| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920593
Identifier: 238920593
GI number: 238920593
Start: 2600527
End: 2601105
Strand: Reverse
Name: 238920593
Synonym: NT01EI_2705
Alternate gene names: NA
Gene position: 2601105-2600527 (Counterclockwise)
Preceding gene: 238920594
Following gene: 238920591
Centisome position: 68.23
GC content: 57.34
Gene sequence:
>579_bases ATGAAACCCGTATTACCTCTGGTTGCTGGCGTGATGCTGGCTGCACTCTCGGCGCTGCCGGCGCAGGCCGGTCTGTTTTC CCCTTCTGAAGTGGATGCGGAAAAGCAGGCGGTACAACTGGCGCGGGAAACAGCGAGTGGGAAGTATCAGCTGCTGACCG TGCAGGAACTTAAGCAGTGGATGGGTGAGAAAAAGCCGATGCTGATCGTCGACACCATGCCCTTTGCCGACTCCTATAAG AAGCAGCATATCCCGGGCGCGTTGAATATGGCGTTCCCGATGGGGGATATGACCGTGTGGGACAAAGCCAGCATGGGGGC GATAACGCAGGCCGATTTTATGCGTATGCTGGGCGCCGATAAGGATCGGATGCTGGTATTCTACTGCGGTTTTGTTAAGT GCGCTCGTTCACATAATGCAGCCATGTGGGCCAGAACGCTGGGCTACCGGCATGTCTATCGCCTGCCAGGCGGGATTACC GCCTGGAAAGAGGCTGGTTATCCGGTAGATAAGGCCTCTTCGGTAACGCCTGTATCGGCCGATGCGGCGAAGGGGAGCTC CTGTACTCAGGGCTGCTGA
Upstream 100 bases:
>100_bases GTAAGCTAAGCGTGGCAAATTAGCATTTGCCACGCTAGTCACATCATTTTGTTATATAAAAAGTTACCGTGAAATTGGGA CTTTTATATAAGGAAAAATG
Downstream 100 bases:
>100_bases GGAGAGCGTGCCCGTACTCTGCCGGTGGACAGATATGGGTAATGTGTCCTGATATAGATTGATACTTTTACGCCTGAAAC GCCTGATGGATATCACCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Methylamine Utilization Protein; Rhodanese-Like Domain-Containing Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKPVLPLVAGVMLAALSALPAQAGLFSPSEVDAEKQAVQLARETASGKYQLLTVQELKQWMGEKKPMLIVDTMPFADSYK KQHIPGALNMAFPMGDMTVWDKASMGAITQADFMRMLGADKDRMLVFYCGFVKCARSHNAAMWARTLGYRHVYRLPGGIT AWKEAGYPVDKASSVTPVSADAAKGSSCTQGC
Sequences:
>Translated_192_residues MKPVLPLVAGVMLAALSALPAQAGLFSPSEVDAEKQAVQLARETASGKYQLLTVQELKQWMGEKKPMLIVDTMPFADSYK KQHIPGALNMAFPMGDMTVWDKASMGAITQADFMRMLGADKDRMLVFYCGFVKCARSHNAAMWARTLGYRHVYRLPGGIT AWKEAGYPVDKASSVTPVSADAAKGSSCTQGC >Mature_192_residues MKPVLPLVAGVMLAALSALPAQAGLFSPSEVDAEKQAVQLARETASGKYQLLTVQELKQWMGEKKPMLIVDTMPFADSYK KQHIPGALNMAFPMGDMTVWDKASMGAITQADFMRMLGADKDRMLVFYCGFVKCARSHNAAMWARTLGYRHVYRLPGGIT AWKEAGYPVDKASSVTPVSADAAKGSSCTQGC
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20799; Mature: 20799
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVLPLVAGVMLAALSALPAQAGLFSPSEVDAEKQAVQLARETASGKYQLLTVQELKQW CCCHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH MGEKKPMLIVDTMPFADSYKKQHIPGALNMAFPMGDMTVWDKASMGAITQADFMRMLGAD HCCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHCCC KDRMLVFYCGFVKCARSHNAAMWARTLGYRHVYRLPGGITAWKEAGYPVDKASSVTPVSA CCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCHHHHCCCCCCCCCCCCCCCC DAAKGSSCTQGC CCCCCCCCCCCC >Mature Secondary Structure MKPVLPLVAGVMLAALSALPAQAGLFSPSEVDAEKQAVQLARETASGKYQLLTVQELKQW CCCHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH MGEKKPMLIVDTMPFADSYKKQHIPGALNMAFPMGDMTVWDKASMGAITQADFMRMLGAD HCCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHCCC KDRMLVFYCGFVKCARSHNAAMWARTLGYRHVYRLPGGITAWKEAGYPVDKASSVTPVSA CCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCHHHHCCCCCCCCCCCCCCCC DAAKGSSCTQGC CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA