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The map label for this gene is ycaO [H]

Identifier: 238920351

GI number: 238920351

Start: 2353824

End: 2355584

Strand: Direct

Name: ycaO [H]

Synonym: NT01EI_2461

Alternate gene names: 238920351

Gene position: 2353824-2355584 (Clockwise)

Preceding gene: 238920335

Following gene: 238920352

Centisome position: 61.74

GC content: 62.29

Gene sequence:

>1761_bases
ATGACACAGACCTTTATCCCCGGCAAAGATGCTGCGCTGGAAGACTCGATCGATCGTTTTCAGCAACAGCTGCAGGCGCT
GGGTTTTAATATAGAAGAGGCCAGCTGGCTGAACCCGGTGCCGCACGTCTGGTCGGTACATATCCGCGATCGCGACTGCC
CGCAGTGCTTCACCAATGGCAAAGGGGCCAGCAAAAAGGCGGCGCTGGCCTCAGCGCTGGGCGAATATGTTGAACGCCTG
TCCACCAACTACTTCTTTGCCGACTTCTATTTGGGCAACGCCATCGCCAACGGCGACTTTGTGCACTATCCGGACGAAAA
ATGGTTCCCGCTGCCGGAGGATGACCGCCTGCCTGCCGGGCTGCTGGACGATAGCCTGCGCACCTTCTACGATCCCGACG
GCGATCTGAGCGCCGACGATCTGATCGATCTGCAGTCTGGCAACGCCGAACGCGGGATCTGCGCGCTGCCCTTTATCCGC
CAGTCCGACTCGGCCACGGTCTATATTCCGGTCAATATCATCGGCAATCTGTATGTCTCCAACGGGATGTCCGCAGGCAA
TACCCCCAGCGAGGCCCGGGTGCAGGGGATGTCGGAAATCTTCGAACGTTATGTCAAAAACCGCATCATCGCCGAAGCCA
TCAGCCTGCCGGCGATCCCGCCGGAGACGCTGGCGCGCTATCCCCAGGTAGTCGAGGCCATCACCTCCCTGGAGCACGAA
GGCTTCCCGATTCTGGCCTATGACGCCTCGCTGGGTGGACGCTATCCGGTGATCTGCGTCGTGCTGTTCAACCCGGCCAA
CGGCACCTGCTTCGCCTCTTTCGGCGCTCACCCGGACTTTGGCGTCGCGCTGGAGCGTACCGTCACCGAGCTGCTGCAGG
GCCGCAGCCTGAAGGATCTGGACGTCTTCGCCGCGCCGACCTTCGATGATGAAGAGGTCGCCGACCACACCAACCTGGAG
ACCCACTTCATCGACTCCAGCGGCGCCCTCTCTTGGGATCTGTTCAAAGCGGATGCCGACTACCCGTTTGTCGACTGGAA
CTTCAGCGGCAGCAGCGAGCAGGAGTTCGCCACCCTGATGGCGCTGTTCGCCCGCGATGGTCAAGAGGTCTATATCGCCG
ACTACCGGCATCTGGGCGTCGACGCCTGCCGCATCCTGGCACCGGGCATGTCCGACATCTATCCGGCGGAGGATCTGCTG
CTGGCCAACAACAGCATGGGCGCCGGCCTGCGCACTACCCTGCTGCAGCTGCCAGACAGCGAATGGGAAGAGGAGGAGTA
CCTGCAGCTGCTGGCGCGCCTGGATGACGAGGGGATGGATGACTTTACCCGGGTGCGGGAGCTGCTGGGCATCGTCTGTG
ACAGCACCAGCGCCTGGCATACCCTGCGTATCGGTGAATTGAAGGCGCTGCTGGCGCTGGCCGGCGGCGATCTGGAGCAG
GCACTGATCTGGACGGAGTGGACCCAGGAGTTCAATGCCTCCGTCTTCAGCGCCGAGCGCGCCGCGTTTTACCGCTGCCT
GCACACCCTGCTGCTGCTGGCGATGGAGGAGCAGCGCGATCCCGACCAATATATGGAGGCCTTTGCGCGCATGTACGGCA
CAGACATCCTTGAGACGGTGCTGGCCAGCCTGAACGGCGATCTGCGCTTCCACGGGCTGACGGCGGTCGACGACGCGTTC
AGCGCGCTGCCGGCCCACCGGGCCATGCTGGCGGCCTATGAAAAACTACAGCAAGCCAAGCGTCGATTCTGGCAAGCCTG
A

Upstream 100 bases:

>100_bases
CATATAAAAAATGTGACCTCAGACAGATATAGTGAATACGTGGAGGAATAGGTTAAAAAAACGTATCATGCGCTTTTGAC
CTCCGCATAAAGTGACACAA

Downstream 100 bases:

>100_bases
TATACAGCAGCTGGCGACCACCGCGGTGATCGCCGGTTTACAGCACACGCCTTACACCTTATGCTGTTCACCGCGCGGTC
ACGGGCGGTGGCAGTATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTQTFIPGKDAALEDSIDRFQQQLQALGFNIEEASWLNPVPHVWSVHIRDRDCPQCFTNGKGASKKAALASALGEYVERL
STNYFFADFYLGNAIANGDFVHYPDEKWFPLPEDDRLPAGLLDDSLRTFYDPDGDLSADDLIDLQSGNAERGICALPFIR
QSDSATVYIPVNIIGNLYVSNGMSAGNTPSEARVQGMSEIFERYVKNRIIAEAISLPAIPPETLARYPQVVEAITSLEHE
GFPILAYDASLGGRYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFAAPTFDDEEVADHTNLE
THFIDSSGALSWDLFKADADYPFVDWNFSGSSEQEFATLMALFARDGQEVYIADYRHLGVDACRILAPGMSDIYPAEDLL
LANNSMGAGLRTTLLQLPDSEWEEEEYLQLLARLDDEGMDDFTRVRELLGIVCDSTSAWHTLRIGELKALLALAGGDLEQ
ALIWTEWTQEFNASVFSAERAAFYRCLHTLLLLAMEEQRDPDQYMEAFARMYGTDILETVLASLNGDLRFHGLTAVDDAF
SALPAHRAMLAAYEKLQQAKRRFWQA

Sequences:

>Translated_586_residues
MTQTFIPGKDAALEDSIDRFQQQLQALGFNIEEASWLNPVPHVWSVHIRDRDCPQCFTNGKGASKKAALASALGEYVERL
STNYFFADFYLGNAIANGDFVHYPDEKWFPLPEDDRLPAGLLDDSLRTFYDPDGDLSADDLIDLQSGNAERGICALPFIR
QSDSATVYIPVNIIGNLYVSNGMSAGNTPSEARVQGMSEIFERYVKNRIIAEAISLPAIPPETLARYPQVVEAITSLEHE
GFPILAYDASLGGRYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFAAPTFDDEEVADHTNLE
THFIDSSGALSWDLFKADADYPFVDWNFSGSSEQEFATLMALFARDGQEVYIADYRHLGVDACRILAPGMSDIYPAEDLL
LANNSMGAGLRTTLLQLPDSEWEEEEYLQLLARLDDEGMDDFTRVRELLGIVCDSTSAWHTLRIGELKALLALAGGDLEQ
ALIWTEWTQEFNASVFSAERAAFYRCLHTLLLLAMEEQRDPDQYMEAFARMYGTDILETVLASLNGDLRFHGLTAVDDAF
SALPAHRAMLAAYEKLQQAKRRFWQA
>Mature_585_residues
TQTFIPGKDAALEDSIDRFQQQLQALGFNIEEASWLNPVPHVWSVHIRDRDCPQCFTNGKGASKKAALASALGEYVERLS
TNYFFADFYLGNAIANGDFVHYPDEKWFPLPEDDRLPAGLLDDSLRTFYDPDGDLSADDLIDLQSGNAERGICALPFIRQ
SDSATVYIPVNIIGNLYVSNGMSAGNTPSEARVQGMSEIFERYVKNRIIAEAISLPAIPPETLARYPQVVEAITSLEHEG
FPILAYDASLGGRYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFAAPTFDDEEVADHTNLET
HFIDSSGALSWDLFKADADYPFVDWNFSGSSEQEFATLMALFARDGQEVYIADYRHLGVDACRILAPGMSDIYPAEDLLL
ANNSMGAGLRTTLLQLPDSEWEEEEYLQLLARLDDEGMDDFTRVRELLGIVCDSTSAWHTLRIGELKALLALAGGDLEQA
LIWTEWTQEFNASVFSAERAAFYRCLHTLLLLAMEEQRDPDQYMEAFARMYGTDILETVLASLNGDLRFHGLTAVDDAFS
ALPAHRAMLAAYEKLQQAKRRFWQA

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=584, Percent_Identity=76.027397260274, Blast_Score=928, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65214; Mature: 65082

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFIPGKDAALEDSIDRFQQQLQALGFNIEEASWLNPVPHVWSVHIRDRDCPQCFTNG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCC
KGASKKAALASALGEYVERLSTNYFFADFYLGNAIANGDFVHYPDEKWFPLPEDDRLPAG
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCEEECCCCCCCCCCCCCCCCCC
LLDDSLRTFYDPDGDLSADDLIDLQSGNAERGICALPFIRQSDSATVYIPVNIIGNLYVS
HHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCEEECCCEECCCCCEEEEEEEEEEEEHEE
NGMSAGNTPSEARVQGMSEIFERYVKNRIIAEAISLPAIPPETLARYPQVVEAITSLEHE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPILAYDASLGGRYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
CCEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
DVFAAPTFDDEEVADHTNLETHFIDSSGALSWDLFKADADYPFVDWNFSGSSEQEFATLM
EEEECCCCCCHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHH
ALFARDGQEVYIADYRHLGVDACRILAPGMSDIYPAEDLLLANNSMGAGLRTTLLQLPDS
HHHHCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCC
EWEEEEYLQLLARLDDEGMDDFTRVRELLGIVCDSTSAWHTLRIGELKALLALAGGDLEQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHH
ALIWTEWTQEFNASVFSAERAAFYRCLHTLLLLAMEEQRDPDQYMEAFARMYGTDILETV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHH
LASLNGDLRFHGLTAVDDAFSALPAHRAMLAAYEKLQQAKRRFWQA
HHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTFIPGKDAALEDSIDRFQQQLQALGFNIEEASWLNPVPHVWSVHIRDRDCPQCFTNG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCC
KGASKKAALASALGEYVERLSTNYFFADFYLGNAIANGDFVHYPDEKWFPLPEDDRLPAG
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCEEECCCCCCCCCCCCCCCCCC
LLDDSLRTFYDPDGDLSADDLIDLQSGNAERGICALPFIRQSDSATVYIPVNIIGNLYVS
HHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCEEECCCEECCCCCEEEEEEEEEEEEHEE
NGMSAGNTPSEARVQGMSEIFERYVKNRIIAEAISLPAIPPETLARYPQVVEAITSLEHE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPILAYDASLGGRYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
CCEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
DVFAAPTFDDEEVADHTNLETHFIDSSGALSWDLFKADADYPFVDWNFSGSSEQEFATLM
EEEECCCCCCHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHH
ALFARDGQEVYIADYRHLGVDACRILAPGMSDIYPAEDLLLANNSMGAGLRTTLLQLPDS
HHHHCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCC
EWEEEEYLQLLARLDDEGMDDFTRVRELLGIVCDSTSAWHTLRIGELKALLALAGGDLEQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHH
ALIWTEWTQEFNASVFSAERAAFYRCLHTLLLLAMEEQRDPDQYMEAFARMYGTDILETV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHH
LASLNGDLRFHGLTAVDDAFSALPAHRAMLAAYEKLQQAKRRFWQA
HHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]