHGYSDTLLVRAADVVLKERRPLVLCVRETPLHLGHLRTMTAAAEMGAIIMPPMPAFYHRPRRIE
DLVDQTVNRVLDQLDICLPQDLFPRWQGPVAG

Sequences:

>Translated_192_residues
MKRLIIGISGASGAIYGVRLLQALRALSAVETHLVMSQAARQTLALETDLSLKEVQALADVVHDVRDIAASLSSGSFKTA
GMVILPCSIKTLSAIVHGYSDTLLVRAADVVLKERRPLVLCVRETPLHLGHLRTMTAAAEMGAIIMPPMPAFYHRPRRIE
DLVDQTVNRVLDQLDICLPQDLFPRWQGPVAG
>Mature_192_residues
MKRLIIGISGASGAIYGVRLLQALRALSAVETHLVMSQAARQTLALETDLSLKEVQALADVVHDVRDIAASLSSGSFKTA
GMVILPCSIKTLSAIVHGYSDTLLVRAADVVLKERRPLVLCVRETPLHLGHLRTMTAAAEMGAIIMPPMPAFYHRPRRIE
DLVDQTVNRVLDQLDICLPQDLFPRWQGPVAG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=188, Percent_Identity=80.3191489361702, Blast_Score=318, Evalue=2e-88,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=49.1978609625668, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20895; Mature: 20895

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIIGISGASGAIYGVRLLQALRALSAVETHLVMSQAARQTLALETDLSLKEVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VVHDVRDIAASLSSGSFKTAGMVILPCSIKTLSAIVHGYSDTLLVRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE
CVRETPLHLGHLRTMTAAAEMGAIIMPPMPAFYHRPRRIEDLVDQTVNRVLDQLDICLPQ
EEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCH
DLFPRWQGPVAG
HHCCCCCCCCCC
>Mature Secondary Structure
MKRLIIGISGASGAIYGVRLLQALRALSAVETHLVMSQAARQTLALETDLSLKEVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VVHDVRDIAASLSSGSFKTAGMVILPCSIKTLSAIVHGYSDTLLVRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE
CVRETPLHLGHLRTMTAAAEMGAIIMPPMPAFYHRPRRIEDLVDQTVNRVLDQLDICLPQ
EEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCH
DLFPRWQGPVAG
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]