| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yejH [H]
Identifier: 238920496
GI number: 238920496
Start: 2498206
End: 2498586
Strand: Direct
Name: yejH [H]
Synonym: NT01EI_2607
Alternate gene names: 238920496
Gene position: 2498206-2498586 (Clockwise)
Preceding gene: 238920495
Following gene: 238920497
Centisome position: 65.53
GC content: 66.14
Gene sequence:
>381_bases ATGCTGAAGGCGGCGCTGAGGCTGAAAGATGCGCTGGTGCTACGCTGCGGCGGAATGCAGCTGCGCGACGGGGAGGATGC CAAGGGCGAGTGGCTGCAGATCACCTACTACGACGAGGACGGTGCCGACGTCAGCGAACGCTTCCGCCTGACCACCCCGG CTCAGCGCACTGCCTTTACCCAGCTATTTCTACGCCCGCACCAGCGGGCGCCGGGCTGTGAGCTGAGCTGGCAGCGGGCG GCCGATATCGTAGCGCAGCAGGAGGCCCTGCGCGCGCCCGACTTCGTGGTGGCGCGCCGACGGGGCCAGTTCTGGCAGGT GCGGCAAAAAGTATTTGACTATCAGGGGCGTTTTCGCAAGGCGAACCAGCTGCGCGGCTAA
Upstream 100 bases:
>100_bases CGCTTCCGCTTTAAAAACTGCCCGCAGTGCAATGCGGAAAAACGATATCGCCGCCCGCCGCTGCCATCAGTGCGCCGCGC TGCTGGTCGACGCTGACGAT
Downstream 100 bases:
>100_bases TTTATTTGCCGTCCCGGCGCGGATCGGCTAGAATGCCGCCCGCCTTGTCGAGGGTGTTTAGCCTGAGACGGGCACACGAT ATCCCGTCTGCTGCTGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MLKAALRLKDALVLRCGGMQLRDGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFTQLFLRPHQRAPGCELSWQRA ADIVAQQEALRAPDFVVARRRGQFWQVRQKVFDYQGRFRKANQLRG
Sequences:
>Translated_126_residues MLKAALRLKDALVLRCGGMQLRDGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFTQLFLRPHQRAPGCELSWQRA ADIVAQQEALRAPDFVVARRRGQFWQVRQKVFDYQGRFRKANQLRG >Mature_126_residues MLKAALRLKDALVLRCGGMQLRDGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFTQLFLRPHQRAPGCELSWQRA ADIVAQQEALRAPDFVVARRRGQFWQVRQKVFDYQGRFRKANQLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=126, Percent_Identity=76.984126984127, Blast_Score=204, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 14628; Mature: 14628
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAALRLKDALVLRCGGMQLRDGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFT CCCHHHHHHHHEEEEECCCEECCCCCCCCCEEEEEEECCCCCCHHHCEEECCCHHHHHHH QLFLRPHQRAPGCELSWQRAADIVAQQEALRAPDFVVARRRGQFWQVRQKVFDYQGRFRK HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEHHHCCHHHHHHHHHHHHHCHHHC ANQLRG CCCCCC >Mature Secondary Structure MLKAALRLKDALVLRCGGMQLRDGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFT CCCHHHHHHHHEEEEECCCEECCCCCCCCCEEEEEEECCCCCCHHHCEEECCCHHHHHHH QLFLRPHQRAPGCELSWQRAADIVAQQEALRAPDFVVARRRGQFWQVRQKVFDYQGRFRK HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEHHHCCHHHHHHHHHHHHHCHHHC ANQLRG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]