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The map label for this gene is spr [H]

Identifier: 238920477

GI number: 238920477

Start: 2481827

End: 2482423

Strand: Direct

Name: spr [H]

Synonym: NT01EI_2588

Alternate gene names: 238920477

Gene position: 2481827-2482423 (Clockwise)

Preceding gene: 238920476

Following gene: 238920478

Centisome position: 65.1

GC content: 53.94

Gene sequence:

>597_bases
ATGGTCAAGTCTCAACCAGTTCTGAGATACATTCTGCGTCTGGCACCCGCCATTGCCGCCGCAGTGTTGCTTTCGGCATG
TACTACAGCTCCCTCCGATCGCTACGCACAAACTGATACGCATGTAGTCAACAATAAAGACAATCTATTACTACAGGCGT
CTCAGGATGAGTTTGAGGAAATGGTGCGCACTCTGGATGTTAAATCCAAGATTATGGATCAATACGCCAGCTGGAAGGGC
GTACGTTATCGCCTGGGCGGCAACAGCAAGCGCGGTATCGACTGCTCTGCATTTGTTCAGCGTACTTTCCGCGAACAGTT
TGGCTTGGAGTTACCGCGCTCAACCTCGCAGCAGGAGGATACCGGCCACGCTATCAAACGCTCTAAGCTGCGTATCGGCG
ATCTGGTTCTGTTCCGCACCGGCTCCACGGGTCGCCACATCGGTATCTATCTGGGCAACGACCAGTTTGTTCACGCCTCC
ACCAGCAGCGGTGTCATGATCTCCAATCTAAACGATTCCTACTGGAATAAACGCTACCGTGAAGCGCGCCGGGTACTCTC
CGGTACCCAGCGGGCGCAGGCTGACAACCACAGCTAA

Upstream 100 bases:

>100_bases
CTCAGCGCGATTGTCAGTACCCCACGTGGAAATTAGTCTCTGGAAGGGTAATTTTCGGATAGCGACAGCTCGTTAAGGAC
AACAAGGGAAACAATTTATA

Downstream 100 bases:

>100_bases
ATTGCCCCTGCTTTTTCTCCCATCCTAAAAAACGCTGCTGTTGCAGCGTTTTTTATCGGTATTAATATAATATCGAAGAT
AAAACGCTACTTCGTAGCAA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MVKSQPVLRYILRLAPAIAAAVLLSACTTAPSDRYAQTDTHVVNNKDNLLLQASQDEFEEMVRTLDVKSKIMDQYASWKG
VRYRLGGNSKRGIDCSAFVQRTFREQFGLELPRSTSQQEDTGHAIKRSKLRIGDLVLFRTGSTGRHIGIYLGNDQFVHAS
TSSGVMISNLNDSYWNKRYREARRVLSGTQRAQADNHS

Sequences:

>Translated_198_residues
MVKSQPVLRYILRLAPAIAAAVLLSACTTAPSDRYAQTDTHVVNNKDNLLLQASQDEFEEMVRTLDVKSKIMDQYASWKG
VRYRLGGNSKRGIDCSAFVQRTFREQFGLELPRSTSQQEDTGHAIKRSKLRIGDLVLFRTGSTGRHIGIYLGNDQFVHAS
TSSGVMISNLNDSYWNKRYREARRVLSGTQRAQADNHS
>Mature_198_residues
MVKSQPVLRYILRLAPAIAAAVLLSACTTAPSDRYAQTDTHVVNNKDNLLLQASQDEFEEMVRTLDVKSKIMDQYASWKG
VRYRLGGNSKRGIDCSAFVQRTFREQFGLELPRSTSQQEDTGHAIKRSKLRIGDLVLFRTGSTGRHIGIYLGNDQFVHAS
TSSGVMISNLNDSYWNKRYREARRVLSGTQRAQADNHS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=187, Percent_Identity=69.5187165775401, Blast_Score=278, Evalue=2e-76,
Organism=Escherichia coli, GI1788001, Length=124, Percent_Identity=50, Blast_Score=129, Evalue=9e-32,
Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=37.0967741935484, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 22282; Mature: 22282

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSQPVLRYILRLAPAIAAAVLLSACTTAPSDRYAQTDTHVVNNKDNLLLQASQDEFEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECHHHHHH
MVRTLDVKSKIMDQYASWKGVRYRLGGNSKRGIDCSAFVQRTFREQFGLELPRSTSQQED
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
TGHAIKRSKLRIGDLVLFRTGSTGRHIGIYLGNDQFVHASTSSGVMISNLNDSYWNKRYR
HHHHHHHCCCEECEEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHH
EARRVLSGTQRAQADNHS
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVKSQPVLRYILRLAPAIAAAVLLSACTTAPSDRYAQTDTHVVNNKDNLLLQASQDEFEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECHHHHHH
MVRTLDVKSKIMDQYASWKGVRYRLGGNSKRGIDCSAFVQRTFREQFGLELPRSTSQQED
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
TGHAIKRSKLRIGDLVLFRTGSTGRHIGIYLGNDQFVHASTSSGVMISNLNDSYWNKRYR
HHHHHHHCCCEECEEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHH
EARRVLSGTQRAQADNHS
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]