Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920586

Identifier: 238920586

GI number: 238920586

Start: 2593228

End: 2594244

Strand: Direct

Name: 238920586

Synonym: NT01EI_2698

Alternate gene names: NA

Gene position: 2593228-2594244 (Clockwise)

Preceding gene: 238920583

Following gene: 238920592

Centisome position: 68.02

GC content: 48.77

Gene sequence:

>1017_bases
ATGAATATCGTATTTCTGGGTATTGATCTGGCTAAAAATGTTTTTCAACTCTGCGGGTTAAACCAGGCCGGCAAACCGGT
TTATACGAAACGAACTGGCCGAAAAGAATTGCTCCAGACGCTGGCAAATATTCCTGCATGTCTGATTGGGATCGAAGCGT
CCACCGGGGCATTTTACTGGCAGCGTGAGTTTGAGAAACTGGGGCACAAAGTAAAGGTCATCAGTCCTCAGTATGTAAAA
CCCTTTGTCCGCGGGCAAAAAAATGATGGTAATAATGCACAGGCCATCGCAGTGGCTCTGATGCAACCGACAATGCAGTT
CGTGCCACCCAAAAGCCCCGAACAGCAGGATATCCAGGCTTTACACCGGGCAAGGCAGCGTATTATCAATCACCGCACTG
CTACAGTCTGTCAAATAAGAGGGCTGTTACTTGACCGGGGGATCCCCATTGGCAGTGCTGTCTCCAGAGCTCGCCGGGCT
ATTCCTCTTATCCTTGAAGATGCAGAAAACGGTCTACGTTCCCGTATGCGCAGAACAATTGCCGAGCTCTATGAGCTCTT
TAACGATCTCGAGCGTCGGATCCATTTTTTTGATAAGGAAATTGAAACAGTATTCAGGCAATCAGAAGCCTGTCAGCGTA
TCGCCAGAGTTAAAGGCATTGACCCTAAAACGGCCACGGCCGTTGTTGCTGCTATTGGCAAAGGAACTGAATTTAAGAAT
GGCCGCCACTTTGCTGCATGGCTGGGTCTGGTTCCACGCCAGCATTCGAGTGGCGACAGGCAGGTGCTGATGAATATGAC
GAAAAAAGGCGACAAGCATCTGCGGACTCTTTTTATTCATGGTGCCCGCGCTGTCGTCAGGGTTGCCACGAATAACAATG
ATGGTCATATGAATCAGTGGGTTAATCAGTTAAAGGAACGGCGCAGATTTAATAAAACGACCGTGGCGGTCGCTAACAAA
AACGCGCGAATAATCTGGTCGATGCTGAGAAATGAGACCGAGTATCAGGTAGTGTGA

Upstream 100 bases:

>100_bases
TTACTCCCATGCCGCCAAACTTTTTTTCCCAATTAATGGGATGGACTACCTCCTCCCGCTGCGGTTAACTGTACGAAATG
TGCTCACCAGGAGAATCACC

Downstream 100 bases:

>100_bases
AATTAATCCCCTGCCAGAAAAAGTTGCAGCGTACTGAGAAATGGTGACAGGTTGCACCTGCACAATCGGAACCTGATTTT
TATACTGGCCTCAGAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYWQREFEKLGHKVKVISPQYVK
PFVRGQKNDGNNAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQRIINHRTATVCQIRGLLLDRGIPIGSAVSRARRA
IPLILEDAENGLRSRMRRTIAELYELFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIDPKTATAVVAAIGKGTEFKN
GRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQWVNQLKERRRFNKTTVAVANK
NARIIWSMLRNETEYQVV

Sequences:

>Translated_338_residues
MNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYWQREFEKLGHKVKVISPQYVK
PFVRGQKNDGNNAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQRIINHRTATVCQIRGLLLDRGIPIGSAVSRARRA
IPLILEDAENGLRSRMRRTIAELYELFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIDPKTATAVVAAIGKGTEFKN
GRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQWVNQLKERRRFNKTTVAVANK
NARIIWSMLRNETEYQVV
>Mature_338_residues
MNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYWQREFEKLGHKVKVISPQYVK
PFVRGQKNDGNNAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQRIINHRTATVCQIRGLLLDRGIPIGSAVSRARRA
IPLILEDAENGLRSRMRRTIAELYELFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIDPKTATAVVAAIGKGTEFKN
GRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQWVNQLKERRRFNKTTVAVANK
NARIIWSMLRNETEYQVV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38365; Mature: 38365

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYW
CEEEEEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEEEECCCCHHHH
QREFEKLGHKVKVISPQYVKPFVRGQKNDGNNAQAIAVALMQPTMQFVPPKSPEQQDIQA
HHHHHHHCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LHRARQRIINHRTATVCQIRGLLLDRGIPIGSAVSRARRAIPLILEDAENGLRSRMRRTI
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AELYELFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIDPKTATAVVAAIGKGTEFKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
GRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQW
CCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEECCCEEEEEEECCCCCHHHHH
VNQLKERRRFNKTTVAVANKNARIIWSMLRNETEYQVV
HHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYW
CEEEEEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEEEECCCCHHHH
QREFEKLGHKVKVISPQYVKPFVRGQKNDGNNAQAIAVALMQPTMQFVPPKSPEQQDIQA
HHHHHHHCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LHRARQRIINHRTATVCQIRGLLLDRGIPIGSAVSRARRAIPLILEDAENGLRSRMRRTI
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AELYELFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIDPKTATAVVAAIGKGTEFKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
GRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQW
CCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEECCCEEEEEEECCCCCHHHHH
VNQLKERRRFNKTTVAVANKNARIIWSMLRNETEYQVV
HHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]