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The map label for this gene is tse [H]

Identifier: 238920470

GI number: 238920470

Start: 2475223

End: 2476809

Strand: Reverse

Name: tse [H]

Synonym: NT01EI_2581

Alternate gene names: 238920470

Gene position: 2476809-2475223 (Counterclockwise)

Preceding gene: 238920471

Following gene: 238920468

Centisome position: 64.97

GC content: 53.56

Gene sequence:

>1587_bases
ATGTTTTCTAAAATTAAAATAGCCAGACTGCTTCCCATCGTAATTATTGCAATTTTTTTAATTCAAGCGGTTTCATTTAT
ATTCTTTTACAATGTTATTAATAGTGATGCTGAGCATATTCAGGAAAACTACCAGTCGCGGCGTAACGTTATGTTTTTTA
GCGATGCATGGATCAACCTGGTTCAGGCACGATCCACGCTGCGAGAGGCTCAAAATCAGGCCGCTGCGGTCACAGTCGAC
CGGGAGCGGTTACAGGGGCTCTTCTCCCGGGCTGGGGGGAGGATCGCAGAAGCGCGCAGCAATTATGAGGCCTATAAGGA
TATCCCTGACGTTGACGGACTCGACGTGAGTGTTGTTAATCGGGTTAATAATGACTTCACGAAATATCTTTCCACGGTTT
CTGAAATAGTTGAGTTGCTTAAGCAGAACGATATTCAACGCGCGATAGAGTTGAATCAACAGCTTATTTCACTGAATATT
GAAACACAGCATGCATATAATATATGGCAGGAAGAACATGATCGATTAATGGAGATCAGCGTTCAGAAAAGCCAGGGTGC
CTGTCAGACCATGAAGTGGGCCTTGCTGCTGCTGGCGCTGTTGTCGATCCTGTGCCTGCTGCTGTGCTGGGTGTCGGTTA
AGCAGGCGATGCTGATACCGCTGCAGAGCATCATCCGCAGTGTACAGCGTATTGCCAAGGGTGATCTGACGCAGCGCTTT
CAGCGCCATAGTCAGAGTGAAATGGGGCTTTTGGCCGCACATATCGATGATATGCAGCGGGCGCTGCGAGAGATCGTCGC
CTCCGTTCGTCACAGCGCCAGTGCCATCTACTCCGGCTCCGGCGAGATTGCAGCTGGGGGCAGCAATCTGGCCTCCCGTA
CCGAGGAGCAGGCCGCTGCGTTGGAGGAGACCGCCGCGAGCATGGAGCAAATGACCGCCATTGTTGATAAGAATACGGAT
AGTTCACGCCACGTAGCGCAGTTGGCCGGCGAGGCAACCCACACGGCGGAGTCCGGTGGACAGGCCATCGCAGAGGTGGT
GAAGACCATGGAAGAGATCGCCGGCAACTCTAAACATATCGCCTCTATTACCAATGTCATCGATAGCATTGCCTTCCAGA
CCAATATACTGGCGCTTAACGCCGCCGTGGAGGCAGCGCGTGCCGGCGATCAGGGACGTGGCTTCGCCGTGGTGGCCAGT
GAGGTACGCAGCCTGGCACAGCGTAGCGCCCAGGCGGCGAAAGAGATCAATACGCTGATCGCCTCGTCGGTCGAACGGGT
CAATCAGGGCAGTGTCAATGTGTCGGCAGCCGGCGCCACCATGGAAAATATCATTAGCGCAATTACCTATTTATCCGGTC
TGATCGGGGAAATCTCGTCGAGCGCAGAAGAGCAGAGCCGTGGGATTGCCCAGATCAATCAGGCCATCAACCAGATGGAT
ACCGTGACCCAGCATAACGCTACGCTGGTGGAGGAGTCTACGGCGGCATCCCATGCGCTGGAAGGACAGGCCAAGGCGTT
GACCGAGATCGTAGCGGCGTTCAACGTTAGCGATGTGCCGCTGGAGACGACGGCAGCTTTGAGATAA

Upstream 100 bases:

>100_bases
TATGTGCGGTCATTTATGTTTTAAAAAATGATAAAGAAAAAAGAAGCCCAGCCGATAACCTCTAACTCATGAGTACAAAT
GACAAGAGAATATCGGTCAC

Downstream 100 bases:

>100_bases
GGGTACGCCCGTGTCGGGTGCGCCGCAGTCTACCGCCGTCGGGCGGCAGACTGCGTTGGGACAGGATTATTCCTGACTTG
CCAGCGCGGCGCAGGTACGG

Product: methyl-accepting chemotaxis protein I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MFSKIKIARLLPIVIIAIFLIQAVSFIFFYNVINSDAEHIQENYQSRRNVMFFSDAWINLVQARSTLREAQNQAAAVTVD
RERLQGLFSRAGGRIAEARSNYEAYKDIPDVDGLDVSVVNRVNNDFTKYLSTVSEIVELLKQNDIQRAIELNQQLISLNI
ETQHAYNIWQEEHDRLMEISVQKSQGACQTMKWALLLLALLSILCLLLCWVSVKQAMLIPLQSIIRSVQRIAKGDLTQRF
QRHSQSEMGLLAAHIDDMQRALREIVASVRHSASAIYSGSGEIAAGGSNLASRTEEQAAALEETAASMEQMTAIVDKNTD
SSRHVAQLAGEATHTAESGGQAIAEVVKTMEEIAGNSKHIASITNVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVAS
EVRSLAQRSAQAAKEINTLIASSVERVNQGSVNVSAAGATMENIISAITYLSGLIGEISSSAEEQSRGIAQINQAINQMD
TVTQHNATLVEESTAASHALEGQAKALTEIVAAFNVSDVPLETTAALR

Sequences:

>Translated_528_residues
MFSKIKIARLLPIVIIAIFLIQAVSFIFFYNVINSDAEHIQENYQSRRNVMFFSDAWINLVQARSTLREAQNQAAAVTVD
RERLQGLFSRAGGRIAEARSNYEAYKDIPDVDGLDVSVVNRVNNDFTKYLSTVSEIVELLKQNDIQRAIELNQQLISLNI
ETQHAYNIWQEEHDRLMEISVQKSQGACQTMKWALLLLALLSILCLLLCWVSVKQAMLIPLQSIIRSVQRIAKGDLTQRF
QRHSQSEMGLLAAHIDDMQRALREIVASVRHSASAIYSGSGEIAAGGSNLASRTEEQAAALEETAASMEQMTAIVDKNTD
SSRHVAQLAGEATHTAESGGQAIAEVVKTMEEIAGNSKHIASITNVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVAS
EVRSLAQRSAQAAKEINTLIASSVERVNQGSVNVSAAGATMENIISAITYLSGLIGEISSSAEEQSRGIAQINQAINQMD
TVTQHNATLVEESTAASHALEGQAKALTEIVAAFNVSDVPLETTAALR
>Mature_528_residues
MFSKIKIARLLPIVIIAIFLIQAVSFIFFYNVINSDAEHIQENYQSRRNVMFFSDAWINLVQARSTLREAQNQAAAVTVD
RERLQGLFSRAGGRIAEARSNYEAYKDIPDVDGLDVSVVNRVNNDFTKYLSTVSEIVELLKQNDIQRAIELNQQLISLNI
ETQHAYNIWQEEHDRLMEISVQKSQGACQTMKWALLLLALLSILCLLLCWVSVKQAMLIPLQSIIRSVQRIAKGDLTQRF
QRHSQSEMGLLAAHIDDMQRALREIVASVRHSASAIYSGSGEIAAGGSNLASRTEEQAAALEETAASMEQMTAIVDKNTD
SSRHVAQLAGEATHTAESGGQAIAEVVKTMEEIAGNSKHIASITNVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVAS
EVRSLAQRSAQAAKEINTLIASSVERVNQGSVNVSAAGATMENIISAITYLSGLIGEISSSAEEQSRGIAQINQAINQMD
TVTQHNATLVEESTAASHALEGQAKALTEIVAAFNVSDVPLETTAALR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=535, Percent_Identity=40.9345794392523, Blast_Score=345, Evalue=3e-96,
Organism=Escherichia coli, GI1788195, Length=529, Percent_Identity=41.2098298676749, Blast_Score=332, Evalue=3e-92,
Organism=Escherichia coli, GI1787690, Length=524, Percent_Identity=39.6946564885496, Blast_Score=326, Evalue=2e-90,
Organism=Escherichia coli, GI1788194, Length=530, Percent_Identity=36.6037735849057, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=36.890243902439, Blast_Score=204, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57347; Mature: 57347

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKIKIARLLPIVIIAIFLIQAVSFIFFYNVINSDAEHIQENYQSRRNVMFFSDAWINL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEHHHHHHH
VQARSTLREAQNQAAAVTVDRERLQGLFSRAGGRIAEARSNYEAYKDIPDVDGLDVSVVN
HHHHHHHHHHHCCHHEEEECHHHHHHHHHHCCCCHHHHHHCHHHHHCCCCCCCCCHHHHH
RVNNDFTKYLSTVSEIVELLKQNDIQRAIELNQQLISLNIETQHAYNIWQEEHDRLMEIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH
VQKSQGACQTMKWALLLLALLSILCLLLCWVSVKQAMLIPLQSIIRSVQRIAKGDLTQRF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QRHSQSEMGLLAAHIDDMQRALREIVASVRHSASAIYSGSGEIAAGGSNLASRTEEQAAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
LEETAASMEQMTAIVDKNTDSSRHVAQLAGEATHTAESGGQAIAEVVKTMEEIAGNSKHI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
ASITNVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRSLAQRSAQAAKEINTLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSVERVNQGSVNVSAAGATMENIISAITYLSGLIGEISSSAEEQSRGIAQINQAINQMD
HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TVTQHNATLVEESTAASHALEGQAKALTEIVAAFNVSDVPLETTAALR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MFSKIKIARLLPIVIIAIFLIQAVSFIFFYNVINSDAEHIQENYQSRRNVMFFSDAWINL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEHHHHHHH
VQARSTLREAQNQAAAVTVDRERLQGLFSRAGGRIAEARSNYEAYKDIPDVDGLDVSVVN
HHHHHHHHHHHCCHHEEEECHHHHHHHHHHCCCCHHHHHHCHHHHHCCCCCCCCCHHHHH
RVNNDFTKYLSTVSEIVELLKQNDIQRAIELNQQLISLNIETQHAYNIWQEEHDRLMEIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH
VQKSQGACQTMKWALLLLALLSILCLLLCWVSVKQAMLIPLQSIIRSVQRIAKGDLTQRF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QRHSQSEMGLLAAHIDDMQRALREIVASVRHSASAIYSGSGEIAAGGSNLASRTEEQAAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
LEETAASMEQMTAIVDKNTDSSRHVAQLAGEATHTAESGGQAIAEVVKTMEEIAGNSKHI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
ASITNVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRSLAQRSAQAAKEINTLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSVERVNQGSVNVSAAGATMENIISAITYLSGLIGEISSSAEEQSRGIAQINQAINQMD
HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TVTQHNATLVEESTAASHALEGQAKALTEIVAAFNVSDVPLETTAALR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]